RNA–Protein interactions for RNA: ENST00000544724.5

PSMD9-211, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 3,051 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-211ENST00000544724 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
PSMD9-211ENST00000544724 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
PSMD9-211ENST00000544724 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
PSMD9-211ENST00000544724 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
PSMD9-211ENST00000544724 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
PSMD9-211ENST00000544724 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
PSMD9-211ENST00000544724 BECN1Q14457 450 aa12.08□□□□□ -0.48
PSMD9-211ENST00000544724 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
PSMD9-211ENST00000544724 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
PSMD9-211ENST00000544724 ATP10BO94823 1461 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 MAGI1Q96QZ7 1491 aaPredicted RBP12.07□□□□□ -0.48
PSMD9-211ENST00000544724 WDR7Q9Y4E6 1490 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 E9PSI1 815 aa12.07□□□□□ -0.48
PSMD9-211ENST00000544724 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
PSMD9-211ENST00000544724 ANTXR1Q9H6X2 564 aa12.06□□□□□ -0.48
PSMD9-211ENST00000544724 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
PSMD9-211ENST00000544724 TRMT2AQ8IZ69 625 aaKnown RBP12.05□□□□□ -0.48
PSMD9-211ENST00000544724 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
PSMD9-211ENST00000544724 CDC42BPAQ5VT25 1732 aa12.05□□□□□ -0.48
PSMD9-211ENST00000544724 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
PSMD9-211ENST00000544724 UPF2Q9HAU5 1272 aaKnown RBP12.05□□□□□ -0.48
PSMD9-211ENST00000544724 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
PSMD9-211ENST00000544724 PTPRGP23470 1445 aa12.04□□□□□ -0.48
PSMD9-211ENST00000544724 CROCC2H7BZ55 1655 aa12.04□□□□□ -0.48
PSMD9-211ENST00000544724 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
PSMD9-211ENST00000544724 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
PSMD9-211ENST00000544724 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
PSMD9-211ENST00000544724 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
PSMD9-211ENST00000544724 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
PSMD9-211ENST00000544724 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
PSMD9-211ENST00000544724 ABCC10Q5T3U5 1492 aa12.03□□□□□ -0.48
PSMD9-211ENST00000544724 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
PSMD9-211ENST00000544724 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.48
PSMD9-211ENST00000544724 SLC12A5Q9H2X9 1139 aa12.02□□□□□ -0.49
PSMD9-211ENST00000544724 ADCY10Q96PN6 1610 aa12.02□□□□□ -0.49
PSMD9-211ENST00000544724 CARMIL2Q6F5E8 1435 aa12.01□□□□□ -0.49
PSMD9-211ENST00000544724 MCM4P33991 863 aa12.01□□□□□ -0.49
PSMD9-211ENST00000544724 SAFB2Q14151 953 aaKnown RBP eCLIP12.01□□□□□ -0.49
PSMD9-211ENST00000544724 AFAP1Q8N556 730 aa12.01□□□□□ -0.49
PSMD9-211ENST00000544724 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
PSMD9-211ENST00000544724 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
PSMD9-211ENST00000544724 TRAK2O60296 914 aa12□□□□□ -0.49
PSMD9-211ENST00000544724 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
PSMD9-211ENST00000544724 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
PSMD9-211ENST00000544724 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
PSMD9-211ENST00000544724 SYCP2Q9BX26 1530 aa12□□□□□ -0.49
PSMD9-211ENST00000544724 MORC1Q86VD1 984 aa12□□□□□ -0.49
PSMD9-211ENST00000544724 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
PSMD9-211ENST00000544724 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
PSMD9-211ENST00000544724 PDE3AQ14432 1141 aa11.99□□□□□ -0.49
PSMD9-211ENST00000544724 C22orf23Q9BZE7 217 aa11.99□□□□□ -0.49
PSMD9-211ENST00000544724 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
PSMD9-211ENST00000544724 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
PSMD9-211ENST00000544724 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
PSMD9-211ENST00000544724 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
PSMD9-211ENST00000544724 L1TD1Q5T7N2 865 aaKnown RBP11.98□□□□□ -0.49
PSMD9-211ENST00000544724 ERBB4Q15303 1308 aa11.98□□□□□ -0.49
PSMD9-211ENST00000544724 ADGRF5Q8IZF2 1346 aa11.98□□□□□ -0.49
PSMD9-211ENST00000544724 MTHFSP49914 203 aa11.98□□□□□ -0.49
PSMD9-211ENST00000544724 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
PSMD9-211ENST00000544724 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
PSMD9-211ENST00000544724 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.49
PSMD9-211ENST00000544724 INSRP06213 1382 aa11.97□□□□□ -0.49
PSMD9-211ENST00000544724 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
PSMD9-211ENST00000544724 ARHGAP5Q13017 1502 aa11.96□□□□□ -0.49
PSMD9-211ENST00000544724 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.49
PSMD9-211ENST00000544724 ARID3AQ99856 593 aa11.96□□□□□ -0.49
PSMD9-211ENST00000544724 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.49
PSMD9-211ENST00000544724 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.5
PSMD9-211ENST00000544724 CDCA8Q53HL2 280 aa11.96□□□□□ -0.5
PSMD9-211ENST00000544724 GAS2L3Q86XJ1 694 aa11.96□□□□□ -0.5
PSMD9-211ENST00000544724 LNPKQ9C0E8 428 aa11.96□□□□□ -0.5
PSMD9-211ENST00000544724 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
PSMD9-211ENST00000544724 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
PSMD9-211ENST00000544724 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
PSMD9-211ENST00000544724 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
PSMD9-211ENST00000544724 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
PSMD9-211ENST00000544724 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
PSMD9-211ENST00000544724 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
PSMD9-211ENST00000544724 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
PSMD9-211ENST00000544724 CD2BP2O95400 341 aaKnown RBP11.93□□□□□ -0.5
PSMD9-211ENST00000544724 KIF3BO15066 747 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 FBLN1P23142 703 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
PSMD9-211ENST00000544724 TRIM27P14373 513 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
PSMD9-211ENST00000544724 MVPQ14764 893 aaKnown RBP11.92□□□□□ -0.5
PSMD9-211ENST00000544724 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
PSMD9-211ENST00000544724 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 CHMP5Q9NZZ3 219 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 HSCBQ8IWL3 235 aa11.92□□□□□ -0.5
PSMD9-211ENST00000544724 ABCA8O94911 1581 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms