RNA–Protein interactions for RNA: ENST00000549818.5

TUBA1C-206, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-206ENST00000549818 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
TUBA1C-206ENST00000549818 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
TUBA1C-206ENST00000549818 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
TUBA1C-206ENST00000549818 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
TUBA1C-206ENST00000549818 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
TUBA1C-206ENST00000549818 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
TUBA1C-206ENST00000549818 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
TUBA1C-206ENST00000549818 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.19
TUBA1C-206ENST00000549818 ZFYVE9O95405 1425 aa13.9□□□□□ -0.19
TUBA1C-206ENST00000549818 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
TUBA1C-206ENST00000549818 CLSPNQ9HAW4 1339 aa13.89□□□□□ -0.19
TUBA1C-206ENST00000549818 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
TUBA1C-206ENST00000549818 BCANQ96GW7 911 aa13.87□□□□□ -0.19
TUBA1C-206ENST00000549818 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 SIN3AQ96ST3 1273 aa13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 EID1Q9Y6B2 187 aa13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 MED14O60244 1454 aa13.86□□□□□ -0.19
TUBA1C-206ENST00000549818 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
TUBA1C-206ENST00000549818 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
TUBA1C-206ENST00000549818 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
TUBA1C-206ENST00000549818 HDGFP51858 240 aaKnown RBP13.83□□□□□ -0.2
TUBA1C-206ENST00000549818 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
TUBA1C-206ENST00000549818 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
TUBA1C-206ENST00000549818 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
TUBA1C-206ENST00000549818 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
TUBA1C-206ENST00000549818 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
TUBA1C-206ENST00000549818 PLEKHG1Q9ULL1 1385 aa13.81□□□□□ -0.2
TUBA1C-206ENST00000549818 CHD2O14647 1828 aaKnown RBP13.8□□□□□ -0.2
TUBA1C-206ENST00000549818 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
TUBA1C-206ENST00000549818 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
TUBA1C-206ENST00000549818 ADAMTS13Q76LX8 1427 aa13.78□□□□□ -0.2
TUBA1C-206ENST00000549818 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
TUBA1C-206ENST00000549818 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
TUBA1C-206ENST00000549818 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
TUBA1C-206ENST00000549818 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
TUBA1C-206ENST00000549818 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
TUBA1C-206ENST00000549818 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
TUBA1C-206ENST00000549818 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
TUBA1C-206ENST00000549818 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
TUBA1C-206ENST00000549818 KDM2AQ9Y2K7 1162 aa13.76□□□□□ -0.21
TUBA1C-206ENST00000549818 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
TUBA1C-206ENST00000549818 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
TUBA1C-206ENST00000549818 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
TUBA1C-206ENST00000549818 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
TUBA1C-206ENST00000549818 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
TUBA1C-206ENST00000549818 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
TUBA1C-206ENST00000549818 METP08581 1390 aa13.72□□□□□ -0.21
TUBA1C-206ENST00000549818 CPS1P31327 1500 aa13.71□□□□□ -0.21
TUBA1C-206ENST00000549818 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.21
TUBA1C-206ENST00000549818 CERKQ8TCT0 537 aa13.71□□□□□ -0.21
TUBA1C-206ENST00000549818 MYOM2P54296 1465 aa13.71□□□□□ -0.21
TUBA1C-206ENST00000549818 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
TUBA1C-206ENST00000549818 LAMC1P11047 1609 aa13.69□□□□□ -0.22
TUBA1C-206ENST00000549818 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
TUBA1C-206ENST00000549818 KCNA6P17658 529 aa13.68□□□□□ -0.22
TUBA1C-206ENST00000549818 ADRA2BP18089 450 aa13.68□□□□□ -0.22
TUBA1C-206ENST00000549818 TBX22Q9Y458 520 aa13.68□□□□□ -0.22
TUBA1C-206ENST00000549818 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
TUBA1C-206ENST00000549818 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
TUBA1C-206ENST00000549818 C14orf93Q9H972 538 aaKnown RBP13.67□□□□□ -0.22
TUBA1C-206ENST00000549818 CFAP70Q5T0N1 1121 aa13.66□□□□□ -0.22
TUBA1C-206ENST00000549818 STK26Q9P289 416 aa13.66□□□□□ -0.22
TUBA1C-206ENST00000549818 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
TUBA1C-206ENST00000549818 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
TUBA1C-206ENST00000549818 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
TUBA1C-206ENST00000549818 AMOTL2Q9Y2J4 779 aa13.65□□□□□ -0.22
TUBA1C-206ENST00000549818 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
TUBA1C-206ENST00000549818 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
TUBA1C-206ENST00000549818 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
TUBA1C-206ENST00000549818 PRAG1Q86YV5 1406 aa13.64□□□□□ -0.23
TUBA1C-206ENST00000549818 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
TUBA1C-206ENST00000549818 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
TUBA1C-206ENST00000549818 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
TUBA1C-206ENST00000549818 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
TUBA1C-206ENST00000549818 PIK3R4Q99570 1358 aa13.61□□□□□ -0.23
TUBA1C-206ENST00000549818 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
TUBA1C-206ENST00000549818 C14orf37Q86TY3 774 aa13.61□□□□□ -0.23
TUBA1C-206ENST00000549818 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
TUBA1C-206ENST00000549818 UBAP1LF5GYI3 381 aa13.6□□□□□ -0.23
TUBA1C-206ENST00000549818 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
TUBA1C-206ENST00000549818 YTHDC2Q9H6S0 1430 aaKnown RBP13.6□□□□□ -0.23
TUBA1C-206ENST00000549818 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
TUBA1C-206ENST00000549818 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
TUBA1C-206ENST00000549818 IQSEC2Q5JU85 1478 aa13.59□□□□□ -0.23
TUBA1C-206ENST00000549818 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
TUBA1C-206ENST00000549818 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
TUBA1C-206ENST00000549818 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
TUBA1C-206ENST00000549818 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
TUBA1C-206ENST00000549818 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.24
TUBA1C-206ENST00000549818 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
TUBA1C-206ENST00000549818 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
TUBA1C-206ENST00000549818 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
TUBA1C-206ENST00000549818 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
TUBA1C-206ENST00000549818 MSH6P52701 1360 aa13.56□□□□□ -0.24
TUBA1C-206ENST00000549818 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
TUBA1C-206ENST00000549818 QRICH2Q9H0J4 1663 aa13.55□□□□□ -0.24
TUBA1C-206ENST00000549818 ABCC11Q96J66 1382 aa13.55□□□□□ -0.24
TUBA1C-206ENST00000549818 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms