RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 CHGAP10645 457 aaKnown RBP29.75■■■□□ 2.35
SLC48A1-207ENST00000549243 BCANQ96GW7 911 aa29.74■■■□□ 2.35
SLC48A1-207ENST00000549243 HSPA1LP34931 641 aa29.72■■■□□ 2.35
SLC48A1-207ENST00000549243 ZFYVE9O95405 1425 aa29.71■■■□□ 2.35
SLC48A1-207ENST00000549243 RIMS2Q9UQ26 1411 aa29.71■■■□□ 2.35
SLC48A1-207ENST00000549243 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
SLC48A1-207ENST00000549243 SPHKAPQ2M3C7 1700 aa29.66■■■□□ 2.34
SLC48A1-207ENST00000549243 KCNA6P17658 529 aa29.65■■■□□ 2.34
SLC48A1-207ENST00000549243 NAIPQ13075 1403 aa29.64■■■□□ 2.34
SLC48A1-207ENST00000549243 NUTM2DQ5VT03 806 aaPredicted RBP29.64■■■□□ 2.34
SLC48A1-207ENST00000549243 PLEKHG1Q9ULL1 1385 aa29.64■■■□□ 2.33
SLC48A1-207ENST00000549243 HDGFP51858 240 aaKnown RBP29.63■■■□□ 2.33
SLC48A1-207ENST00000549243 TMEM94Q12767 1356 aa29.61■■■□□ 2.33
SLC48A1-207ENST00000549243 ILDR2Q71H61 639 aa29.6■■■□□ 2.33
SLC48A1-207ENST00000549243 RBM33Q96EV2 1170 aaKnown RBP29.6■■■□□ 2.33
SLC48A1-207ENST00000549243 NWD1Q149M9 1564 aa29.6■■■□□ 2.33
SLC48A1-207ENST00000549243 PROSER2Q86WR7 435 aaPredicted RBP29.59■■■□□ 2.33
SLC48A1-207ENST00000549243 CHD2O14647 1828 aaKnown RBP29.59■■■□□ 2.33
SLC48A1-207ENST00000549243 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.58■■■□□ 2.33
SLC48A1-207ENST00000549243 NKTRP30414 1462 aaKnown RBP29.55■■■□□ 2.32
SLC48A1-207ENST00000549243 HFM1A2PYH4 1435 aa29.53■■■□□ 2.32
SLC48A1-207ENST00000549243 TRIM52Q96A61 297 aa29.51■■■□□ 2.31
SLC48A1-207ENST00000549243 CLTCL1P53675 1640 aa29.5■■■□□ 2.31
SLC48A1-207ENST00000549243 ADAMTS13Q76LX8 1427 aa29.5■■■□□ 2.31
SLC48A1-207ENST00000549243 MED1Q15648 1581 aaPredicted RBP29.5■■■□□ 2.31
SLC48A1-207ENST00000549243 TBX22Q9Y458 520 aa29.49■■■□□ 2.31
SLC48A1-207ENST00000549243 ZNF326Q5BKZ1 582 aaKnown RBP29.47■■■□□ 2.31
SLC48A1-207ENST00000549243 DIP2AQ14689 1571 aa29.47■■■□□ 2.31
SLC48A1-207ENST00000549243 TRPM2O94759 1503 aa29.46■■■□□ 2.31
SLC48A1-207ENST00000549243 KIF1BO60333 1816 aa29.46■■■□□ 2.31
SLC48A1-207ENST00000549243 MSH6P52701 1360 aa29.42■■■□□ 2.3
SLC48A1-207ENST00000549243 ROBO1Q9Y6N7 1651 aa29.42■■■□□ 2.3
SLC48A1-207ENST00000549243 NRXN3Q9Y4C0 1643 aa29.41■■■□□ 2.3
SLC48A1-207ENST00000549243 FAM135BQ49AJ0 1406 aa29.4■■■□□ 2.3
SLC48A1-207ENST00000549243 SLC4A1APQ9BWU0 796 aaKnown RBP29.39■■■□□ 2.3
SLC48A1-207ENST00000549243 PIK3R4Q99570 1358 aa29.37■■■□□ 2.29
SLC48A1-207ENST00000549243 NEXMIFQ5QGS0 1516 aa29.36■■■□□ 2.29
SLC48A1-207ENST00000549243 SETBP1Q9Y6X0 1596 aa29.36■■■□□ 2.29
SLC48A1-207ENST00000549243 C14orf37Q86TY3 774 aa29.36■■■□□ 2.29
SLC48A1-207ENST00000549243 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
SLC48A1-207ENST00000549243 AMOTL2Q9Y2J4 779 aa29.34■■■□□ 2.29
SLC48A1-207ENST00000549243 SLAIN2Q9P270 581 aa29.32■■■□□ 2.28
SLC48A1-207ENST00000549243 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
SLC48A1-207ENST00000549243 SOCS7O14512 581 aa29.31■■■□□ 2.28
SLC48A1-207ENST00000549243 FOXD1Q16676 465 aa29.3■■■□□ 2.28
SLC48A1-207ENST00000549243 PHF23Q9BUL5 403 aaPredicted RBP29.3■■■□□ 2.28
SLC48A1-207ENST00000549243 XRN1Q8IZH2 1706 aaKnown RBP29.29■■■□□ 2.28
SLC48A1-207ENST00000549243 NCOA3Q9Y6Q9 1424 aa29.28■■■□□ 2.28
SLC48A1-207ENST00000549243 METP08581 1390 aa29.26■■■□□ 2.28
SLC48A1-207ENST00000549243 PHLPP1O60346 1717 aa29.26■■■□□ 2.27
SLC48A1-207ENST00000549243 C19orf44Q9H6X5 657 aa29.23■■■□□ 2.27
SLC48A1-207ENST00000549243 PPLO60437 1756 aa29.22■■■□□ 2.27
SLC48A1-207ENST00000549243 ATF3P18847 181 aa29.22■■■□□ 2.27
SLC48A1-207ENST00000549243 CADPS2Q86UW7 1296 aa29.2■■■□□ 2.26
SLC48A1-207ENST00000549243 MPHOSPH9Q99550 1183 aa29.19■■■□□ 2.26
SLC48A1-207ENST00000549243 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
SLC48A1-207ENST00000549243 VGFO15240 615 aaPredicted RBP29.18■■■□□ 2.26
SLC48A1-207ENST00000549243 RPGRIP1LQ68CZ1 1315 aa29.16■■■□□ 2.26
SLC48A1-207ENST00000549243 CCDC144AA2RUR9 1427 aa29.15■■■□□ 2.26
SLC48A1-207ENST00000549243 COL16A1Q07092 1604 aaPredicted RBP29.13■■■□□ 2.25
SLC48A1-207ENST00000549243 SETD5Q9C0A6 1442 aa29.12■■■□□ 2.25
SLC48A1-207ENST00000549243 NALCNQ8IZF0 1738 aa29.12■■■□□ 2.25
SLC48A1-207ENST00000549243 DCCP43146 1447 aa29.11■■■□□ 2.25
SLC48A1-207ENST00000549243 RGL3Q3MIN7 710 aa29.1■■■□□ 2.25
SLC48A1-207ENST00000549243 AHDC1Q5TGY3 1603 aaPredicted RBP29.07■■■□□ 2.24
SLC48A1-207ENST00000549243 ADGRL3Q9HAR2 1447 aa29.07■■■□□ 2.24
SLC48A1-207ENST00000549243 JCADQ9P266 1359 aa29.07■■■□□ 2.24
SLC48A1-207ENST00000549243 IFT172Q9UG01 1749 aa29.07■■■□□ 2.24
SLC48A1-207ENST00000549243 BRINP3Q76B58 766 aa29.06■■■□□ 2.24
SLC48A1-207ENST00000549243 RGS17Q9UGC6 210 aaPredicted RBP29.06■■■□□ 2.24
SLC48A1-207ENST00000549243 MST1RQ04912 1400 aa29.05■■■□□ 2.24
SLC48A1-207ENST00000549243 SPATA31E1Q6ZUB1 1445 aa29.05■■■□□ 2.24
SLC48A1-207ENST00000549243 RAB3GAP2Q9H2M9 1393 aa29.03■■■□□ 2.24
SLC48A1-207ENST00000549243 ROBO2Q9HCK4 1378 aa29.03■■■□□ 2.24
SLC48A1-207ENST00000549243 ADGRF5Q8IZF2 1346 aa29.03■■■□□ 2.24
SLC48A1-207ENST00000549243 PTCH1Q13635 1447 aa29.03■■■□□ 2.24
SLC48A1-207ENST00000549243 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
SLC48A1-207ENST00000549243 ACIN1Q9UKV3 1341 aaKnown RBP28.99■■■□□ 2.23
SLC48A1-207ENST00000549243 NHSL1Q5SYE7 1610 aa28.98■■■□□ 2.23
SLC48A1-207ENST00000549243 SHPRHQ149N8 1683 aa28.97■■■□□ 2.23
SLC48A1-207ENST00000549243 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
SLC48A1-207ENST00000549243 PRAG1Q86YV5 1406 aa28.94■■■□□ 2.22
SLC48A1-207ENST00000549243 POTEAQ6S8J7 498 aa28.93■■■□□ 2.22
SLC48A1-207ENST00000549243 LRP6O75581 1613 aa28.93■■■□□ 2.22
SLC48A1-207ENST00000549243 DDX17Q92841 729 aaKnown RBP28.92■■■□□ 2.22
SLC48A1-207ENST00000549243 STK26Q9P289 416 aa28.91■■■□□ 2.22
SLC48A1-207ENST00000549243 SPATA31A6Q5VVP1 1343 aa28.91■■■□□ 2.22
SLC48A1-207ENST00000549243 C1orf167Q5SNV9 1468 aa28.91■■■□□ 2.22
SLC48A1-207ENST00000549243 PIK3C2GO75747 1445 aa28.89■■■□□ 2.22
SLC48A1-207ENST00000549243 MEX3CQ5U5Q3 659 aaKnown RBP28.88■■■□□ 2.21
SLC48A1-207ENST00000549243 TMEM132EQ6IEE7 984 aa28.88■■■□□ 2.21
SLC48A1-207ENST00000549243 NUTM2BA6NNL0 878 aaPredicted RBP28.86■■■□□ 2.21
SLC48A1-207ENST00000549243 NUTM2EB1AL46 878 aaPredicted RBP28.86■■■□□ 2.21
SLC48A1-207ENST00000549243 NUTM2AQ8IVF1 878 aaPredicted RBP28.86■■■□□ 2.21
SLC48A1-207ENST00000549243 KNDC1Q76NI1 1749 aa28.85■■■□□ 2.21
SLC48A1-207ENST00000549243 ORAI2Q96SN7 254 aa28.84■■■□□ 2.21
SLC48A1-207ENST00000549243 LRPPRCP42704 1394 aaKnown RBP28.84■■■□□ 2.21
SLC48A1-207ENST00000549243 WAPLQ7Z5K2 1190 aa28.83■■■□□ 2.21
SLC48A1-207ENST00000549243 LRRC59Q96AG4 307 aaKnown RBP28.82■■■□□ 2.2
SLC48A1-207ENST00000549243 TECPR2O15040 1411 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms