RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
CHD4-211ENST00000544484 DZIP1LQ8IYY4 767 aaKnown RBP15.82■□□□□ 0.12
CHD4-211ENST00000544484 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
CHD4-211ENST00000544484 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
CHD4-211ENST00000544484 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
CHD4-211ENST00000544484 DDX19BQ9UMR2 479 aa15.8■□□□□ 0.12
CHD4-211ENST00000544484 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
CHD4-211ENST00000544484 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
CHD4-211ENST00000544484 CFAP70Q5T0N1 1121 aa15.79■□□□□ 0.12
CHD4-211ENST00000544484 DIAPH3Q9NSV4 1193 aa15.79■□□□□ 0.12
CHD4-211ENST00000544484 CUX1P39880 1505 aa15.78■□□□□ 0.12
CHD4-211ENST00000544484 TPM4P67936 248 aa15.78■□□□□ 0.12
CHD4-211ENST00000544484 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
CHD4-211ENST00000544484 MSH5O43196 834 aa15.77■□□□□ 0.12
CHD4-211ENST00000544484 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.11
CHD4-211ENST00000544484 H3BQV1 296 aa15.77■□□□□ 0.11
CHD4-211ENST00000544484 IFFO2Q5TF58 517 aa15.77■□□□□ 0.11
CHD4-211ENST00000544484 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.77■□□□□ 0.11
CHD4-211ENST00000544484 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.11
CHD4-211ENST00000544484 API5Q9BZZ5 524 aaKnown RBP15.77■□□□□ 0.11
CHD4-211ENST00000544484 CCDC34Q96HJ3 373 aa15.77■□□□□ 0.11
CHD4-211ENST00000544484 ADAMTS8Q9UP79 889 aa15.76■□□□□ 0.11
CHD4-211ENST00000544484 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
CHD4-211ENST00000544484 PANK1Q8TE04 598 aa15.76■□□□□ 0.11
CHD4-211ENST00000544484 DDX49Q9Y6V7 483 aaKnown RBP15.75■□□□□ 0.11
CHD4-211ENST00000544484 MTHFSP49914 203 aa15.75■□□□□ 0.11
CHD4-211ENST00000544484 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
CHD4-211ENST00000544484 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
CHD4-211ENST00000544484 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
CHD4-211ENST00000544484 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
CHD4-211ENST00000544484 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
CHD4-211ENST00000544484 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
CHD4-211ENST00000544484 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
CHD4-211ENST00000544484 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
CHD4-211ENST00000544484 MARCH6O60337 910 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 NLRP6P59044 892 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 GNAI1P63096 354 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
CHD4-211ENST00000544484 MCTP1Q6DN14 999 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 CFTRP13569 1480 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
CHD4-211ENST00000544484 CDCA7LQ96GN5 454 aa15.72■□□□□ 0.11
CHD4-211ENST00000544484 PDE4CQ08493 712 aa15.72■□□□□ 0.11
CHD4-211ENST00000544484 NLRP2Q9NX02 1062 aa15.72■□□□□ 0.11
CHD4-211ENST00000544484 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
CHD4-211ENST00000544484 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
CHD4-211ENST00000544484 ANO2Q9NQ90 1003 aa15.72■□□□□ 0.11
CHD4-211ENST00000544484 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.11
CHD4-211ENST00000544484 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.11
CHD4-211ENST00000544484 APPP05067 770 aa15.71■□□□□ 0.11
CHD4-211ENST00000544484 NESP48681 1621 aa15.71■□□□□ 0.11
CHD4-211ENST00000544484 REC8O95072 547 aa15.7■□□□□ 0.1
CHD4-211ENST00000544484 ATF3P18847 181 aa15.7■□□□□ 0.1
CHD4-211ENST00000544484 G3BP1Q13283 466 aaKnown RBP eCLIP15.7■□□□□ 0.17e-7■■■□□ 15.8
CHD4-211ENST00000544484 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
CHD4-211ENST00000544484 PHF14O94880 888 aa15.7■□□□□ 0.1
CHD4-211ENST00000544484 STAC3Q96MF2 364 aa15.7■□□□□ 0.1
CHD4-211ENST00000544484 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
CHD4-211ENST00000544484 RUFY2Q8WXA3 655 aa15.69■□□□□ 0.1
CHD4-211ENST00000544484 PRG4Q92954 1404 aaPredicted RBP15.69■□□□□ 0.1
CHD4-211ENST00000544484 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
CHD4-211ENST00000544484 RAD21O60216 631 aa15.69■□□□□ 0.1
CHD4-211ENST00000544484 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
CHD4-211ENST00000544484 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
CHD4-211ENST00000544484 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
CHD4-211ENST00000544484 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
CHD4-211ENST00000544484 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
CHD4-211ENST00000544484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.67■□□□□ 0.1
CHD4-211ENST00000544484 RIC3Q7Z5B4 369 aa15.67■□□□□ 0.1
CHD4-211ENST00000544484 SYNE3Q6ZMZ3 975 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 USP35Q9P2H5 1018 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
CHD4-211ENST00000544484 VPS37DQ86XT2 251 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 ATP6V1DQ9Y5K8 247 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 ROCK1Q13464 1354 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
CHD4-211ENST00000544484 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
CHD4-211ENST00000544484 ESCO1Q5FWF5 840 aa15.64■□□□□ 0.09
CHD4-211ENST00000544484 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
CHD4-211ENST00000544484 TPD52L1Q16890 204 aaPredicted RBP15.63■□□□□ 0.09
CHD4-211ENST00000544484 CPLX2Q6PUV4 134 aaKnown RBP15.63■□□□□ 0.09
CHD4-211ENST00000544484 BECN2A8MW95 431 aa15.63■□□□□ 0.09
CHD4-211ENST00000544484 CPLX1O14810 134 aa15.63■□□□□ 0.09
CHD4-211ENST00000544484 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
CHD4-211ENST00000544484 FOSBP53539 338 aa15.63■□□□□ 0.09
CHD4-211ENST00000544484 FBXW7Q969H0 707 aa15.62■□□□□ 0.09
CHD4-211ENST00000544484 GOLGA6L19H0YKK7 550 aa15.62■□□□□ 0.09
CHD4-211ENST00000544484 GSE1Q14687 1217 aa15.62■□□□□ 0.09
CHD4-211ENST00000544484 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
CHD4-211ENST00000544484 UBTFL1P0CB47 393 aaPredicted RBP15.62■□□□□ 0.09
CHD4-211ENST00000544484 EXOSC9Q06265 439 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms