RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
PRAME-214ENST00000543184 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
PRAME-214ENST00000543184 ATP10AO60312 1499 aa18.9■□□□□ 0.62
PRAME-214ENST00000543184 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
PRAME-214ENST00000543184 NEFMP07197 916 aa18.89■□□□□ 0.62
PRAME-214ENST00000543184 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
PRAME-214ENST00000543184 MYBBP1AQ9BQG0 1328 aaKnown RBP18.88■□□□□ 0.61
PRAME-214ENST00000543184 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
PRAME-214ENST00000543184 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
PRAME-214ENST00000543184 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
PRAME-214ENST00000543184 CHGAP10645 457 aaKnown RBP18.86■□□□□ 0.61
PRAME-214ENST00000543184 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
PRAME-214ENST00000543184 ZMYM4Q5VZL5 1548 aa18.85■□□□□ 0.61
PRAME-214ENST00000543184 LRPPRCP42704 1394 aaKnown RBP18.85■□□□□ 0.61
PRAME-214ENST00000543184 KANK1Q14678 1352 aa18.84■□□□□ 0.61
PRAME-214ENST00000543184 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.61
PRAME-214ENST00000543184 CRBNQ96SW2 442 aa18.83■□□□□ 0.61
PRAME-214ENST00000543184 BACH2Q9BYV9 841 aa18.83■□□□□ 0.61
PRAME-214ENST00000543184 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
PRAME-214ENST00000543184 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
PRAME-214ENST00000543184 ARHGEF40Q8TER5 1519 aa18.81■□□□□ 0.6
PRAME-214ENST00000543184 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
PRAME-214ENST00000543184 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
PRAME-214ENST00000543184 BRD4O60885 1362 aaPredicted RBP18.8■□□□□ 0.6
PRAME-214ENST00000543184 RALBP1Q15311 655 aa18.8■□□□□ 0.6
PRAME-214ENST00000543184 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
PRAME-214ENST00000543184 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
PRAME-214ENST00000543184 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
PRAME-214ENST00000543184 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
PRAME-214ENST00000543184 NPATQ14207 1427 aa18.75■□□□□ 0.59
PRAME-214ENST00000543184 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
PRAME-214ENST00000543184 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
PRAME-214ENST00000543184 CEP152O94986 1710 aa18.74■□□□□ 0.59
PRAME-214ENST00000543184 UNC13BO14795 1591 aa18.74■□□□□ 0.59
PRAME-214ENST00000543184 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
PRAME-214ENST00000543184 PANK3Q9H999 370 aa18.74■□□□□ 0.59
PRAME-214ENST00000543184 PER1O15534 1290 aaPredicted RBP18.73■□□□□ 0.59
PRAME-214ENST00000543184 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
PRAME-214ENST00000543184 ABCC3O15438 1527 aa18.71■□□□□ 0.59
PRAME-214ENST00000543184 PRDM15P57071 1507 aaPredicted RBP18.71■□□□□ 0.59
PRAME-214ENST00000543184 CCDC144AA2RUR9 1427 aa18.7■□□□□ 0.58
PRAME-214ENST00000543184 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
PRAME-214ENST00000543184 DISP3Q9P2K9 1392 aa18.7■□□□□ 0.58
PRAME-214ENST00000543184 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
PRAME-214ENST00000543184 IQGAP3Q86VI3 1631 aa18.69■□□□□ 0.58
PRAME-214ENST00000543184 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
PRAME-214ENST00000543184 IDI1Q13907 227 aa18.69■□□□□ 0.58
PRAME-214ENST00000543184 ADAMTS8Q9UP79 889 aa18.69■□□□□ 0.58
PRAME-214ENST00000543184 DEPDC5O75140 1603 aa18.68■□□□□ 0.58
PRAME-214ENST00000543184 E9PCH4 1651 aa18.67■□□□□ 0.58
PRAME-214ENST00000543184 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
PRAME-214ENST00000543184 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
PRAME-214ENST00000543184 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
PRAME-214ENST00000543184 RGS3P49796 1198 aa18.66■□□□□ 0.58
PRAME-214ENST00000543184 CLTCQ00610 1675 aaKnown RBP18.65■□□□□ 0.58
PRAME-214ENST00000543184 MS4A1P11836 297 aa18.65■□□□□ 0.58
PRAME-214ENST00000543184 RNF17Q9BXT8 1623 aaKnown RBP18.65■□□□□ 0.58
PRAME-214ENST00000543184 PDE3BQ13370 1112 aa18.64■□□□□ 0.58
PRAME-214ENST00000543184 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
PRAME-214ENST00000543184 VWDEQ8N2E2 1590 aa18.63■□□□□ 0.57
PRAME-214ENST00000543184 AGLP35573 1532 aa18.63■□□□□ 0.57
PRAME-214ENST00000543184 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
PRAME-214ENST00000543184 TESK2Q96S53 571 aa18.62■□□□□ 0.57
PRAME-214ENST00000543184 CCDC146Q8IYE0 955 aa18.62■□□□□ 0.57
PRAME-214ENST00000543184 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
PRAME-214ENST00000543184 TET3O43151 1660 aa18.6■□□□□ 0.57
PRAME-214ENST00000543184 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
PRAME-214ENST00000543184 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.57
PRAME-214ENST00000543184 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.57
PRAME-214ENST00000543184 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
PRAME-214ENST00000543184 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
PRAME-214ENST00000543184 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
PRAME-214ENST00000543184 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
PRAME-214ENST00000543184 MADDQ8WXG6 1647 aa18.57■□□□□ 0.56
PRAME-214ENST00000543184 GSE1Q14687 1217 aa18.55■□□□□ 0.56
PRAME-214ENST00000543184 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
PRAME-214ENST00000543184 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
PRAME-214ENST00000543184 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
PRAME-214ENST00000543184 DUSP27Q5VZP5 1158 aa18.54■□□□□ 0.56
PRAME-214ENST00000543184 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
PRAME-214ENST00000543184 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
PRAME-214ENST00000543184 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
PRAME-214ENST00000543184 PTPRTO14522 1441 aa18.54■□□□□ 0.56
PRAME-214ENST00000543184 LMTK2Q8IWU2 1503 aa18.53■□□□□ 0.56
PRAME-214ENST00000543184 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.568e-17■□□□□ 8.1
PRAME-214ENST00000543184 DDRGK1Q96HY6 314 aa18.53■□□□□ 0.56
PRAME-214ENST00000543184 ERVK-7P63135 1459 aa18.53■□□□□ 0.56
PRAME-214ENST00000543184 TMF1P82094 1093 aa18.53■□□□□ 0.56
PRAME-214ENST00000543184 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.56
PRAME-214ENST00000543184 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
PRAME-214ENST00000543184 BCAR3O75815 825 aa18.52■□□□□ 0.56
PRAME-214ENST00000543184 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
PRAME-214ENST00000543184 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
PRAME-214ENST00000543184 PPP2R1AP30153 589 aa18.52■□□□□ 0.55
PRAME-214ENST00000543184 SYNMO15061 1565 aa18.52■□□□□ 0.55
PRAME-214ENST00000543184 NOS1P29475 1434 aa18.51■□□□□ 0.55
PRAME-214ENST00000543184 RIMS1Q86UR5 1692 aaKnown RBP18.51■□□□□ 0.55
PRAME-214ENST00000543184 SPHKAPQ2M3C7 1700 aa18.51■□□□□ 0.55
PRAME-214ENST00000543184 TNRQ92752 1358 aa18.51■□□□□ 0.55
PRAME-214ENST00000543184 TRPM2O94759 1503 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms