RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ARHGAP23Q9P227 1491 aa30.19■■■□□ 2.42
OTUB1-211ENST00000543004 ZFYVE9O95405 1425 aa30.18■■■□□ 2.42
OTUB1-211ENST00000543004 RIMS2Q9UQ26 1411 aa30.18■■■□□ 2.42
OTUB1-211ENST00000543004 LTKP29376 864 aa30.16■■■□□ 2.42
OTUB1-211ENST00000543004 SENP3Q9H4L4 574 aaPredicted RBP30.15■■■□□ 2.42
OTUB1-211ENST00000543004 L3MBTL2Q969R5 705 aa30.13■■■□□ 2.41
OTUB1-211ENST00000543004 POLR1AO95602 1720 aaPredicted RBP30.13■■■□□ 2.41
OTUB1-211ENST00000543004 STRCQ7RTU9 1775 aa30.12■■■□□ 2.41
OTUB1-211ENST00000543004 TXNDC2Q86VQ3 553 aa30.12■■■□□ 2.41
OTUB1-211ENST00000543004 NCKAP5LQ9HCH0 1330 aa30.12■■■□□ 2.41
OTUB1-211ENST00000543004 DCAF11Q8TEB1 546 aa30.11■■■□□ 2.41
OTUB1-211ENST00000543004 KDM2AQ9Y2K7 1162 aa30.1■■■□□ 2.41
OTUB1-211ENST00000543004 RPGRIP1LQ68CZ1 1315 aa30.09■■■□□ 2.41
OTUB1-211ENST00000543004 SCAF11Q99590 1463 aaKnown RBP30.09■■■□□ 2.41
OTUB1-211ENST00000543004 TONSLQ96HA7 1378 aa30.08■■■□□ 2.41
OTUB1-211ENST00000543004 ANKLE2Q86XL3 938 aa30.08■■■□□ 2.41
OTUB1-211ENST00000543004 EID1Q9Y6B2 187 aa30.07■■■□□ 2.4
OTUB1-211ENST00000543004 PPP1R15AO75807 674 aaPredicted RBP30.06■■■□□ 2.4
OTUB1-211ENST00000543004 ADGRF5Q8IZF2 1346 aa30.06■■■□□ 2.4
OTUB1-211ENST00000543004 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.04■■■□□ 2.4
OTUB1-211ENST00000543004 VGFO15240 615 aaPredicted RBP30.01■■■□□ 2.39
OTUB1-211ENST00000543004 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
OTUB1-211ENST00000543004 MYOM2P54296 1465 aa30■■■□□ 2.39
OTUB1-211ENST00000543004 IQGAP1P46940 1657 aa30■■■□□ 2.39
OTUB1-211ENST00000543004 NRXN3Q9Y4C0 1643 aa29.99■■■□□ 2.39
OTUB1-211ENST00000543004 MED14O60244 1454 aa29.98■■■□□ 2.39
OTUB1-211ENST00000543004 PLEKHG1Q9ULL1 1385 aa29.98■■■□□ 2.39
OTUB1-211ENST00000543004 NPHP4O75161 1426 aaPredicted RBP29.97■■■□□ 2.39
OTUB1-211ENST00000543004 NRXN1Q9ULB1 1477 aa29.96■■■□□ 2.39
OTUB1-211ENST00000543004 BCANQ96GW7 911 aa29.96■■■□□ 2.39
OTUB1-211ENST00000543004 PIK3C2GO75747 1445 aa29.93■■■□□ 2.38
OTUB1-211ENST00000543004 SETBP1Q9Y6X0 1596 aa29.93■■■□□ 2.38
OTUB1-211ENST00000543004 SLC26A8Q96RN1 970 aa29.93■■■□□ 2.38
OTUB1-211ENST00000543004 ADAMTS13Q76LX8 1427 aa29.91■■■□□ 2.38
OTUB1-211ENST00000543004 PRAG1Q86YV5 1406 aa29.91■■■□□ 2.38
OTUB1-211ENST00000543004 TIMELESSQ9UNS1 1208 aa29.91■■■□□ 2.38
OTUB1-211ENST00000543004 NBPF8Q3BBV2 869 aa29.9■■■□□ 2.38
OTUB1-211ENST00000543004 SETD1AO15047 1707 aaKnown RBP29.89■■■□□ 2.38
OTUB1-211ENST00000543004 ALKQ9UM73 1620 aa29.88■■■□□ 2.37
OTUB1-211ENST00000543004 STAC3Q96MF2 364 aa29.88■■■□□ 2.37
OTUB1-211ENST00000543004 CFAP70Q5T0N1 1121 aa29.87■■■□□ 2.37
OTUB1-211ENST00000543004 TRPM1Q7Z4N2 1603 aa29.83■■■□□ 2.37
OTUB1-211ENST00000543004 C14orf93Q9H972 538 aaKnown RBP29.82■■■□□ 2.36
OTUB1-211ENST00000543004 ASXL1Q8IXJ9 1541 aa29.81■■■□□ 2.36
OTUB1-211ENST00000543004 METP08581 1390 aa29.81■■■□□ 2.36
OTUB1-211ENST00000543004 LAMC1P11047 1609 aa29.8■■■□□ 2.36
OTUB1-211ENST00000543004 DIP2AQ14689 1571 aa29.8■■■□□ 2.36
OTUB1-211ENST00000543004 TMEM132EQ6IEE7 984 aa29.79■■■□□ 2.36
OTUB1-211ENST00000543004 TBX22Q9Y458 520 aa29.79■■■□□ 2.36
OTUB1-211ENST00000543004 KIAA1210Q9ULL0 1709 aa29.79■■■□□ 2.36
OTUB1-211ENST00000543004 NBPF1Q3BBV0 1214 aa29.78■■■□□ 2.36
OTUB1-211ENST00000543004 DMRT2Q9Y5R5 561 aa29.78■■■□□ 2.36
OTUB1-211ENST00000543004 ADGRB1O14514 1584 aa29.74■■■□□ 2.35
OTUB1-211ENST00000543004 CHD2O14647 1828 aaKnown RBP29.74■■■□□ 2.35
OTUB1-211ENST00000543004 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
OTUB1-211ENST00000543004 STRCP1A6NGW2 1772 aa29.74■■■□□ 2.35
OTUB1-211ENST00000543004 RALGAPBQ86X10 1494 aa29.7■■■□□ 2.34
OTUB1-211ENST00000543004 ZNF335Q9H4Z2 1342 aaPredicted RBP29.69■■■□□ 2.34
OTUB1-211ENST00000543004 ROCK2O75116 1388 aaKnown RBP29.68■■■□□ 2.34
OTUB1-211ENST00000543004 STK26Q9P289 416 aa29.67■■■□□ 2.34
OTUB1-211ENST00000543004 XRN1Q8IZH2 1706 aaKnown RBP29.66■■■□□ 2.34
OTUB1-211ENST00000543004 YTHDC2Q9H6S0 1430 aaKnown RBP29.65■■■□□ 2.34
OTUB1-211ENST00000543004 AMOTL2Q9Y2J4 779 aa29.65■■■□□ 2.34
OTUB1-211ENST00000543004 PIK3R4Q99570 1358 aa29.65■■■□□ 2.34
OTUB1-211ENST00000543004 NWD1Q149M9 1564 aa29.64■■■□□ 2.33
OTUB1-211ENST00000543004 KCNA6P17658 529 aa29.63■■■□□ 2.33
OTUB1-211ENST00000543004 LRPPRCP42704 1394 aaKnown RBP29.61■■■□□ 2.33
OTUB1-211ENST00000543004 GPRASP1Q5JY77 1395 aa29.6■■■□□ 2.33
OTUB1-211ENST00000543004 TRAK1Q9UPV9 953 aa29.6■■■□□ 2.33
OTUB1-211ENST00000543004 KNDC1Q76NI1 1749 aa29.6■■■□□ 2.33
OTUB1-211ENST00000543004 CARD11Q9BXL7 1154 aa29.6■■■□□ 2.33
OTUB1-211ENST00000543004 ZEB1P37275 1124 aaPredicted RBP29.58■■■□□ 2.33
OTUB1-211ENST00000543004 RBM33Q96EV2 1170 aaKnown RBP29.57■■■□□ 2.32
OTUB1-211ENST00000543004 ARHGEF28Q8N1W1 1705 aaKnown RBP29.57■■■□□ 2.32
OTUB1-211ENST00000543004 ROBO2Q9HCK4 1378 aa29.57■■■□□ 2.32
OTUB1-211ENST00000543004 ABCC11Q96J66 1382 aa29.56■■■□□ 2.32
OTUB1-211ENST00000543004 CPS1P31327 1500 aa29.55■■■□□ 2.32
OTUB1-211ENST00000543004 LTBP4Q8N2S1 1624 aa29.54■■■□□ 2.32
OTUB1-211ENST00000543004 TECPR2O15040 1411 aa29.54■■■□□ 2.32
OTUB1-211ENST00000543004 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
OTUB1-211ENST00000543004 PLEKHH1Q9ULM0 1364 aa29.52■■■□□ 2.32
OTUB1-211ENST00000543004 NKTRP30414 1462 aaKnown RBP29.51■■■□□ 2.31
OTUB1-211ENST00000543004 XIRP1Q702N8 1843 aaKnown RBP29.51■■■□□ 2.31
OTUB1-211ENST00000543004 DLC1Q96QB1 1528 aa29.5■■■□□ 2.31
OTUB1-211ENST00000543004 PTCH1Q13635 1447 aa29.5■■■□□ 2.31
OTUB1-211ENST00000543004 SAFB2Q14151 953 aaKnown RBP eCLIP29.49■■■□□ 2.31
OTUB1-211ENST00000543004 PROSER2Q86WR7 435 aaPredicted RBP29.49■■■□□ 2.31
OTUB1-211ENST00000543004 PRAM1Q96QH2 718 aa29.49■■■□□ 2.31
OTUB1-211ENST00000543004 LRRC7Q96NW7 1537 aa29.48■■■□□ 2.31
OTUB1-211ENST00000543004 USP47Q96K76 1375 aa29.45■■■□□ 2.31
OTUB1-211ENST00000543004 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.45■■■□□ 2.3
OTUB1-211ENST00000543004 TMEM94Q12767 1356 aa29.44■■■□□ 2.3
OTUB1-211ENST00000543004 FAM135BQ49AJ0 1406 aa29.44■■■□□ 2.3
OTUB1-211ENST00000543004 POGKQ9P215 609 aa29.44■■■□□ 2.3
OTUB1-211ENST00000543004 SIRT1Q96EB6 747 aa29.42■■■□□ 2.3
OTUB1-211ENST00000543004 QRICH2Q9H0J4 1663 aa29.42■■■□□ 2.3
OTUB1-211ENST00000543004 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
OTUB1-211ENST00000543004 CENPJQ9HC77 1338 aaPredicted RBP29.39■■■□□ 2.3
OTUB1-211ENST00000543004 ST20-MTHFSA0A0A6YYL1 179 aa29.39■■■□□ 2.3
OTUB1-211ENST00000543004 HIRIP3Q9BW71 556 aaPredicted RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms