RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 PPP1R15AO75807 674 aaPredicted RBP22.93■■□□□ 1.26
ARFGAP1-221ENST00000549047 HDGFP51858 240 aaKnown RBP22.93■■□□□ 1.26
ARFGAP1-221ENST00000549047 BCANQ96GW7 911 aa22.93■■□□□ 1.26
ARFGAP1-221ENST00000549047 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
ARFGAP1-221ENST00000549047 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
ARFGAP1-221ENST00000549047 KCNA6P17658 529 aa22.9■■□□□ 1.26
ARFGAP1-221ENST00000549047 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.9■■□□□ 1.26
ARFGAP1-221ENST00000549047 ALKQ9UM73 1620 aa22.88■■□□□ 1.25
ARFGAP1-221ENST00000549047 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
ARFGAP1-221ENST00000549047 NUTM2DQ5VT03 806 aaPredicted RBP22.87■■□□□ 1.25
ARFGAP1-221ENST00000549047 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
ARFGAP1-221ENST00000549047 HSPA1LP34931 641 aa22.85■■□□□ 1.25
ARFGAP1-221ENST00000549047 TMEM94Q12767 1356 aa22.84■■□□□ 1.25
ARFGAP1-221ENST00000549047 SPHKAPQ2M3C7 1700 aa22.83■■□□□ 1.25
ARFGAP1-221ENST00000549047 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
ARFGAP1-221ENST00000549047 PROSER2Q86WR7 435 aaPredicted RBP22.82■■□□□ 1.24
ARFGAP1-221ENST00000549047 TBX22Q9Y458 520 aa22.82■■□□□ 1.24
ARFGAP1-221ENST00000549047 NWD1Q149M9 1564 aa22.81■■□□□ 1.24
ARFGAP1-221ENST00000549047 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
ARFGAP1-221ENST00000549047 TRPM2O94759 1503 aa22.81■■□□□ 1.24
ARFGAP1-221ENST00000549047 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
ARFGAP1-221ENST00000549047 SLC4A1APQ9BWU0 796 aaKnown RBP22.8■■□□□ 1.24
ARFGAP1-221ENST00000549047 ADAMTS13Q76LX8 1427 aa22.8■■□□□ 1.24
ARFGAP1-221ENST00000549047 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
ARFGAP1-221ENST00000549047 CLTCL1P53675 1640 aa22.77■■□□□ 1.24
ARFGAP1-221ENST00000549047 XIRP1Q702N8 1843 aaKnown RBP22.76■■□□□ 1.23
ARFGAP1-221ENST00000549047 DIP2AQ14689 1571 aa22.75■■□□□ 1.23
ARFGAP1-221ENST00000549047 PIK3R4Q99570 1358 aa22.73■■□□□ 1.23
ARFGAP1-221ENST00000549047 MSH6P52701 1360 aa22.7■■□□□ 1.22
ARFGAP1-221ENST00000549047 CHD2O14647 1828 aaKnown RBP22.69■■□□□ 1.22
ARFGAP1-221ENST00000549047 FOXD1Q16676 465 aa22.69■■□□□ 1.22
ARFGAP1-221ENST00000549047 SETBP1Q9Y6X0 1596 aa22.68■■□□□ 1.22
ARFGAP1-221ENST00000549047 NEXMIFQ5QGS0 1516 aa22.68■■□□□ 1.22
ARFGAP1-221ENST00000549047 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
ARFGAP1-221ENST00000549047 PTPRUQ92729 1446 aa22.66■■□□□ 1.22
ARFGAP1-221ENST00000549047 MPHOSPH9Q99550 1183 aa22.66■■□□□ 1.22
ARFGAP1-221ENST00000549047 AMOTL2Q9Y2J4 779 aa22.66■■□□□ 1.22
ARFGAP1-221ENST00000549047 NRXN3Q9Y4C0 1643 aa22.66■■□□□ 1.22
ARFGAP1-221ENST00000549047 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
ARFGAP1-221ENST00000549047 ILDR2Q71H61 639 aa22.64■■□□□ 1.21
ARFGAP1-221ENST00000549047 C14orf37Q86TY3 774 aa22.64■■□□□ 1.21
ARFGAP1-221ENST00000549047 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.21
ARFGAP1-221ENST00000549047 METP08581 1390 aa22.63■■□□□ 1.21
ARFGAP1-221ENST00000549047 KIF1BO60333 1816 aa22.62■■□□□ 1.21
ARFGAP1-221ENST00000549047 VGFO15240 615 aaPredicted RBP22.61■■□□□ 1.21
ARFGAP1-221ENST00000549047 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
ARFGAP1-221ENST00000549047 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
ARFGAP1-221ENST00000549047 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
ARFGAP1-221ENST00000549047 MED1Q15648 1581 aaPredicted RBP22.6■■□□□ 1.21
ARFGAP1-221ENST00000549047 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
ARFGAP1-221ENST00000549047 C19orf44Q9H6X5 657 aa22.59■■□□□ 1.21
ARFGAP1-221ENST00000549047 ROBO1Q9Y6N7 1651 aa22.57■■□□□ 1.2
ARFGAP1-221ENST00000549047 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
ARFGAP1-221ENST00000549047 RAB3GAP2Q9H2M9 1393 aa22.56■■□□□ 1.2
ARFGAP1-221ENST00000549047 CADPS2Q86UW7 1296 aa22.56■■□□□ 1.2
ARFGAP1-221ENST00000549047 ATF3P18847 181 aa22.55■■□□□ 1.2
ARFGAP1-221ENST00000549047 SPATA31E1Q6ZUB1 1445 aa22.53■■□□□ 1.2
ARFGAP1-221ENST00000549047 RGL3Q3MIN7 710 aa22.52■■□□□ 1.2
ARFGAP1-221ENST00000549047 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
ARFGAP1-221ENST00000549047 DCCP43146 1447 aa22.49■■□□□ 1.19
ARFGAP1-221ENST00000549047 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
ARFGAP1-221ENST00000549047 PPLO60437 1756 aa22.48■■□□□ 1.19
ARFGAP1-221ENST00000549047 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
ARFGAP1-221ENST00000549047 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
ARFGAP1-221ENST00000549047 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
ARFGAP1-221ENST00000549047 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
ARFGAP1-221ENST00000549047 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.19
ARFGAP1-221ENST00000549047 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
ARFGAP1-221ENST00000549047 SOCS7O14512 581 aa22.44■■□□□ 1.18
ARFGAP1-221ENST00000549047 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
ARFGAP1-221ENST00000549047 BRINP3Q76B58 766 aa22.43■■□□□ 1.18
ARFGAP1-221ENST00000549047 MST1RQ04912 1400 aa22.42■■□□□ 1.18
ARFGAP1-221ENST00000549047 PHLPP1O60346 1717 aa22.42■■□□□ 1.18
ARFGAP1-221ENST00000549047 JCADQ9P266 1359 aa22.4■■□□□ 1.18
ARFGAP1-221ENST00000549047 HRCP23327 699 aa22.4■■□□□ 1.18
ARFGAP1-221ENST00000549047 PIK3C2GO75747 1445 aa22.39■■□□□ 1.17
ARFGAP1-221ENST00000549047 COL16A1Q07092 1604 aaPredicted RBP22.39■■□□□ 1.17
ARFGAP1-221ENST00000549047 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.17
ARFGAP1-221ENST00000549047 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
ARFGAP1-221ENST00000549047 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
ARFGAP1-221ENST00000549047 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
ARFGAP1-221ENST00000549047 STK26Q9P289 416 aa22.35■■□□□ 1.17
ARFGAP1-221ENST00000549047 TMEM132EQ6IEE7 984 aa22.34■■□□□ 1.17
ARFGAP1-221ENST00000549047 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
ARFGAP1-221ENST00000549047 LRPPRCP42704 1394 aaKnown RBP22.34■■□□□ 1.17
ARFGAP1-221ENST00000549047 TECPR2O15040 1411 aa22.32■■□□□ 1.16
ARFGAP1-221ENST00000549047 MYOM2P54296 1465 aa22.32■■□□□ 1.16
ARFGAP1-221ENST00000549047 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
ARFGAP1-221ENST00000549047 NRXN1Q9ULB1 1477 aa22.32■■□□□ 1.16
ARFGAP1-221ENST00000549047 ABCC11Q96J66 1382 aa22.31■■□□□ 1.16
ARFGAP1-221ENST00000549047 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
ARFGAP1-221ENST00000549047 SPATA31A6Q5VVP1 1343 aa22.3■■□□□ 1.16
ARFGAP1-221ENST00000549047 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
ARFGAP1-221ENST00000549047 WAPLQ7Z5K2 1190 aa22.28■■□□□ 1.16
ARFGAP1-221ENST00000549047 DDX17Q92841 729 aaKnown RBP22.28■■□□□ 1.16
ARFGAP1-221ENST00000549047 YTHDC2Q9H6S0 1430 aaKnown RBP22.28■■□□□ 1.16
ARFGAP1-221ENST00000549047 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
ARFGAP1-221ENST00000549047 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
ARFGAP1-221ENST00000549047 LRP6O75581 1613 aa22.25■■□□□ 1.15
ARFGAP1-221ENST00000549047 NHSL1Q5SYE7 1610 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms