RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 DIP2AQ14689 1571 aa15.33■□□□□ 0.05
AC009509.3-201ENST00000542428 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
AC009509.3-201ENST00000542428 RIMS2Q9UQ26 1411 aa15.33■□□□□ 0.04
AC009509.3-201ENST00000542428 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
AC009509.3-201ENST00000542428 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
AC009509.3-201ENST00000542428 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
AC009509.3-201ENST00000542428 HSPA2P54652 639 aa15.31■□□□□ 0.04
AC009509.3-201ENST00000542428 MED14O60244 1454 aa15.31■□□□□ 0.04
AC009509.3-201ENST00000542428 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
AC009509.3-201ENST00000542428 CHD2O14647 1828 aaKnown RBP15.29■□□□□ 0.04
AC009509.3-201ENST00000542428 CHGAP10645 457 aaKnown RBP15.29■□□□□ 0.04
AC009509.3-201ENST00000542428 XRN1Q8IZH2 1706 aaKnown RBP15.29■□□□□ 0.04
AC009509.3-201ENST00000542428 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
AC009509.3-201ENST00000542428 ASXL1Q8IXJ9 1541 aa15.28■□□□□ 0.04
AC009509.3-201ENST00000542428 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
AC009509.3-201ENST00000542428 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
AC009509.3-201ENST00000542428 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
AC009509.3-201ENST00000542428 XIRP1Q702N8 1843 aaKnown RBP15.26■□□□□ 0.03
AC009509.3-201ENST00000542428 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
AC009509.3-201ENST00000542428 PIK3C2GO75747 1445 aa15.25■□□□□ 0.03
AC009509.3-201ENST00000542428 ARHGEF28Q8N1W1 1705 aaKnown RBP15.24■□□□□ 0.03
AC009509.3-201ENST00000542428 THEMISQ8N1K5 641 aaPredicted RBP15.24■□□□□ 0.03
AC009509.3-201ENST00000542428 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
AC009509.3-201ENST00000542428 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
AC009509.3-201ENST00000542428 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
AC009509.3-201ENST00000542428 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
AC009509.3-201ENST00000542428 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
AC009509.3-201ENST00000542428 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
AC009509.3-201ENST00000542428 ADAMTS13Q76LX8 1427 aa15.22■□□□□ 0.03
AC009509.3-201ENST00000542428 LTKP29376 864 aa15.21■□□□□ 0.03
AC009509.3-201ENST00000542428 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
AC009509.3-201ENST00000542428 RGL3Q3MIN7 710 aa15.2■□□□□ 0.02
AC009509.3-201ENST00000542428 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
AC009509.3-201ENST00000542428 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
AC009509.3-201ENST00000542428 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
AC009509.3-201ENST00000542428 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
AC009509.3-201ENST00000542428 PRAG1Q86YV5 1406 aa15.18■□□□□ 0.02
AC009509.3-201ENST00000542428 CPS1P31327 1500 aa15.18■□□□□ 0.02
AC009509.3-201ENST00000542428 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
AC009509.3-201ENST00000542428 PPP1R15AO75807 674 aaPredicted RBP15.17■□□□□ 0.02
AC009509.3-201ENST00000542428 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
AC009509.3-201ENST00000542428 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
AC009509.3-201ENST00000542428 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
AC009509.3-201ENST00000542428 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
AC009509.3-201ENST00000542428 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
AC009509.3-201ENST00000542428 QRICH2Q9H0J4 1663 aa15.16■□□□□ 0.02
AC009509.3-201ENST00000542428 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC009509.3-201ENST00000542428 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
AC009509.3-201ENST00000542428 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
AC009509.3-201ENST00000542428 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
AC009509.3-201ENST00000542428 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
AC009509.3-201ENST00000542428 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
AC009509.3-201ENST00000542428 L3MBTL2Q969R5 705 aa15.11■□□□□ 0.01
AC009509.3-201ENST00000542428 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
AC009509.3-201ENST00000542428 HDGFP51858 240 aaKnown RBP15.09■□□□□ 0.01
AC009509.3-201ENST00000542428 METP08581 1390 aa15.09■□□□□ 0.01
AC009509.3-201ENST00000542428 DLC1Q96QB1 1528 aa15.08■□□□□ 0.01
AC009509.3-201ENST00000542428 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
AC009509.3-201ENST00000542428 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.08■□□□□ 0
AC009509.3-201ENST00000542428 PIK3R4Q99570 1358 aa15.08■□□□□ 0
AC009509.3-201ENST00000542428 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
AC009509.3-201ENST00000542428 PTCH1Q13635 1447 aa15.07■□□□□ 0
AC009509.3-201ENST00000542428 ADGRB2O60241 1585 aa15.07■□□□□ 0
AC009509.3-201ENST00000542428 TECPR2O15040 1411 aa15.06■□□□□ 0
AC009509.3-201ENST00000542428 BCANQ96GW7 911 aa15.05■□□□□ -0
AC009509.3-201ENST00000542428 ZNF335Q9H4Z2 1342 aaPredicted RBP15.05■□□□□ -0
AC009509.3-201ENST00000542428 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
AC009509.3-201ENST00000542428 FMN2Q9NZ56 1722 aa15.05■□□□□ -0
AC009509.3-201ENST00000542428 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
AC009509.3-201ENST00000542428 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
AC009509.3-201ENST00000542428 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
AC009509.3-201ENST00000542428 CDC42BPGQ6DT37 1551 aa15.03■□□□□ -0
AC009509.3-201ENST00000542428 CFAP70Q5T0N1 1121 aa15.03■□□□□ -0
AC009509.3-201ENST00000542428 STAC3Q96MF2 364 aa15.03■□□□□ -0
AC009509.3-201ENST00000542428 NBPF8Q3BBV2 869 aa15.02■□□□□ -0
AC009509.3-201ENST00000542428 ITSN1Q15811 1721 aa15.02□□□□□ -0.01
AC009509.3-201ENST00000542428 GPRASP1Q5JY77 1395 aa15.01□□□□□ -0.01
AC009509.3-201ENST00000542428 TOPAZ1Q8N9V7 1692 aa15.01□□□□□ -0.01
AC009509.3-201ENST00000542428 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
AC009509.3-201ENST00000542428 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
AC009509.3-201ENST00000542428 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
AC009509.3-201ENST00000542428 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
AC009509.3-201ENST00000542428 TIMELESSQ9UNS1 1208 aa14.99□□□□□ -0.01
AC009509.3-201ENST00000542428 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
AC009509.3-201ENST00000542428 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
AC009509.3-201ENST00000542428 ROBO2Q9HCK4 1378 aa14.98□□□□□ -0.01
AC009509.3-201ENST00000542428 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
AC009509.3-201ENST00000542428 KCNA6P17658 529 aa14.96□□□□□ -0.01
AC009509.3-201ENST00000542428 FAM135BQ49AJ0 1406 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 ADGRL3Q9HAR2 1447 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 MYOM1P52179 1685 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 PLEKHH1Q9ULM0 1364 aa14.95□□□□□ -0.02
AC009509.3-201ENST00000542428 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
AC009509.3-201ENST00000542428 TMEM94Q12767 1356 aa14.93□□□□□ -0.02
AC009509.3-201ENST00000542428 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
AC009509.3-201ENST00000542428 ROBO1Q9Y6N7 1651 aa14.92□□□□□ -0.02
AC009509.3-201ENST00000542428 EIF3AQ14152 1382 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms