RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 ANKRD62A6NC57 917 aa9.9□□□□□ -0.82
ABCA13-207ENST00000544596 NEFHP12036 1026 aa9.9□□□□□ -0.82
ABCA13-207ENST00000544596 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
ABCA13-207ENST00000544596 ROCK2O75116 1388 aaKnown RBP9.9□□□□□ -0.82
ABCA13-207ENST00000544596 TEX35Q5T0J7 233 aa9.9□□□□□ -0.83
ABCA13-207ENST00000544596 CCDC173Q0VFZ6 552 aa9.9□□□□□ -0.83
ABCA13-207ENST00000544596 PKD2Q13563 968 aa9.9□□□□□ -0.83
ABCA13-207ENST00000544596 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
ABCA13-207ENST00000544596 CENPJQ9HC77 1338 aaPredicted RBP9.89□□□□□ -0.83
ABCA13-207ENST00000544596 IFIT2P09913 472 aaKnown RBP9.89□□□□□ -0.83
ABCA13-207ENST00000544596 RDXP35241 583 aaKnown RBP9.89□□□□□ -0.83
ABCA13-207ENST00000544596 BCL2L13Q9BXK5 485 aa9.89□□□□□ -0.83
ABCA13-207ENST00000544596 PLIN1O60240 522 aa9.89□□□□□ -0.83
ABCA13-207ENST00000544596 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
ABCA13-207ENST00000544596 CCDC191Q8NCU4 936 aa9.88□□□□□ -0.83
ABCA13-207ENST00000544596 ZKSCAN1P17029 563 aaPredicted RBP9.88□□□□□ -0.83
ABCA13-207ENST00000544596 CAGE1Q8TC20 777 aa9.88□□□□□ -0.83
ABCA13-207ENST00000544596 FAM177BA6PVY3 158 aa9.88□□□□□ -0.83
ABCA13-207ENST00000544596 SAFBQ15424 915 aaKnown RBP eCLIP9.87□□□□□ -0.83
ABCA13-207ENST00000544596 PDILTQ8N807 584 aa9.87□□□□□ -0.83
ABCA13-207ENST00000544596 DHX37Q8IY37 1157 aaKnown RBP9.87□□□□□ -0.83
ABCA13-207ENST00000544596 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
ABCA13-207ENST00000544596 RUFY2Q8WXA3 655 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 KIF3BO15066 747 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 EIF4G1Q04637 1599 aaKnown RBP9.86□□□□□ -0.83
ABCA13-207ENST00000544596 NEUROD6Q96NK8 337 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 WASHC4Q2M389 1173 aa9.86□□□□□ -0.83
ABCA13-207ENST00000544596 MNS1Q8NEH6 495 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 H0YHG0 523 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 SYCP1Q15431 976 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 DCTN1Q14203 1278 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 ATP2B2Q01814 1243 aa9.85□□□□□ -0.83
ABCA13-207ENST00000544596 G3BP1Q13283 466 aaKnown RBP eCLIP9.84□□□□□ -0.83
ABCA13-207ENST00000544596 ZRSR2Q15696 482 aaKnown RBP9.84□□□□□ -0.83
ABCA13-207ENST00000544596 HSP90B2PQ58FF3 399 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 SASS6Q6UVJ0 657 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 WASHC2CQ9Y4E1 1318 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 PDCL3Q9H2J4 239 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 COG3Q96JB2 828 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 BRMS1Q9HCU9 246 aa9.84□□□□□ -0.83
ABCA13-207ENST00000544596 ATP2B1P20020 1258 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 RALYLQ86SE5 291 aaKnown RBP9.83□□□□□ -0.84
ABCA13-207ENST00000544596 NACADO15069 1562 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 ACBD3Q9H3P7 528 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 KRT18P05783 430 aaKnown RBP9.83□□□□□ -0.84
ABCA13-207ENST00000544596 PSME1Q06323 249 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 IFT57Q9NWB7 429 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 AIMP1Q12904 312 aaKnown RBP9.83□□□□□ -0.84
ABCA13-207ENST00000544596 SF3B2Q13435 895 aaKnown RBP9.83□□□□□ -0.84
ABCA13-207ENST00000544596 EIF3AQ14152 1382 aaKnown RBP9.83□□□□□ -0.84
ABCA13-207ENST00000544596 CDK5RAP3Q96JB5 506 aa9.83□□□□□ -0.84
ABCA13-207ENST00000544596 RNF20Q5VTR2 975 aa9.82□□□□□ -0.84
ABCA13-207ENST00000544596 FAM13BQ9NYF5 915 aa9.82□□□□□ -0.84
ABCA13-207ENST00000544596 NEBLO76041 1014 aa9.82□□□□□ -0.84
ABCA13-207ENST00000544596 DDX58O95786 925 aaKnown RBP9.82□□□□□ -0.84
ABCA13-207ENST00000544596 SEPT7Q16181 437 aaKnown RBP9.82□□□□□ -0.84
ABCA13-207ENST00000544596 RALBP1Q15311 655 aa9.82□□□□□ -0.84
ABCA13-207ENST00000544596 MYO6Q9UM54 1294 aa9.82□□□□□ -0.84
ABCA13-207ENST00000544596 BRPF1P55201 1214 aaPredicted RBP9.82□□□□□ -0.84
ABCA13-207ENST00000544596 OLFM4Q6UX06 510 aa9.81□□□□□ -0.84
ABCA13-207ENST00000544596 CCDC73Q6ZRK6 1079 aa9.81□□□□□ -0.84
ABCA13-207ENST00000544596 NOM1Q5C9Z4 860 aaKnown RBP9.81□□□□□ -0.84
ABCA13-207ENST00000544596 ZHX3Q9H4I2 956 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 ARGLU1Q9NWB6 273 aaPredicted RBP9.8□□□□□ -0.84
ABCA13-207ENST00000544596 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
ABCA13-207ENST00000544596 TSPYL1Q9H0U9 437 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 XBP1P17861 261 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
ABCA13-207ENST00000544596 HSP90AB3PQ58FF7 597 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
ABCA13-207ENST00000544596 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
ABCA13-207ENST00000544596 STK11IPQ8N1F8 1099 aa9.79□□□□□ -0.84
ABCA13-207ENST00000544596 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
ABCA13-207ENST00000544596 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
ABCA13-207ENST00000544596 MPHOSPH10O00566 681 aaKnown RBP9.78□□□□□ -0.84
ABCA13-207ENST00000544596 MATR3P43243 847 aaKnown RBP eCLIP9.78□□□□□ -0.84
ABCA13-207ENST00000544596 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.84
ABCA13-207ENST00000544596 SKOR2Q2VWA4 1001 aaPredicted RBP9.78□□□□□ -0.84
ABCA13-207ENST00000544596 NUP155O75694 1391 aa9.78□□□□□ -0.84
ABCA13-207ENST00000544596 REC8O95072 547 aa9.78□□□□□ -0.84
ABCA13-207ENST00000544596 DCAF1Q9Y4B6 1507 aa9.78□□□□□ -0.84
ABCA13-207ENST00000544596 ANKRD18AQ8IVF6 992 aa9.78□□□□□ -0.84
ABCA13-207ENST00000544596 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.84
ABCA13-207ENST00000544596 MYCNP04198 464 aaPredicted RBP9.77□□□□□ -0.85
ABCA13-207ENST00000544596 AXDND1Q5T1B0 1012 aaPredicted RBP9.77□□□□□ -0.85
ABCA13-207ENST00000544596 SDF4Q9BRK5 362 aa9.77□□□□□ -0.85
ABCA13-207ENST00000544596 MAGEC2Q9UBF1 373 aaPredicted RBP9.77□□□□□ -0.85
ABCA13-207ENST00000544596 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
ABCA13-207ENST00000544596 TAX1BP1Q86VP1 789 aa9.77□□□□□ -0.85
ABCA13-207ENST00000544596 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
ABCA13-207ENST00000544596 GOLGA3Q08378 1498 aa9.77□□□□□ -0.85
ABCA13-207ENST00000544596 HMGN5P82970 282 aaKnown RBP9.76□□□□□ -0.85
ABCA13-207ENST00000544596 RAPGEF4Q8WZA2 1011 aa9.76□□□□□ -0.85
ABCA13-207ENST00000544596 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
ABCA13-207ENST00000544596 PAXIP1Q6ZW49 1069 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms