RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 PRR14Q9BWN1 585 aa13.63□□□□□ -0.23
CHPT1-203ENST00000546873 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
CHPT1-203ENST00000546873 PXYLP1Q8TE99 480 aa13.59□□□□□ -0.23
CHPT1-203ENST00000546873 GPR37O15354 613 aa13.58□□□□□ -0.24
CHPT1-203ENST00000546873 A0A0G2JS52 829 aa13.57□□□□□ -0.24
CHPT1-203ENST00000546873 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
CHPT1-203ENST00000546873 METTL3Q86U44 580 aaKnown RBP13.57□□□□□ -0.24
CHPT1-203ENST00000546873 FECHP22830 423 aa13.56□□□□□ -0.24
CHPT1-203ENST00000546873 APLP1P51693 650 aa13.56□□□□□ -0.24
CHPT1-203ENST00000546873 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
CHPT1-203ENST00000546873 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
CHPT1-203ENST00000546873 MTRQ99707 1265 aa13.54□□□□□ -0.24
CHPT1-203ENST00000546873 NACADO15069 1562 aa13.54□□□□□ -0.24
CHPT1-203ENST00000546873 RGS20O76081 388 aa13.52□□□□□ -0.25
CHPT1-203ENST00000546873 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.25
CHPT1-203ENST00000546873 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
CHPT1-203ENST00000546873 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
CHPT1-203ENST00000546873 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
CHPT1-203ENST00000546873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHPT1-203ENST00000546873 CFHP08603 1231 aa13.47□□□□□ -0.25
CHPT1-203ENST00000546873 MAP2K5Q13163 448 aa13.47□□□□□ -0.25
CHPT1-203ENST00000546873 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
CHPT1-203ENST00000546873 COPS2P61201 443 aa13.46□□□□□ -0.25
CHPT1-203ENST00000546873 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
CHPT1-203ENST00000546873 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
CHPT1-203ENST00000546873 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CHPT1-203ENST00000546873 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
CHPT1-203ENST00000546873 ACTN4O43707 911 aaKnown RBP13.43□□□□□ -0.26
CHPT1-203ENST00000546873 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
CHPT1-203ENST00000546873 SLC10A3P09131 477 aa13.42□□□□□ -0.26
CHPT1-203ENST00000546873 ZNF516Q92618 1163 aa13.42□□□□□ -0.26
CHPT1-203ENST00000546873 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
CHPT1-203ENST00000546873 IRF6O14896 467 aa13.41□□□□□ -0.26
CHPT1-203ENST00000546873 GGCXP38435 758 aa13.4□□□□□ -0.26
CHPT1-203ENST00000546873 ZPR1O75312 459 aa13.39□□□□□ -0.27
CHPT1-203ENST00000546873 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
CHPT1-203ENST00000546873 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
CHPT1-203ENST00000546873 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
CHPT1-203ENST00000546873 NR1I2O75469 434 aa13.37□□□□□ -0.27
CHPT1-203ENST00000546873 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
CHPT1-203ENST00000546873 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
CHPT1-203ENST00000546873 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
CHPT1-203ENST00000546873 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
CHPT1-203ENST00000546873 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
CHPT1-203ENST00000546873 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
CHPT1-203ENST00000546873 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
CHPT1-203ENST00000546873 GCGRP47871 477 aa13.29□□□□□ -0.28
CHPT1-203ENST00000546873 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
CHPT1-203ENST00000546873 CLCN1P35523 988 aa13.28□□□□□ -0.28
CHPT1-203ENST00000546873 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
CHPT1-203ENST00000546873 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
CHPT1-203ENST00000546873 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
CHPT1-203ENST00000546873 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
CHPT1-203ENST00000546873 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
CHPT1-203ENST00000546873 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CHPT1-203ENST00000546873 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
CHPT1-203ENST00000546873 IRX2Q9BZI1 471 aaPredicted RBP13.26□□□□□ -0.29
CHPT1-203ENST00000546873 TLL1O43897 1013 aa13.25□□□□□ -0.29
CHPT1-203ENST00000546873 ZMYND10O75800 440 aa13.25□□□□□ -0.29
CHPT1-203ENST00000546873 FUT2Q10981 343 aa13.25□□□□□ -0.29
CHPT1-203ENST00000546873 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
CHPT1-203ENST00000546873 ADH1BP00325 375 aa13.24□□□□□ -0.29
CHPT1-203ENST00000546873 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
CHPT1-203ENST00000546873 CD46P15529 392 aa13.21□□□□□ -0.29
CHPT1-203ENST00000546873 MORN1Q5T089 497 aa13.21□□□□□ -0.29
CHPT1-203ENST00000546873 SPSB2Q99619 263 aa13.2□□□□□ -0.3
CHPT1-203ENST00000546873 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
CHPT1-203ENST00000546873 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
CHPT1-203ENST00000546873 KDM4AO75164 1064 aa13.18□□□□□ -0.3
CHPT1-203ENST00000546873 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
CHPT1-203ENST00000546873 S1PR4O95977 384 aa13.18□□□□□ -0.3
CHPT1-203ENST00000546873 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
CHPT1-203ENST00000546873 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
CHPT1-203ENST00000546873 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
CHPT1-203ENST00000546873 USP46P62068 366 aa13.17□□□□□ -0.3
CHPT1-203ENST00000546873 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
CHPT1-203ENST00000546873 SLC27A5Q9Y2P5 690 aa13.16□□□□□ -0.3
CHPT1-203ENST00000546873 Q3C1V9 767 aa13.15□□□□□ -0.3
CHPT1-203ENST00000546873 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
CHPT1-203ENST00000546873 BCANQ96GW7 911 aa13.15□□□□□ -0.3
CHPT1-203ENST00000546873 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CHPT1-203ENST00000546873 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
CHPT1-203ENST00000546873 AK7Q96M32 723 aa13.12□□□□□ -0.31
CHPT1-203ENST00000546873 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
CHPT1-203ENST00000546873 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
CHPT1-203ENST00000546873 AMHR2Q16671 573 aa13.11□□□□□ -0.31
CHPT1-203ENST00000546873 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
CHPT1-203ENST00000546873 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
CHPT1-203ENST00000546873 SLC19A1P41440 591 aa13.1□□□□□ -0.31
CHPT1-203ENST00000546873 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
CHPT1-203ENST00000546873 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
CHPT1-203ENST00000546873 BRICD5Q6PL45 260 aa13.09□□□□□ -0.31
CHPT1-203ENST00000546873 THAP11Q96EK4 314 aa13.09□□□□□ -0.31
CHPT1-203ENST00000546873 GFRA3O60609 400 aa13.06□□□□□ -0.32
CHPT1-203ENST00000546873 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
CHPT1-203ENST00000546873 TRIM66O15016 1216 aa13.05□□□□□ -0.32
CHPT1-203ENST00000546873 HOXA2O43364 376 aa13.05□□□□□ -0.32
CHPT1-203ENST00000546873 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
CHPT1-203ENST00000546873 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
CHPT1-203ENST00000546873 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms