RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 HSCBQ8IWL3 235 aa11.37□□□□□ -0.59
MTHFD1-202ENST00000545908 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
MTHFD1-202ENST00000545908 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 ADGRL1O94910 1474 aa11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 ERBINQ96RT1 1412 aa11.36□□□□□ -0.59
MTHFD1-202ENST00000545908 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
MTHFD1-202ENST00000545908 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
MTHFD1-202ENST00000545908 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
MTHFD1-202ENST00000545908 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
MTHFD1-202ENST00000545908 CAMSAP2Q08AD1 1489 aa11.35□□□□□ -0.59
MTHFD1-202ENST00000545908 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
MTHFD1-202ENST00000545908 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
MTHFD1-202ENST00000545908 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
MTHFD1-202ENST00000545908 CCDC141Q6ZP82 1450 aa11.34□□□□□ -0.59
MTHFD1-202ENST00000545908 NLRP6P59044 892 aa11.33□□□□□ -0.6
MTHFD1-202ENST00000545908 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
MTHFD1-202ENST00000545908 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
MTHFD1-202ENST00000545908 STRN4Q9NRL3 753 aa11.32□□□□□ -0.6
MTHFD1-202ENST00000545908 RAPGEF6Q8TEU7 1601 aa11.32□□□□□ -0.6
MTHFD1-202ENST00000545908 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
MTHFD1-202ENST00000545908 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-202ENST00000545908 CLUAP1Q96AJ1 413 aa11.32□□□□□ -0.6
MTHFD1-202ENST00000545908 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 GOLGA6L4A6NEF3 574 aa11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
MTHFD1-202ENST00000545908 SLC52A1Q9NWF4 448 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 HMOX1P09601 288 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 GGNBP2Q9H3C7 697 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 RIPK4P57078 832 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
MTHFD1-202ENST00000545908 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 AKNAQ7Z591 1439 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 PDE3BQ13370 1112 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
MTHFD1-202ENST00000545908 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 TSPYL4Q9UJ04 414 aa11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 FANCAO15360 1455 aa11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 E9PSI1 815 aa11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
MTHFD1-202ENST00000545908 DENND4BO75064 1496 aaPredicted RBP11.27□□□□□ -0.6
MTHFD1-202ENST00000545908 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.61
MTHFD1-202ENST00000545908 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
MTHFD1-202ENST00000545908 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
MTHFD1-202ENST00000545908 TEX14Q8IWB6 1497 aa11.27□□□□□ -0.61
MTHFD1-202ENST00000545908 RUNDC1Q96C34 613 aa11.26□□□□□ -0.61
MTHFD1-202ENST00000545908 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-202ENST00000545908 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
MTHFD1-202ENST00000545908 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
MTHFD1-202ENST00000545908 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
MTHFD1-202ENST00000545908 AMOTL1Q8IY63 956 aa11.25□□□□□ -0.61
MTHFD1-202ENST00000545908 TOM1L2Q6ZVM7 507 aa11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 TATP17735 454 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
MTHFD1-202ENST00000545908 KIF6Q6ZMV9 814 aa11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 APAF1O14727 1248 aa11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
MTHFD1-202ENST00000545908 AIMP1Q12904 312 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
MTHFD1-202ENST00000545908 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-202ENST00000545908 THOC2Q8NI27 1593 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-202ENST00000545908 ASXL2Q76L83 1435 aa11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 KIF7Q2M1P5 1343 aa11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 CNTLNQ9NXG0 1405 aa11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 GNAI1P63096 354 aa11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-202ENST00000545908 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms