RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
CPSF6-206ENST00000550987 TMEM259Q4ZIN3 620 aa9.53□□□□□ -0.88
CPSF6-206ENST00000550987 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
CPSF6-206ENST00000550987 SULF1Q8IWU6 871 aa9.53□□□□□ -0.88
CPSF6-206ENST00000550987 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
CPSF6-206ENST00000550987 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
CPSF6-206ENST00000550987 RFC5P40937 340 aa9.52□□□□□ -0.89
CPSF6-206ENST00000550987 BANK1Q8NDB2 785 aa9.52□□□□□ -0.89
CPSF6-206ENST00000550987 POM121Q96HA1 1249 aa9.52□□□□□ -0.89
CPSF6-206ENST00000550987 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
CPSF6-206ENST00000550987 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
CPSF6-206ENST00000550987 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
CPSF6-206ENST00000550987 PTPREP23469 700 aa9.5□□□□□ -0.89
CPSF6-206ENST00000550987 POTEHQ6S545 545 aa9.5□□□□□ -0.89
CPSF6-206ENST00000550987 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
CPSF6-206ENST00000550987 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
CPSF6-206ENST00000550987 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
CPSF6-206ENST00000550987 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
CPSF6-206ENST00000550987 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
CPSF6-206ENST00000550987 COL9A1P20849 921 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 GPR153Q6NV75 609 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 EYA1Q99502 592 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 PRM3Q9NNZ6 103 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
CPSF6-206ENST00000550987 ARAP1Q96P48 1450 aa9.48□□□□□ -0.89
CPSF6-206ENST00000550987 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
CPSF6-206ENST00000550987 DNAJB2P25686 324 aa9.48□□□□□ -0.89
CPSF6-206ENST00000550987 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-206ENST00000550987 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
CPSF6-206ENST00000550987 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
CPSF6-206ENST00000550987 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
CPSF6-206ENST00000550987 CD46P15529 392 aa9.47□□□□□ -0.89
CPSF6-206ENST00000550987 SP7Q8TDD2 431 aaPredicted RBP9.47□□□□□ -0.89
CPSF6-206ENST00000550987 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
CPSF6-206ENST00000550987 FAM198AQ9UFP1 575 aa9.47□□□□□ -0.89
CPSF6-206ENST00000550987 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-206ENST00000550987 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-206ENST00000550987 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-206ENST00000550987 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
CPSF6-206ENST00000550987 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 TATDN2Q93075 761 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
CPSF6-206ENST00000550987 SPTLC1O15269 473 aa9.45□□□□□ -0.9
CPSF6-206ENST00000550987 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
CPSF6-206ENST00000550987 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
CPSF6-206ENST00000550987 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
CPSF6-206ENST00000550987 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
CPSF6-206ENST00000550987 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
CPSF6-206ENST00000550987 AP1G2O75843 785 aa9.43□□□□□ -0.9
CPSF6-206ENST00000550987 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
CPSF6-206ENST00000550987 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
CPSF6-206ENST00000550987 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
CPSF6-206ENST00000550987 NDUFV2P19404 249 aa9.42□□□□□ -0.9
CPSF6-206ENST00000550987 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
CPSF6-206ENST00000550987 GDPD2Q9HCC8 539 aa9.42□□□□□ -0.9
CPSF6-206ENST00000550987 SNPHO15079 494 aa9.41□□□□□ -0.9
CPSF6-206ENST00000550987 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
CPSF6-206ENST00000550987 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
CPSF6-206ENST00000550987 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
CPSF6-206ENST00000550987 SMAPO00193 183 aa9.4□□□□□ -0.9
CPSF6-206ENST00000550987 HRCP23327 699 aa9.4□□□□□ -0.9
CPSF6-206ENST00000550987 GJA5P36382 358 aa9.4□□□□□ -0.9
CPSF6-206ENST00000550987 ABL2P42684 1182 aa9.4□□□□□ -0.9
CPSF6-206ENST00000550987 KDM4AO75164 1064 aa9.39□□□□□ -0.91
CPSF6-206ENST00000550987 HDGFP51858 240 aaKnown RBP9.39□□□□□ -0.91
CPSF6-206ENST00000550987 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-206ENST00000550987 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
CPSF6-206ENST00000550987 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
CPSF6-206ENST00000550987 LILRB3O75022 631 aa9.38□□□□□ -0.91
CPSF6-206ENST00000550987 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
CPSF6-206ENST00000550987 QPCTQ16769 361 aa9.38□□□□□ -0.91
CPSF6-206ENST00000550987 NESP48681 1621 aa9.38□□□□□ -0.91
CPSF6-206ENST00000550987 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
CPSF6-206ENST00000550987 USP46P62068 366 aa9.37□□□□□ -0.91
CPSF6-206ENST00000550987 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
CPSF6-206ENST00000550987 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
CPSF6-206ENST00000550987 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
CPSF6-206ENST00000550987 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
CPSF6-206ENST00000550987 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
CPSF6-206ENST00000550987 PLSCR2Q9NRY7 297 aa9.36□□□□□ -0.91
CPSF6-206ENST00000550987 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
CPSF6-206ENST00000550987 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
CPSF6-206ENST00000550987 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
CPSF6-206ENST00000550987 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
CPSF6-206ENST00000550987 FDX1P10109 184 aa9.34□□□□□ -0.91
CPSF6-206ENST00000550987 GCGRP47871 477 aa9.34□□□□□ -0.91
CPSF6-206ENST00000550987 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
CPSF6-206ENST00000550987 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
CPSF6-206ENST00000550987 USP17L8P0C7I0 530 aa9.33□□□□□ -0.92
CPSF6-206ENST00000550987 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-206ENST00000550987 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CPSF6-206ENST00000550987 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
CPSF6-206ENST00000550987 HOXA2O43364 376 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms