RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 STAG3Q9UJ98 1225 aa30.04■■■□□ 2.4
PGAM5-204ENST00000543955 PTPRMP28827 1452 aa30.01■■■□□ 2.4
PGAM5-204ENST00000543955 KIAA1210Q9ULL0 1709 aa30.01■■■□□ 2.4
PGAM5-204ENST00000543955 NRXN1Q9ULB1 1477 aa30.01■■■□□ 2.39
PGAM5-204ENST00000543955 SETD1BQ9UPS6 1966 aaKnown RBP29.99■■■□□ 2.39
PGAM5-204ENST00000543955 PLPPR3Q6T4P5 718 aa29.98■■■□□ 2.39
PGAM5-204ENST00000543955 ZNF142P52746 1687 aaPredicted RBP29.97■■■□□ 2.39
PGAM5-204ENST00000543955 ZFYVE9O95405 1425 aa29.96■■■□□ 2.39
PGAM5-204ENST00000543955 LAMC1P11047 1609 aa29.96■■■□□ 2.39
PGAM5-204ENST00000543955 CEP170BQ9Y4F5 1589 aaPredicted RBP29.95■■■□□ 2.38
PGAM5-204ENST00000543955 PIK3C2GO75747 1445 aa29.92■■■□□ 2.38
PGAM5-204ENST00000543955 VGFO15240 615 aaPredicted RBP29.92■■■□□ 2.38
PGAM5-204ENST00000543955 ROCK2O75116 1388 aaKnown RBP29.91■■■□□ 2.38
PGAM5-204ENST00000543955 ADGRF5Q8IZF2 1346 aa29.9■■■□□ 2.38
PGAM5-204ENST00000543955 RIMS2Q9UQ26 1411 aa29.9■■■□□ 2.38
PGAM5-204ENST00000543955 GPRASP1Q5JY77 1395 aa29.88■■■□□ 2.37
PGAM5-204ENST00000543955 TMEM2Q9UHN6 1383 aa29.85■■■□□ 2.37
PGAM5-204ENST00000543955 SLIT1O75093 1534 aa29.85■■■□□ 2.37
PGAM5-204ENST00000543955 ZNF316A6NFI3 1004 aaPredicted RBP29.84■■■□□ 2.37
PGAM5-204ENST00000543955 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.84■■■□□ 2.37
PGAM5-204ENST00000543955 SETBP1Q9Y6X0 1596 aa29.84■■■□□ 2.37
PGAM5-204ENST00000543955 HDGFP51858 240 aaKnown RBP29.83■■■□□ 2.37
PGAM5-204ENST00000543955 CARD11Q9BXL7 1154 aa29.82■■■□□ 2.36
PGAM5-204ENST00000543955 EIF4G2P78344 907 aaKnown RBP eCLIP29.82■■■□□ 2.36
PGAM5-204ENST00000543955 ARHGAP23Q9P227 1491 aa29.82■■■□□ 2.36
PGAM5-204ENST00000543955 IQGAP1P46940 1657 aa29.8■■■□□ 2.36
PGAM5-204ENST00000543955 THEMISQ8N1K5 641 aaPredicted RBP29.8■■■□□ 2.36
PGAM5-204ENST00000543955 USP47Q96K76 1375 aa29.79■■■□□ 2.36
PGAM5-204ENST00000543955 NUTM2DQ5VT03 806 aaPredicted RBP29.79■■■□□ 2.36
PGAM5-204ENST00000543955 NBPF1Q3BBV0 1214 aa29.77■■■□□ 2.36
PGAM5-204ENST00000543955 KDM4FA0A1W2PPD8 638 aa29.76■■■□□ 2.35
PGAM5-204ENST00000543955 C14orf93Q9H972 538 aaKnown RBP29.75■■■□□ 2.35
PGAM5-204ENST00000543955 CFAP70Q5T0N1 1121 aa29.75■■■□□ 2.35
PGAM5-204ENST00000543955 ADGRB1O14514 1584 aa29.73■■■□□ 2.35
PGAM5-204ENST00000543955 HSPA5P11021 654 aaKnown RBP29.73■■■□□ 2.35
PGAM5-204ENST00000543955 NRXN3Q9Y4C0 1643 aa29.73■■■□□ 2.35
PGAM5-204ENST00000543955 ALKQ9UM73 1620 aa29.72■■■□□ 2.35
PGAM5-204ENST00000543955 SETD1AO15047 1707 aaKnown RBP29.72■■■□□ 2.35
PGAM5-204ENST00000543955 SCAF11Q99590 1463 aaKnown RBP29.72■■■□□ 2.35
PGAM5-204ENST00000543955 EID1Q9Y6B2 187 aa29.71■■■□□ 2.35
PGAM5-204ENST00000543955 PLEKHG1Q9ULL1 1385 aa29.69■■■□□ 2.34
PGAM5-204ENST00000543955 POLR1AO95602 1720 aaPredicted RBP29.67■■■□□ 2.34
PGAM5-204ENST00000543955 EIF3AQ14152 1382 aaKnown RBP29.67■■■□□ 2.34
PGAM5-204ENST00000543955 ASXL1Q8IXJ9 1541 aa29.66■■■□□ 2.34
PGAM5-204ENST00000543955 TXNDC2Q86VQ3 553 aa29.65■■■□□ 2.34
PGAM5-204ENST00000543955 HIRIP3Q9BW71 556 aaPredicted RBP29.64■■■□□ 2.34
PGAM5-204ENST00000543955 LTKP29376 864 aa29.63■■■□□ 2.33
PGAM5-204ENST00000543955 DIP2AQ14689 1571 aa29.62■■■□□ 2.33
PGAM5-204ENST00000543955 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
PGAM5-204ENST00000543955 ST20-MTHFSA0A0A6YYL1 179 aa29.57■■■□□ 2.32
PGAM5-204ENST00000543955 ADAMTS13Q76LX8 1427 aa29.57■■■□□ 2.32
PGAM5-204ENST00000543955 ANKLE2Q86XL3 938 aa29.57■■■□□ 2.32
PGAM5-204ENST00000543955 BCANQ96GW7 911 aa29.56■■■□□ 2.32
PGAM5-204ENST00000543955 TMEM132EQ6IEE7 984 aa29.55■■■□□ 2.32
PGAM5-204ENST00000543955 SENP3Q9H4L4 574 aaPredicted RBP29.55■■■□□ 2.32
PGAM5-204ENST00000543955 KNDC1Q76NI1 1749 aa29.55■■■□□ 2.32
PGAM5-204ENST00000543955 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
PGAM5-204ENST00000543955 MED14O60244 1454 aa29.54■■■□□ 2.32
PGAM5-204ENST00000543955 QRICH2Q9H0J4 1663 aa29.52■■■□□ 2.32
PGAM5-204ENST00000543955 LMTK3Q96Q04 1460 aa29.5■■■□□ 2.31
PGAM5-204ENST00000543955 DLC1Q96QB1 1528 aa29.5■■■□□ 2.31
PGAM5-204ENST00000543955 LRPPRCP42704 1394 aaKnown RBP29.49■■■□□ 2.31
PGAM5-204ENST00000543955 TRAK1Q9UPV9 953 aa29.48■■■□□ 2.31
PGAM5-204ENST00000543955 METP08581 1390 aa29.47■■■□□ 2.31
PGAM5-204ENST00000543955 SBNO2Q9Y2G9 1366 aa29.47■■■□□ 2.31
PGAM5-204ENST00000543955 CENPJQ9HC77 1338 aaPredicted RBP29.45■■■□□ 2.31
PGAM5-204ENST00000543955 TESK2Q96S53 571 aa29.45■■■□□ 2.31
PGAM5-204ENST00000543955 TBX22Q9Y458 520 aa29.45■■■□□ 2.31
PGAM5-204ENST00000543955 NPHP4O75161 1426 aaPredicted RBP29.45■■■□□ 2.3
PGAM5-204ENST00000543955 CPS1P31327 1500 aa29.45■■■□□ 2.3
PGAM5-204ENST00000543955 SLC24A1O60721 1099 aa29.44■■■□□ 2.3
PGAM5-204ENST00000543955 TECPR2O15040 1411 aa29.44■■■□□ 2.3
PGAM5-204ENST00000543955 CCDC7Q96M83 1385 aa29.44■■■□□ 2.3
PGAM5-204ENST00000543955 ABCC11Q96J66 1382 aa29.43■■■□□ 2.3
PGAM5-204ENST00000543955 WASHC2AQ641Q2 1341 aa29.43■■■□□ 2.3
PGAM5-204ENST00000543955 STK26Q9P289 416 aa29.41■■■□□ 2.3
PGAM5-204ENST00000543955 PIK3R4Q99570 1358 aa29.41■■■□□ 2.3
PGAM5-204ENST00000543955 SLC26A8Q96RN1 970 aa29.41■■■□□ 2.3
PGAM5-204ENST00000543955 KIF7Q2M1P5 1343 aa29.4■■■□□ 2.3
PGAM5-204ENST00000543955 TMF1P82094 1093 aa29.4■■■□□ 2.3
PGAM5-204ENST00000543955 XRN1Q8IZH2 1706 aaKnown RBP29.39■■■□□ 2.29
PGAM5-204ENST00000543955 C11orf95C9JLR9 678 aaPredicted RBP29.39■■■□□ 2.29
PGAM5-204ENST00000543955 FAM135BQ49AJ0 1406 aa29.36■■■□□ 2.29
PGAM5-204ENST00000543955 CHD2O14647 1828 aaKnown RBP29.36■■■□□ 2.29
PGAM5-204ENST00000543955 DISP3Q9P2K9 1392 aa29.35■■■□□ 2.29
PGAM5-204ENST00000543955 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
PGAM5-204ENST00000543955 NCKAP5LQ9HCH0 1330 aa29.35■■■□□ 2.29
PGAM5-204ENST00000543955 PTPRUQ92729 1446 aa29.33■■■□□ 2.29
PGAM5-204ENST00000543955 CDCA8Q53HL2 280 aa29.33■■■□□ 2.29
PGAM5-204ENST00000543955 SIRT1Q96EB6 747 aa29.33■■■□□ 2.29
PGAM5-204ENST00000543955 PTCH1Q13635 1447 aa29.33■■■□□ 2.29
PGAM5-204ENST00000543955 PRAM1Q96QH2 718 aa29.32■■■□□ 2.28
PGAM5-204ENST00000543955 POGKQ9P215 609 aa29.32■■■□□ 2.28
PGAM5-204ENST00000543955 HSPA2P54652 639 aa29.31■■■□□ 2.28
PGAM5-204ENST00000543955 STRCQ7RTU9 1775 aa29.31■■■□□ 2.28
PGAM5-204ENST00000543955 DDX10Q13206 875 aaKnown RBP29.29■■■□□ 2.28
PGAM5-204ENST00000543955 NWD1Q149M9 1564 aa29.27■■■□□ 2.28
PGAM5-204ENST00000543955 TULP4Q9NRJ4 1543 aa29.27■■■□□ 2.28
PGAM5-204ENST00000543955 AMOTL2Q9Y2J4 779 aa29.26■■■□□ 2.28
PGAM5-204ENST00000543955 POLR3GLQ9BT43 218 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms