RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SPHKAPQ2M3C7 1700 aa10.89□□□□□ -0.67
PDLIM5-221ENST00000542407 A2MP01023 1474 aa10.89□□□□□ -0.67
PDLIM5-221ENST00000542407 CYB5RLQ6IPT4 315 aa10.89□□□□□ -0.67
PDLIM5-221ENST00000542407 NBR1Q14596 966 aa10.89□□□□□ -0.67
PDLIM5-221ENST00000542407 LMTK2Q8IWU2 1503 aa10.88□□□□□ -0.67
PDLIM5-221ENST00000542407 TRPM1Q7Z4N2 1603 aa10.88□□□□□ -0.67
PDLIM5-221ENST00000542407 PPRC1Q5VV67 1664 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 CEP152O94986 1710 aa10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 PRAG1Q86YV5 1406 aa10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 FANCIQ9NVI1 1328 aa10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 EFCAB6Q5THR3 1501 aa10.87□□□□□ -0.67
PDLIM5-221ENST00000542407 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-221ENST00000542407 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
PDLIM5-221ENST00000542407 CCDC7Q96M83 1385 aa10.85□□□□□ -0.67
PDLIM5-221ENST00000542407 NEURL4Q96JN8 1562 aa10.85□□□□□ -0.67
PDLIM5-221ENST00000542407 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
PDLIM5-221ENST00000542407 USP47Q96K76 1375 aa10.85□□□□□ -0.67
PDLIM5-221ENST00000542407 LAMC1P11047 1609 aa10.84□□□□□ -0.67
PDLIM5-221ENST00000542407 KIF3BO15066 747 aa10.84□□□□□ -0.67
PDLIM5-221ENST00000542407 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
PDLIM5-221ENST00000542407 KANK1Q14678 1352 aa10.83□□□□□ -0.68
PDLIM5-221ENST00000542407 CNTLNQ9NXG0 1405 aa10.83□□□□□ -0.68
PDLIM5-221ENST00000542407 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.68
PDLIM5-221ENST00000542407 GPRASP1Q5JY77 1395 aa10.83□□□□□ -0.68
PDLIM5-221ENST00000542407 MADDQ8WXG6 1647 aa10.82□□□□□ -0.68
PDLIM5-221ENST00000542407 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
PDLIM5-221ENST00000542407 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-221ENST00000542407 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
PDLIM5-221ENST00000542407 UGGT1Q9NYU2 1555 aa10.8□□□□□ -0.68
PDLIM5-221ENST00000542407 ABCC3O15438 1527 aa10.8□□□□□ -0.68
PDLIM5-221ENST00000542407 YEATS2Q9ULM3 1422 aa10.79□□□□□ -0.68
PDLIM5-221ENST00000542407 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
PDLIM5-221ENST00000542407 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
PDLIM5-221ENST00000542407 IFT172Q9UG01 1749 aa10.79□□□□□ -0.68
PDLIM5-221ENST00000542407 CAMSAP1Q5T5Y3 1602 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 CCER2I3L3R5 266 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 RGL3Q3MIN7 710 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 NPATQ14207 1427 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
PDLIM5-221ENST00000542407 SIGLEC1Q9BZZ2 1709 aa10.77□□□□□ -0.68
PDLIM5-221ENST00000542407 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-221ENST00000542407 ANP32CO43423 234 aa10.77□□□□□ -0.69
PDLIM5-221ENST00000542407 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
PDLIM5-221ENST00000542407 TSPOAP1O95153 1857 aa10.77□□□□□ -0.69
PDLIM5-221ENST00000542407 ADGRB3O60242 1522 aa10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 ARID4BQ4LE39 1312 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 REREQ9P2R6 1566 aa10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 TMEM132AQ24JP5 1023 aa10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
PDLIM5-221ENST00000542407 KIF1BO60333 1816 aa10.75□□□□□ -0.69
PDLIM5-221ENST00000542407 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-221ENST00000542407 MYOM2P54296 1465 aa10.75□□□□□ -0.69
PDLIM5-221ENST00000542407 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
PDLIM5-221ENST00000542407 PIK3C2BO00750 1634 aa10.75□□□□□ -0.69
PDLIM5-221ENST00000542407 NRXN1Q9ULB1 1477 aa10.74□□□□□ -0.69
PDLIM5-221ENST00000542407 NOS1P29475 1434 aa10.74□□□□□ -0.69
PDLIM5-221ENST00000542407 ST20-MTHFSA0A0A6YYL1 179 aa10.74□□□□□ -0.69
PDLIM5-221ENST00000542407 SYNMO15061 1565 aa10.73□□□□□ -0.69
PDLIM5-221ENST00000542407 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-221ENST00000542407 ARHGAP31Q2M1Z3 1444 aa10.73□□□□□ -0.69
PDLIM5-221ENST00000542407 RTL5Q5HYW3 569 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-221ENST00000542407 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
PDLIM5-221ENST00000542407 STAC3Q96MF2 364 aa10.72□□□□□ -0.69
PDLIM5-221ENST00000542407 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-221ENST00000542407 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-221ENST00000542407 GGT6Q6P531 493 aa10.71□□□□□ -0.69
PDLIM5-221ENST00000542407 AGLP35573 1532 aa10.71□□□□□ -0.69
PDLIM5-221ENST00000542407 PPLO60437 1756 aa10.71□□□□□ -0.7
PDLIM5-221ENST00000542407 TESK2Q96S53 571 aa10.7□□□□□ -0.7
PDLIM5-221ENST00000542407 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-221ENST00000542407 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
PDLIM5-221ENST00000542407 WASHC2CQ9Y4E1 1318 aa10.69□□□□□ -0.7
PDLIM5-221ENST00000542407 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
PDLIM5-221ENST00000542407 HNRNPUQ00839 825 aaKnown RBP eCLIP10.69□□□□□ -0.7
PDLIM5-221ENST00000542407 PREX1Q8TCU6 1659 aa10.68□□□□□ -0.7
PDLIM5-221ENST00000542407 DISP3Q9P2K9 1392 aa10.68□□□□□ -0.7
PDLIM5-221ENST00000542407 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-221ENST00000542407 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
PDLIM5-221ENST00000542407 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 CFAP65Q6ZU64 1925 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 SETBP1Q9Y6X0 1596 aa10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 NEXMIFQ5QGS0 1516 aa10.66□□□□□ -0.7
PDLIM5-221ENST00000542407 CCDC184Q52MB2 194 aa10.65□□□□□ -0.7
PDLIM5-221ENST00000542407 MYO3AQ8NEV4 1616 aa10.65□□□□□ -0.7
PDLIM5-221ENST00000542407 ADGRB1O14514 1584 aa10.64□□□□□ -0.71
PDLIM5-221ENST00000542407 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-221ENST00000542407 TMEM131LA2VDJ0 1609 aa10.64□□□□□ -0.71
PDLIM5-221ENST00000542407 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
PDLIM5-221ENST00000542407 CLTCQ00610 1675 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-221ENST00000542407 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
PDLIM5-221ENST00000542407 MYOM1P52179 1685 aa10.63□□□□□ -0.71
PDLIM5-221ENST00000542407 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms