RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 IDI1Q13907 227 aa28.61■■■□□ 2.17
PRDM4-205ENST00000550376 PER1O15534 1290 aaPredicted RBP28.6■■■□□ 2.17
PRDM4-205ENST00000550376 CC2D1BQ5T0F9 858 aaKnown RBP28.6■■■□□ 2.17
PRDM4-205ENST00000550376 TMEM132EQ6IEE7 984 aa28.6■■■□□ 2.17
PRDM4-205ENST00000550376 SIGLEC1Q9BZZ2 1709 aa28.59■■■□□ 2.17
PRDM4-205ENST00000550376 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
PRDM4-205ENST00000550376 CAMSAP1Q5T5Y3 1602 aa28.57■■■□□ 2.16
PRDM4-205ENST00000550376 TMC1Q8TDI8 760 aa28.57■■■□□ 2.16
PRDM4-205ENST00000550376 TRAK1Q9UPV9 953 aa28.55■■■□□ 2.16
PRDM4-205ENST00000550376 ADGRB3O60242 1522 aa28.54■■■□□ 2.16
PRDM4-205ENST00000550376 PELP1Q8IZL8 1130 aaKnown RBP28.53■■■□□ 2.16
PRDM4-205ENST00000550376 BCANQ96GW7 911 aa28.53■■■□□ 2.16
PRDM4-205ENST00000550376 MYOM2P54296 1465 aa28.52■■■□□ 2.16
PRDM4-205ENST00000550376 IQGAP1P46940 1657 aa28.52■■■□□ 2.16
PRDM4-205ENST00000550376 FKBP8Q14318 412 aa28.52■■■□□ 2.16
PRDM4-205ENST00000550376 SYNMO15061 1565 aa28.51■■■□□ 2.15
PRDM4-205ENST00000550376 NEURL4Q96JN8 1562 aa28.49■■■□□ 2.15
PRDM4-205ENST00000550376 PNISRQ8TF01 805 aaKnown RBP28.49■■■□□ 2.15
PRDM4-205ENST00000550376 ZMYM4Q5VZL5 1548 aa28.48■■■□□ 2.15
PRDM4-205ENST00000550376 RALBP1Q15311 655 aa28.48■■■□□ 2.15
PRDM4-205ENST00000550376 MYBBP1AQ9BQG0 1328 aaKnown RBP28.47■■■□□ 2.15
PRDM4-205ENST00000550376 KTN1Q86UP2 1357 aaKnown RBP28.47■■■□□ 2.15
PRDM4-205ENST00000550376 C14orf93Q9H972 538 aaKnown RBP28.47■■■□□ 2.15
PRDM4-205ENST00000550376 IFT172Q9UG01 1749 aa28.46■■■□□ 2.15
PRDM4-205ENST00000550376 KIF13AQ9H1H9 1805 aa28.45■■■□□ 2.14
PRDM4-205ENST00000550376 NRXN1Q9ULB1 1477 aa28.45■■■□□ 2.14
PRDM4-205ENST00000550376 EIF3AQ14152 1382 aaKnown RBP28.44■■■□□ 2.14
PRDM4-205ENST00000550376 ARHGAP31Q2M1Z3 1444 aa28.44■■■□□ 2.14
PRDM4-205ENST00000550376 PIK3C2GO75747 1445 aa28.42■■■□□ 2.14
PRDM4-205ENST00000550376 SLC52A1Q9NWF4 448 aa28.42■■■□□ 2.14
PRDM4-205ENST00000550376 RPGRIP1LQ68CZ1 1315 aa28.41■■■□□ 2.14
PRDM4-205ENST00000550376 PARD3Q8TEW0 1356 aa28.4■■■□□ 2.14
PRDM4-205ENST00000550376 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
PRDM4-205ENST00000550376 PPLO60437 1756 aa28.39■■■□□ 2.14
PRDM4-205ENST00000550376 KIAA1210Q9ULL0 1709 aa28.39■■■□□ 2.13
PRDM4-205ENST00000550376 IRX6P78412 446 aaPredicted RBP28.38■■■□□ 2.13
PRDM4-205ENST00000550376 CDCA8Q53HL2 280 aa28.38■■■□□ 2.13
PRDM4-205ENST00000550376 KNSTRNQ9Y448 316 aa28.38■■■□□ 2.13
PRDM4-205ENST00000550376 SAFB2Q14151 953 aaKnown RBP eCLIP28.38■■■□□ 2.13
PRDM4-205ENST00000550376 STAG3Q9UJ98 1225 aa28.38■■■□□ 2.13
PRDM4-205ENST00000550376 STK26Q9P289 416 aa28.37■■■□□ 2.13
PRDM4-205ENST00000550376 PIK3C2BO00750 1634 aa28.36■■■□□ 2.13
PRDM4-205ENST00000550376 ZBED9Q6R2W3 1325 aa28.36■■■□□ 2.13
PRDM4-205ENST00000550376 CENPJQ9HC77 1338 aaPredicted RBP28.36■■■□□ 2.13
PRDM4-205ENST00000550376 NLRP13Q86W25 1043 aa28.36■■■□□ 2.13
PRDM4-205ENST00000550376 BRD4O60885 1362 aaPredicted RBP28.34■■■□□ 2.13
PRDM4-205ENST00000550376 SALL2Q9Y467 1007 aaPredicted RBP28.34■■■□□ 2.13
PRDM4-205ENST00000550376 ZC3H13Q5T200 1668 aaKnown RBP28.34■■■□□ 2.13
PRDM4-205ENST00000550376 ERVK-7P63135 1459 aa28.33■■■□□ 2.13
PRDM4-205ENST00000550376 NEXMIFQ5QGS0 1516 aa28.32■■■□□ 2.12
PRDM4-205ENST00000550376 NEFLP07196 543 aa28.32■■■□□ 2.12
PRDM4-205ENST00000550376 PREX1Q8TCU6 1659 aa28.32■■■□□ 2.12
PRDM4-205ENST00000550376 AMER1Q5JTC6 1135 aaPredicted RBP28.31■■■□□ 2.12
PRDM4-205ENST00000550376 ADGRB1O14514 1584 aa28.29■■■□□ 2.12
PRDM4-205ENST00000550376 MYO5BQ9ULV0 1848 aa28.29■■■□□ 2.12
PRDM4-205ENST00000550376 CARD14Q9BXL6 1004 aa28.28■■■□□ 2.12
PRDM4-205ENST00000550376 CLTCQ00610 1675 aaKnown RBP28.28■■■□□ 2.12
PRDM4-205ENST00000550376 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
PRDM4-205ENST00000550376 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
PRDM4-205ENST00000550376 AGLP35573 1532 aa28.25■■■□□ 2.11
PRDM4-205ENST00000550376 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
PRDM4-205ENST00000550376 TMEM131LA2VDJ0 1609 aa28.23■■■□□ 2.11
PRDM4-205ENST00000550376 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
PRDM4-205ENST00000550376 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
PRDM4-205ENST00000550376 PLPPR3Q6T4P5 718 aa28.22■■■□□ 2.11
PRDM4-205ENST00000550376 PPP6R1Q9UPN7 881 aa28.22■■■□□ 2.11
PRDM4-205ENST00000550376 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
PRDM4-205ENST00000550376 MYOM1P52179 1685 aa28.21■■■□□ 2.11
PRDM4-205ENST00000550376 REREQ9P2R6 1566 aa28.21■■■□□ 2.11
PRDM4-205ENST00000550376 KDM5AP29375 1690 aaKnown RBP28.2■■■□□ 2.1
PRDM4-205ENST00000550376 ARHGEF40Q8TER5 1519 aa28.2■■■□□ 2.1
PRDM4-205ENST00000550376 ZMYM3Q14202 1370 aa28.2■■■□□ 2.1
PRDM4-205ENST00000550376 CABP2Q9NPB3 220 aa28.18■■■□□ 2.1
PRDM4-205ENST00000550376 SLC24A1O60721 1099 aa28.16■■■□□ 2.1
PRDM4-205ENST00000550376 SBNO2Q9Y2G9 1366 aa28.15■■■□□ 2.1
PRDM4-205ENST00000550376 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
PRDM4-205ENST00000550376 PRAM1Q96QH2 718 aa28.13■■■□□ 2.09
PRDM4-205ENST00000550376 ASXL1Q8IXJ9 1541 aa28.13■■■□□ 2.09
PRDM4-205ENST00000550376 MINK1Q8N4C8 1332 aaPredicted RBP28.13■■■□□ 2.09
PRDM4-205ENST00000550376 QRICH2Q9H0J4 1663 aa28.13■■■□□ 2.09
PRDM4-205ENST00000550376 TNNT2P45379 298 aaPredicted RBP28.12■■■□□ 2.09
PRDM4-205ENST00000550376 ADAMTS8Q9UP79 889 aa28.12■■■□□ 2.09
PRDM4-205ENST00000550376 MYO3AQ8NEV4 1616 aa28.12■■■□□ 2.09
PRDM4-205ENST00000550376 ZFYVE9O95405 1425 aa28.12■■■□□ 2.09
PRDM4-205ENST00000550376 POGKQ9P215 609 aa28.1■■■□□ 2.09
PRDM4-205ENST00000550376 A2ML1A8K2U0 1454 aa28.1■■■□□ 2.09
PRDM4-205ENST00000550376 EVC2Q86UK5 1308 aa28.08■■■□□ 2.09
PRDM4-205ENST00000550376 SRPK2P78362 688 aaKnown RBP28.07■■■□□ 2.08
PRDM4-205ENST00000550376 NUDCQ9Y266 331 aa28.06■■■□□ 2.08
PRDM4-205ENST00000550376 SPATA31D1Q6ZQQ2 1576 aa28.06■■■□□ 2.08
PRDM4-205ENST00000550376 RIMS2Q9UQ26 1411 aa28.06■■■□□ 2.08
PRDM4-205ENST00000550376 WAPLQ7Z5K2 1190 aa28.06■■■□□ 2.08
PRDM4-205ENST00000550376 NSD3Q9BZ95 1437 aa28.05■■■□□ 2.08
PRDM4-205ENST00000550376 YTHDC2Q9H6S0 1430 aaKnown RBP28.04■■■□□ 2.08
PRDM4-205ENST00000550376 ARHGEF28Q8N1W1 1705 aaKnown RBP28.04■■■□□ 2.08
PRDM4-205ENST00000550376 CDCA7LQ96GN5 454 aa28.04■■■□□ 2.08
PRDM4-205ENST00000550376 TULP4Q9NRJ4 1543 aa28.03■■■□□ 2.08
PRDM4-205ENST00000550376 SMG6Q86US8 1419 aaKnown RBP28.03■■■□□ 2.08
PRDM4-205ENST00000550376 ALKQ9UM73 1620 aa28.02■■■□□ 2.08
PRDM4-205ENST00000550376 WDR43Q15061 677 aaKnown RBP eCLIP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms