RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 POLR3GLQ9BT43 218 aa7.5□□□□□ -1.21
ZEB1-209ENST00000542879 RCAN3Q9UKA8 241 aa7.5□□□□□ -1.21
ZEB1-209ENST00000542879 MS4A1P11836 297 aa7.5□□□□□ -1.21
ZEB1-209ENST00000542879 NLRP13Q86W25 1043 aa7.5□□□□□ -1.21
ZEB1-209ENST00000542879 BACH2Q9BYV9 841 aa7.5□□□□□ -1.21
ZEB1-209ENST00000542879 PLA2R1Q13018 1463 aa7.49□□□□□ -1.21
ZEB1-209ENST00000542879 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
ZEB1-209ENST00000542879 A2MP01023 1474 aa7.49□□□□□ -1.21
ZEB1-209ENST00000542879 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
ZEB1-209ENST00000542879 TET3O43151 1660 aa7.49□□□□□ -1.21
ZEB1-209ENST00000542879 IQGAP1P46940 1657 aa7.49□□□□□ -1.21
ZEB1-209ENST00000542879 PDE4AP27815 886 aa7.48□□□□□ -1.21
ZEB1-209ENST00000542879 ZNF518AQ6AHZ1 1483 aa7.48□□□□□ -1.21
ZEB1-209ENST00000542879 CCDC141Q6ZP82 1450 aa7.48□□□□□ -1.21
ZEB1-209ENST00000542879 RIMS1Q86UR5 1692 aaKnown RBP7.48□□□□□ -1.21
ZEB1-209ENST00000542879 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
ZEB1-209ENST00000542879 ZNF777Q9ULD5 760 aaPredicted RBP7.48□□□□□ -1.21
ZEB1-209ENST00000542879 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
ZEB1-209ENST00000542879 LMTK3Q96Q04 1460 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 CAMSAP1Q5T5Y3 1602 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 IL27Q8NEV9 243 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 DCAF11Q8TEB1 546 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 ATP10AO60312 1499 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 C3P01024 1663 aa7.47□□□□□ -1.21
ZEB1-209ENST00000542879 SPATA31D1Q6ZQQ2 1576 aa7.46□□□□□ -1.21
ZEB1-209ENST00000542879 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.21
ZEB1-209ENST00000542879 MYOM1P52179 1685 aa7.46□□□□□ -1.21
ZEB1-209ENST00000542879 TESK2Q96S53 571 aa7.46□□□□□ -1.22
ZEB1-209ENST00000542879 ATP7AQ04656 1500 aa7.46□□□□□ -1.22
ZEB1-209ENST00000542879 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
ZEB1-209ENST00000542879 SETD1AO15047 1707 aaKnown RBP7.46□□□□□ -1.22
ZEB1-209ENST00000542879 USP35Q9P2H5 1018 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 KDM2AQ9Y2K7 1162 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 CEP152O94986 1710 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 SPHKAPQ2M3C7 1700 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-209ENST00000542879 CCDC144AA2RUR9 1427 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 KDM2BQ8NHM5 1336 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 ERBINQ96RT1 1412 aa7.45□□□□□ -1.22
ZEB1-209ENST00000542879 SYCP2Q9BX26 1530 aa7.44□□□□□ -1.22
ZEB1-209ENST00000542879 EFCAB6Q5THR3 1501 aa7.44□□□□□ -1.22
ZEB1-209ENST00000542879 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
ZEB1-209ENST00000542879 SYNMO15061 1565 aa7.44□□□□□ -1.22
ZEB1-209ENST00000542879 UGGT1Q9NYU2 1555 aa7.44□□□□□ -1.22
ZEB1-209ENST00000542879 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
ZEB1-209ENST00000542879 KNDC1Q76NI1 1749 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 PLEKHD1A6NEE1 506 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 DUOX2Q9NRD8 1548 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 TSPY4P0CV99 314 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 TSPY10P0CW01 314 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 ARHGAP31Q2M1Z3 1444 aa7.43□□□□□ -1.22
ZEB1-209ENST00000542879 HNRNPMP52272 730 aaKnown RBP eCLIP7.42□□□□□ -1.224e-6■■■■□ 20.1
ZEB1-209ENST00000542879 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 KIAA1210Q9ULL0 1709 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 ZNF521Q96K83 1311 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 PLIN1O60240 522 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 IQSEC2Q5JU85 1478 aa7.42□□□□□ -1.22
ZEB1-209ENST00000542879 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
ZEB1-209ENST00000542879 NWD1Q149M9 1564 aa7.41□□□□□ -1.22
ZEB1-209ENST00000542879 PPM1GO15355 546 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-209ENST00000542879 PLEKHH1Q9ULM0 1364 aa7.41□□□□□ -1.22
ZEB1-209ENST00000542879 NEFMP07197 916 aa7.4□□□□□ -1.22
ZEB1-209ENST00000542879 RSPH4AQ5TD94 716 aa7.4□□□□□ -1.22
ZEB1-209ENST00000542879 PANK3Q9H999 370 aa7.4□□□□□ -1.22
ZEB1-209ENST00000542879 LAS1LQ9Y4W2 734 aaKnown RBP7.4□□□□□ -1.22
ZEB1-209ENST00000542879 SKAP1Q86WV1 359 aa7.4□□□□□ -1.22
ZEB1-209ENST00000542879 NPATQ14207 1427 aa7.4□□□□□ -1.23
ZEB1-209ENST00000542879 C20orf194Q5TEA3 1177 aa7.4□□□□□ -1.23
ZEB1-209ENST00000542879 CC2D1BQ5T0F9 858 aaKnown RBP7.39□□□□□ -1.23
ZEB1-209ENST00000542879 DDRGK1Q96HY6 314 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 TSPOAP1O95153 1857 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 FANCAO15360 1455 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 PIK3C2GO75747 1445 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 CD109Q6YHK3 1445 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 DIP2AQ14689 1571 aa7.39□□□□□ -1.23
ZEB1-209ENST00000542879 ARHGAP5Q13017 1502 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 ASXL1Q8IXJ9 1541 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 UBR1Q8IWV7 1749 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 TRPM2O94759 1503 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 ADAMTS8Q9UP79 889 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 TMF1P82094 1093 aa7.38□□□□□ -1.23
ZEB1-209ENST00000542879 CENPQQ7L2Z9 268 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-209ENST00000542879 TRMT2AQ8IZ69 625 aaKnown RBP7.38□□□□□ -1.23
ZEB1-209ENST00000542879 CLTCL1P53675 1640 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 SCAPERQ9BY12 1400 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 PKNOX2Q96KN3 472 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 NPC1L1Q9UHC9 1359 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 AMER1Q5JTC6 1135 aaPredicted RBP7.37□□□□□ -1.23
ZEB1-209ENST00000542879 USP54Q70EL1 1684 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 PPP2R1AP30153 589 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
ZEB1-209ENST00000542879 SHPRHQ149N8 1683 aa7.36□□□□□ -1.23
ZEB1-209ENST00000542879 EIF3AQ14152 1382 aaKnown RBP7.35□□□□□ -1.23
ZEB1-209ENST00000542879 NFKBIBQ15653 356 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 TMEM131LA2VDJ0 1609 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 SCAF11Q99590 1463 aaKnown RBP7.35□□□□□ -1.23
ZEB1-209ENST00000542879 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms