RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
PFDN5-210ENST00000550513 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
PFDN5-210ENST00000550513 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
PFDN5-210ENST00000550513 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
PFDN5-210ENST00000550513 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
PFDN5-210ENST00000550513 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
PFDN5-210ENST00000550513 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
PFDN5-210ENST00000550513 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
PFDN5-210ENST00000550513 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
PFDN5-210ENST00000550513 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
PFDN5-210ENST00000550513 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
PFDN5-210ENST00000550513 PLEKHG1Q9ULL1 1385 aa16.74■□□□□ 0.27
PFDN5-210ENST00000550513 KCNA6P17658 529 aa16.73■□□□□ 0.27
PFDN5-210ENST00000550513 FAM135BQ49AJ0 1406 aa16.71■□□□□ 0.27
PFDN5-210ENST00000550513 BCANQ96GW7 911 aa16.71■□□□□ 0.27
PFDN5-210ENST00000550513 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
PFDN5-210ENST00000550513 KIF1BO60333 1816 aa16.7■□□□□ 0.26
PFDN5-210ENST00000550513 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
PFDN5-210ENST00000550513 MSH6P52701 1360 aa16.69■□□□□ 0.26
PFDN5-210ENST00000550513 TRPM2O94759 1503 aa16.69■□□□□ 0.26
PFDN5-210ENST00000550513 NRXN3Q9Y4C0 1643 aa16.68■□□□□ 0.26
PFDN5-210ENST00000550513 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
PFDN5-210ENST00000550513 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
PFDN5-210ENST00000550513 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
PFDN5-210ENST00000550513 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
PFDN5-210ENST00000550513 NUP155O75694 1391 aa16.65■□□□□ 0.26
PFDN5-210ENST00000550513 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
PFDN5-210ENST00000550513 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
PFDN5-210ENST00000550513 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
PFDN5-210ENST00000550513 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
PFDN5-210ENST00000550513 ITGAEP38570 1179 aa16.64■□□□□ 0.25
PFDN5-210ENST00000550513 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
PFDN5-210ENST00000550513 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
PFDN5-210ENST00000550513 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
PFDN5-210ENST00000550513 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
PFDN5-210ENST00000550513 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
PFDN5-210ENST00000550513 NCOA3Q9Y6Q9 1424 aa16.61■□□□□ 0.25
PFDN5-210ENST00000550513 AHDC1Q5TGY3 1603 aaPredicted RBP16.6■□□□□ 0.25
PFDN5-210ENST00000550513 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
PFDN5-210ENST00000550513 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
PFDN5-210ENST00000550513 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
PFDN5-210ENST00000550513 NEXMIFQ5QGS0 1516 aa16.59■□□□□ 0.25
PFDN5-210ENST00000550513 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.24
PFDN5-210ENST00000550513 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
PFDN5-210ENST00000550513 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
PFDN5-210ENST00000550513 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
PFDN5-210ENST00000550513 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
PFDN5-210ENST00000550513 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
PFDN5-210ENST00000550513 PPLO60437 1756 aa16.56■□□□□ 0.24
PFDN5-210ENST00000550513 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
PFDN5-210ENST00000550513 JCADQ9P266 1359 aa16.54■□□□□ 0.24
PFDN5-210ENST00000550513 DCCP43146 1447 aa16.53■□□□□ 0.24
PFDN5-210ENST00000550513 NAIPQ13075 1403 aa16.53■□□□□ 0.24
PFDN5-210ENST00000550513 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
PFDN5-210ENST00000550513 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
PFDN5-210ENST00000550513 LRP6O75581 1613 aa16.51■□□□□ 0.23
PFDN5-210ENST00000550513 ATF3P18847 181 aa16.5■□□□□ 0.23
PFDN5-210ENST00000550513 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
PFDN5-210ENST00000550513 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
PFDN5-210ENST00000550513 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
PFDN5-210ENST00000550513 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
PFDN5-210ENST00000550513 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
PFDN5-210ENST00000550513 MST1RQ04912 1400 aa16.46■□□□□ 0.23
PFDN5-210ENST00000550513 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
PFDN5-210ENST00000550513 POTEAQ6S8J7 498 aa16.46■□□□□ 0.23
PFDN5-210ENST00000550513 METP08581 1390 aa16.46■□□□□ 0.23
PFDN5-210ENST00000550513 SPATA31A6Q5VVP1 1343 aa16.45■□□□□ 0.22
PFDN5-210ENST00000550513 LAMC1P11047 1609 aa16.45■□□□□ 0.22
PFDN5-210ENST00000550513 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
PFDN5-210ENST00000550513 BRINP3Q76B58 766 aa16.42■□□□□ 0.22
PFDN5-210ENST00000550513 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
PFDN5-210ENST00000550513 KNDC1Q76NI1 1749 aa16.4■□□□□ 0.22
PFDN5-210ENST00000550513 PRAG1Q86YV5 1406 aa16.39■□□□□ 0.21
PFDN5-210ENST00000550513 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
PFDN5-210ENST00000550513 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
PFDN5-210ENST00000550513 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
PFDN5-210ENST00000550513 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
PFDN5-210ENST00000550513 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
PFDN5-210ENST00000550513 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
PFDN5-210ENST00000550513 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
PFDN5-210ENST00000550513 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
PFDN5-210ENST00000550513 VGFO15240 615 aaPredicted RBP16.33■□□□□ 0.2
PFDN5-210ENST00000550513 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
PFDN5-210ENST00000550513 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
PFDN5-210ENST00000550513 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
PFDN5-210ENST00000550513 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
PFDN5-210ENST00000550513 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
PFDN5-210ENST00000550513 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
PFDN5-210ENST00000550513 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
PFDN5-210ENST00000550513 FMN2Q9NZ56 1722 aa16.31■□□□□ 0.2
PFDN5-210ENST00000550513 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
PFDN5-210ENST00000550513 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
PFDN5-210ENST00000550513 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
PFDN5-210ENST00000550513 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
PFDN5-210ENST00000550513 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
PFDN5-210ENST00000550513 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
PFDN5-210ENST00000550513 AFF2P51816 1311 aa16.27■□□□□ 0.2
PFDN5-210ENST00000550513 FOXD1Q16676 465 aa16.27■□□□□ 0.2
PFDN5-210ENST00000550513 TECPR2O15040 1411 aa16.26■□□□□ 0.19
PFDN5-210ENST00000550513 PIK3C2GO75747 1445 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms