RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 ADGRL1O94910 1474 aa21.3■■□□□ 1
CNOT2-209ENST00000548159 INO80Q9ULG1 1556 aaPredicted RBP21.29■■□□□ 1
CNOT2-209ENST00000548159 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
CNOT2-209ENST00000548159 CDCA8Q53HL2 280 aa21.29■■□□□ 1
CNOT2-209ENST00000548159 STAC3Q96MF2 364 aa21.29■■□□□ 1
CNOT2-209ENST00000548159 NOP58Q9Y2X3 529 aaKnown RBP21.29■■□□□ 1
CNOT2-209ENST00000548159 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
CNOT2-209ENST00000548159 ZMYM4Q5VZL5 1548 aa21.28■■□□□ 1
CNOT2-209ENST00000548159 VWDEQ8N2E2 1590 aa21.28■■□□□ 1
CNOT2-209ENST00000548159 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
CNOT2-209ENST00000548159 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
CNOT2-209ENST00000548159 CRBNQ96SW2 442 aa21.27■■□□□ 1
CNOT2-209ENST00000548159 SKAP1Q86WV1 359 aa21.27■■□□□ 1
CNOT2-209ENST00000548159 SYNMO15061 1565 aa21.25■□□□□ 0.99
CNOT2-209ENST00000548159 MROH1Q8NDA8 1641 aa21.25■□□□□ 0.99
CNOT2-209ENST00000548159 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
CNOT2-209ENST00000548159 MYOM1P52179 1685 aa21.24■□□□□ 0.99
CNOT2-209ENST00000548159 ANP32AP39687 249 aaKnown RBP21.23■□□□□ 0.99
CNOT2-209ENST00000548159 DUSP27Q5VZP5 1158 aa21.23■□□□□ 0.99
CNOT2-209ENST00000548159 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
CNOT2-209ENST00000548159 ASXL2Q76L83 1435 aa21.23■□□□□ 0.99
CNOT2-209ENST00000548159 EIF3AQ14152 1382 aaKnown RBP21.22■□□□□ 0.99
CNOT2-209ENST00000548159 IPO9Q96P70 1041 aaKnown RBP21.22■□□□□ 0.99
CNOT2-209ENST00000548159 CARD14Q9BXL6 1004 aa21.21■□□□□ 0.99
CNOT2-209ENST00000548159 ZNF521Q96K83 1311 aa21.2■□□□□ 0.99
CNOT2-209ENST00000548159 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
CNOT2-209ENST00000548159 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
CNOT2-209ENST00000548159 ERVK-7P63135 1459 aa21.19■□□□□ 0.98
CNOT2-209ENST00000548159 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CNOT2-209ENST00000548159 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
CNOT2-209ENST00000548159 PDE4AP27815 886 aa21.19■□□□□ 0.98
CNOT2-209ENST00000548159 NPM2Q86SE8 214 aaKnown RBP21.19■□□□□ 0.98
CNOT2-209ENST00000548159 PIK3C2GO75747 1445 aa21.18■□□□□ 0.98
CNOT2-209ENST00000548159 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
CNOT2-209ENST00000548159 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
CNOT2-209ENST00000548159 NBR1Q14596 966 aa21.17■□□□□ 0.98
CNOT2-209ENST00000548159 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
CNOT2-209ENST00000548159 KIAA1210Q9ULL0 1709 aa21.16■□□□□ 0.98
CNOT2-209ENST00000548159 KDM5AP29375 1690 aaKnown RBP21.16■□□□□ 0.98
CNOT2-209ENST00000548159 APAF1O14727 1248 aa21.16■□□□□ 0.98
CNOT2-209ENST00000548159 EFCAB6Q5THR3 1501 aa21.16■□□□□ 0.98
CNOT2-209ENST00000548159 NPC1L1Q9UHC9 1359 aa21.15■□□□□ 0.98
CNOT2-209ENST00000548159 PPRC1Q5VV67 1664 aaKnown RBP21.15■□□□□ 0.98
CNOT2-209ENST00000548159 MYOM2P54296 1465 aa21.15■□□□□ 0.98
CNOT2-209ENST00000548159 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
CNOT2-209ENST00000548159 MROH2AA6NES4 1674 aa21.14■□□□□ 0.98
CNOT2-209ENST00000548159 GGT6Q6P531 493 aa21.14■□□□□ 0.98
CNOT2-209ENST00000548159 BACH2Q9BYV9 841 aa21.14■□□□□ 0.98
CNOT2-209ENST00000548159 KIF1BO60333 1816 aa21.14■□□□□ 0.97
CNOT2-209ENST00000548159 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
CNOT2-209ENST00000548159 SLFN5Q08AF3 891 aa21.13■□□□□ 0.97
CNOT2-209ENST00000548159 NOS1P29475 1434 aa21.13■□□□□ 0.97
CNOT2-209ENST00000548159 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
CNOT2-209ENST00000548159 NEURL4Q96JN8 1562 aa21.12■□□□□ 0.97
CNOT2-209ENST00000548159 TMEM132EQ6IEE7 984 aa21.11■□□□□ 0.97
CNOT2-209ENST00000548159 DMRT2Q9Y5R5 561 aa21.11■□□□□ 0.97
CNOT2-209ENST00000548159 MS4A1P11836 297 aa21.09■□□□□ 0.97
CNOT2-209ENST00000548159 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
CNOT2-209ENST00000548159 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
CNOT2-209ENST00000548159 TRMT2AQ8IZ69 625 aaKnown RBP21.08■□□□□ 0.97
CNOT2-209ENST00000548159 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.96
CNOT2-209ENST00000548159 NRXN1Q9ULB1 1477 aa21.08■□□□□ 0.96
CNOT2-209ENST00000548159 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.96
CNOT2-209ENST00000548159 NPATQ14207 1427 aa21.08■□□□□ 0.96
CNOT2-209ENST00000548159 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
CNOT2-209ENST00000548159 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
CNOT2-209ENST00000548159 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
CNOT2-209ENST00000548159 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
CNOT2-209ENST00000548159 KDM2BQ8NHM5 1336 aa21.06■□□□□ 0.96
CNOT2-209ENST00000548159 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
CNOT2-209ENST00000548159 BCAR3O75815 825 aa21.05■□□□□ 0.96
CNOT2-209ENST00000548159 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
CNOT2-209ENST00000548159 C14orf93Q9H972 538 aaKnown RBP21.04■□□□□ 0.96
CNOT2-209ENST00000548159 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
CNOT2-209ENST00000548159 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
CNOT2-209ENST00000548159 SBNO2Q9Y2G9 1366 aa21.02■□□□□ 0.96
CNOT2-209ENST00000548159 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.96
CNOT2-209ENST00000548159 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
CNOT2-209ENST00000548159 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
CNOT2-209ENST00000548159 RAPGEF3O95398 923 aa21.01■□□□□ 0.95
CNOT2-209ENST00000548159 DEKP35659 375 aaKnown RBP21.01■□□□□ 0.95
CNOT2-209ENST00000548159 POGZQ7Z3K3 1410 aa21■□□□□ 0.95
CNOT2-209ENST00000548159 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
CNOT2-209ENST00000548159 MORC1Q86VD1 984 aa21■□□□□ 0.95
CNOT2-209ENST00000548159 GOLGA6L2Q8N9W4 650 aaPredicted RBP21■□□□□ 0.95
CNOT2-209ENST00000548159 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
CNOT2-209ENST00000548159 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
CNOT2-209ENST00000548159 E9PSI1 815 aa20.98■□□□□ 0.95
CNOT2-209ENST00000548159 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
CNOT2-209ENST00000548159 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
CNOT2-209ENST00000548159 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
CNOT2-209ENST00000548159 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
CNOT2-209ENST00000548159 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
CNOT2-209ENST00000548159 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
CNOT2-209ENST00000548159 MLH3Q9UHC1 1453 aa20.96■□□□□ 0.95
CNOT2-209ENST00000548159 PPLO60437 1756 aa20.96■□□□□ 0.95
CNOT2-209ENST00000548159 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
CNOT2-209ENST00000548159 QRICH2Q9H0J4 1663 aa20.93■□□□□ 0.94
CNOT2-209ENST00000548159 LAS1LQ9Y4W2 734 aaKnown RBP20.93■□□□□ 0.94
CNOT2-209ENST00000548159 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms