RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPSF7-223ENST00000544669 ADGRL1O94910 1474 aa17.24■□□□□ 0.35
CPSF7-223ENST00000544669 ANP32AP39687 249 aaKnown RBP17.24■□□□□ 0.35
CPSF7-223ENST00000544669 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
CPSF7-223ENST00000544669 MS4A1P11836 297 aa17.23■□□□□ 0.35
CPSF7-223ENST00000544669 KIF3BO15066 747 aa17.21■□□□□ 0.35
CPSF7-223ENST00000544669 MSH5O43196 834 aa17.21■□□□□ 0.35
CPSF7-223ENST00000544669 ASXL1Q8IXJ9 1541 aa17.21■□□□□ 0.35
CPSF7-223ENST00000544669 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.35
CPSF7-223ENST00000544669 NPM1P06748 294 aaKnown RBP eCLIP17.21■□□□□ 0.35
CPSF7-223ENST00000544669 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
CPSF7-223ENST00000544669 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
CPSF7-223ENST00000544669 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
CPSF7-223ENST00000544669 CLTCL1P53675 1640 aa17.2■□□□□ 0.34
CPSF7-223ENST00000544669 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
CPSF7-223ENST00000544669 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
CPSF7-223ENST00000544669 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
CPSF7-223ENST00000544669 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
CPSF7-223ENST00000544669 NOP58Q9Y2X3 529 aaKnown RBP17.15■□□□□ 0.34
CPSF7-223ENST00000544669 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
CPSF7-223ENST00000544669 MAP3K4Q9Y6R4 1608 aa17.15■□□□□ 0.34
CPSF7-223ENST00000544669 ASXL2Q76L83 1435 aa17.15■□□□□ 0.34
CPSF7-223ENST00000544669 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.34
CPSF7-223ENST00000544669 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
CPSF7-223ENST00000544669 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
CPSF7-223ENST00000544669 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
CPSF7-223ENST00000544669 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
CPSF7-223ENST00000544669 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
CPSF7-223ENST00000544669 NRXN1Q9ULB1 1477 aa17.13■□□□□ 0.33
CPSF7-223ENST00000544669 SETBP1Q9Y6X0 1596 aa17.12■□□□□ 0.33
CPSF7-223ENST00000544669 KIF1BO60333 1816 aa17.11■□□□□ 0.33
CPSF7-223ENST00000544669 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-223ENST00000544669 MLH3Q9UHC1 1453 aa17.11■□□□□ 0.33
CPSF7-223ENST00000544669 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
CPSF7-223ENST00000544669 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-223ENST00000544669 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
CPSF7-223ENST00000544669 ZNF521Q96K83 1311 aa17.08■□□□□ 0.33
CPSF7-223ENST00000544669 MYO3AQ8NEV4 1616 aa17.08■□□□□ 0.32
CPSF7-223ENST00000544669 CFAP70Q5T0N1 1121 aa17.06■□□□□ 0.32
CPSF7-223ENST00000544669 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-223ENST00000544669 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 E9PSI1 815 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
CPSF7-223ENST00000544669 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-223ENST00000544669 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-223ENST00000544669 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
CPSF7-223ENST00000544669 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
CPSF7-223ENST00000544669 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
CPSF7-223ENST00000544669 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
CPSF7-223ENST00000544669 PDE4AP27815 886 aa17.03■□□□□ 0.32
CPSF7-223ENST00000544669 AAMPQ13685 434 aa17.03■□□□□ 0.32
CPSF7-223ENST00000544669 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
CPSF7-223ENST00000544669 MYOM1P52179 1685 aa17.02■□□□□ 0.32
CPSF7-223ENST00000544669 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.31
CPSF7-223ENST00000544669 BACH2Q9BYV9 841 aa17.02■□□□□ 0.31
CPSF7-223ENST00000544669 NEO1Q92859 1461 aa17.02■□□□□ 0.31
CPSF7-223ENST00000544669 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
CPSF7-223ENST00000544669 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-223ENST00000544669 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
CPSF7-223ENST00000544669 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
CPSF7-223ENST00000544669 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
CPSF7-223ENST00000544669 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
CPSF7-223ENST00000544669 HECW2Q9P2P5 1572 aa16.99■□□□□ 0.31
CPSF7-223ENST00000544669 NSD2O96028 1365 aa16.99■□□□□ 0.31
CPSF7-223ENST00000544669 NOS1P29475 1434 aa16.98■□□□□ 0.31
CPSF7-223ENST00000544669 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
CPSF7-223ENST00000544669 NPATQ14207 1427 aa16.97■□□□□ 0.31
CPSF7-223ENST00000544669 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.31
CPSF7-223ENST00000544669 PDE3AQ14432 1141 aa16.96■□□□□ 0.3
CPSF7-223ENST00000544669 MORC1Q86VD1 984 aa16.96■□□□□ 0.3
CPSF7-223ENST00000544669 PLIN1O60240 522 aa16.95■□□□□ 0.3
CPSF7-223ENST00000544669 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
CPSF7-223ENST00000544669 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-223ENST00000544669 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
CPSF7-223ENST00000544669 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
CPSF7-223ENST00000544669 APAF1O14727 1248 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 CARD14Q9BXL6 1004 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 SLC52A1Q9NWF4 448 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
CPSF7-223ENST00000544669 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
CPSF7-223ENST00000544669 GGT6Q6P531 493 aa16.93■□□□□ 0.3
CPSF7-223ENST00000544669 ABCC3O15438 1527 aa16.93■□□□□ 0.3
CPSF7-223ENST00000544669 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
CPSF7-223ENST00000544669 RUNDC1Q96C34 613 aa16.92■□□□□ 0.3
CPSF7-223ENST00000544669 PPLO60437 1756 aa16.92■□□□□ 0.3
CPSF7-223ENST00000544669 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-223ENST00000544669 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
CPSF7-223ENST00000544669 ADGRB1O14514 1584 aa16.91■□□□□ 0.3
CPSF7-223ENST00000544669 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms