RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 RGS12O14924 1447 aa10.02□□□□□ -0.81
RACGAP1-223ENST00000551260 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
RACGAP1-223ENST00000551260 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
RACGAP1-223ENST00000551260 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
RACGAP1-223ENST00000551260 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
RACGAP1-223ENST00000551260 CEP152O94986 1710 aa10.01□□□□□ -0.81
RACGAP1-223ENST00000551260 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
RACGAP1-223ENST00000551260 LTKP29376 864 aa10□□□□□ -0.81
RACGAP1-223ENST00000551260 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
RACGAP1-223ENST00000551260 TIAM1Q13009 1591 aa10□□□□□ -0.81
RACGAP1-223ENST00000551260 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
RACGAP1-223ENST00000551260 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
RACGAP1-223ENST00000551260 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
RACGAP1-223ENST00000551260 EP400Q96L91 3159 aa9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 KIF3BO15066 747 aa9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 VASPP50552 380 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 NUTM2DQ5VT03 806 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
RACGAP1-223ENST00000551260 LRP5O75197 1615 aa9.97□□□□□ -0.81
RACGAP1-223ENST00000551260 AFF2P51816 1311 aa9.97□□□□□ -0.81
RACGAP1-223ENST00000551260 SPATA31A6Q5VVP1 1343 aa9.97□□□□□ -0.81
RACGAP1-223ENST00000551260 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
RACGAP1-223ENST00000551260 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 DHX29Q7Z478 1369 aaKnown RBP9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 KIAA1107Q9UPP5 1409 aa9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 ARHGAP23Q9P227 1491 aa9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 SLIT1O75093 1534 aa9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 DIP2AQ14689 1571 aa9.96□□□□□ -0.82
RACGAP1-223ENST00000551260 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 SLAIN2Q9P270 581 aa9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 ERVK-7P63135 1459 aa9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 PRDM15P57071 1507 aaPredicted RBP9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 PIK3C2BO00750 1634 aa9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 CHD2O14647 1828 aaKnown RBP9.95□□□□□ -0.82
RACGAP1-223ENST00000551260 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
RACGAP1-223ENST00000551260 NWD1Q149M9 1564 aa9.94□□□□□ -0.82
RACGAP1-223ENST00000551260 PLEKHH2Q8IVE3 1493 aa9.94□□□□□ -0.82
RACGAP1-223ENST00000551260 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
RACGAP1-223ENST00000551260 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
RACGAP1-223ENST00000551260 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.93□□□□□ -0.82
RACGAP1-223ENST00000551260 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
RACGAP1-223ENST00000551260 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
RACGAP1-223ENST00000551260 ABCC3O15438 1527 aa9.92□□□□□ -0.82
RACGAP1-223ENST00000551260 TET3O43151 1660 aa9.92□□□□□ -0.82
RACGAP1-223ENST00000551260 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 MYO5BQ9ULV0 1848 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 MSH6P52701 1360 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 KCNA6P17658 529 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 QTRT2Q9H974 415 aaKnown RBP9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
RACGAP1-223ENST00000551260 SLC26A8Q96RN1 970 aa9.9□□□□□ -0.82
RACGAP1-223ENST00000551260 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.82
RACGAP1-223ENST00000551260 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 RBM6P78332 1123 aaKnown RBP9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 RTEL1-TNFRSF6BF6WH68 1400 aa9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
RACGAP1-223ENST00000551260 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
RACGAP1-223ENST00000551260 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
RACGAP1-223ENST00000551260 NHSL1Q5SYE7 1610 aa9.87□□□□□ -0.83
RACGAP1-223ENST00000551260 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
RACGAP1-223ENST00000551260 EID1Q9Y6B2 187 aa9.87□□□□□ -0.83
RACGAP1-223ENST00000551260 CASKIN1Q8WXD9 1431 aa9.87□□□□□ -0.83
RACGAP1-223ENST00000551260 CCNB3Q8WWL7 1395 aa9.87□□□□□ -0.83
RACGAP1-223ENST00000551260 NUBP1P53384 320 aa9.86□□□□□ -0.83
RACGAP1-223ENST00000551260 RASEFQ8IZ41 740 aa9.85□□□□□ -0.83
RACGAP1-223ENST00000551260 TMEM2Q9UHN6 1383 aa9.85□□□□□ -0.83
RACGAP1-223ENST00000551260 EEA1Q15075 1411 aa9.84□□□□□ -0.83
RACGAP1-223ENST00000551260 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
RACGAP1-223ENST00000551260 IFFO2Q5TF58 517 aa9.84□□□□□ -0.83
RACGAP1-223ENST00000551260 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
RACGAP1-223ENST00000551260 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
RACGAP1-223ENST00000551260 EIF2AK4Q9P2K8 1649 aaKnown RBP9.82□□□□□ -0.84
RACGAP1-223ENST00000551260 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
RACGAP1-223ENST00000551260 CCDC141Q6ZP82 1450 aa9.82□□□□□ -0.84
RACGAP1-223ENST00000551260 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
RACGAP1-223ENST00000551260 DEFB132Q7Z7B7 95 aa9.81□□□□□ -0.84
RACGAP1-223ENST00000551260 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
RACGAP1-223ENST00000551260 FYCO1Q9BQS8 1478 aa9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 BRINP3Q76B58 766 aa9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 NGLY1Q96IV0 654 aa9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
RACGAP1-223ENST00000551260 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
RACGAP1-223ENST00000551260 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
RACGAP1-223ENST00000551260 YY1P25490 414 aa9.79□□□□□ -0.84
RACGAP1-223ENST00000551260 C14orf37Q86TY3 774 aa9.79□□□□□ -0.84
RACGAP1-223ENST00000551260 SETD5Q9C0A6 1442 aa9.79□□□□□ -0.84
RACGAP1-223ENST00000551260 GABBR2O75899 941 aa9.78□□□□□ -0.84
RACGAP1-223ENST00000551260 CCDC125Q86Z20 511 aa9.78□□□□□ -0.84
RACGAP1-223ENST00000551260 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
RACGAP1-223ENST00000551260 BCANQ96GW7 911 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms