RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 ZFYVE9O95405 1425 aa29.6■■■□□ 2.33
RAP1B-227ENST00000542018 CHD2O14647 1828 aaKnown RBP29.58■■■□□ 2.33
RAP1B-227ENST00000542018 SLC52A1Q9NWF4 448 aa29.58■■■□□ 2.33
RAP1B-227ENST00000542018 PHLPP1O60346 1717 aa29.54■■■□□ 2.32
RAP1B-227ENST00000542018 SLAIN2Q9P270 581 aa29.54■■■□□ 2.32
RAP1B-227ENST00000542018 RPRD2Q5VT52 1461 aaKnown RBP29.54■■■□□ 2.32
RAP1B-227ENST00000542018 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
RAP1B-227ENST00000542018 MSH6P52701 1360 aa29.53■■■□□ 2.32
RAP1B-227ENST00000542018 APLP2Q06481 763 aa29.53■■■□□ 2.32
RAP1B-227ENST00000542018 TMEM131LA2VDJ0 1609 aa29.53■■■□□ 2.32
RAP1B-227ENST00000542018 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
RAP1B-227ENST00000542018 SETD1AO15047 1707 aaKnown RBP29.5■■■□□ 2.31
RAP1B-227ENST00000542018 ANKRD50Q9ULJ7 1429 aa29.49■■■□□ 2.31
RAP1B-227ENST00000542018 RIMS2Q9UQ26 1411 aa29.49■■■□□ 2.31
RAP1B-227ENST00000542018 BCANQ96GW7 911 aa29.49■■■□□ 2.31
RAP1B-227ENST00000542018 COL16A1Q07092 1604 aaPredicted RBP29.49■■■□□ 2.31
RAP1B-227ENST00000542018 JCADQ9P266 1359 aa29.46■■■□□ 2.31
RAP1B-227ENST00000542018 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
RAP1B-227ENST00000542018 ADAMTS13Q76LX8 1427 aa29.42■■■□□ 2.3
RAP1B-227ENST00000542018 LRP6O75581 1613 aa29.42■■■□□ 2.3
RAP1B-227ENST00000542018 UNC13BO14795 1591 aa29.4■■■□□ 2.3
RAP1B-227ENST00000542018 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
RAP1B-227ENST00000542018 NCOA3Q9Y6Q9 1424 aa29.39■■■□□ 2.3
RAP1B-227ENST00000542018 PPP1R15AO75807 674 aaPredicted RBP29.39■■■□□ 2.3
RAP1B-227ENST00000542018 E9PCH4 1651 aa29.39■■■□□ 2.3
RAP1B-227ENST00000542018 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.38■■■□□ 2.29
RAP1B-227ENST00000542018 NUTM2DQ5VT03 806 aaPredicted RBP29.36■■■□□ 2.29
RAP1B-227ENST00000542018 HDGFP51858 240 aaKnown RBP29.35■■■□□ 2.29
RAP1B-227ENST00000542018 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
RAP1B-227ENST00000542018 DIP2AQ14689 1571 aa29.33■■■□□ 2.29
RAP1B-227ENST00000542018 CHGAP10645 457 aaKnown RBP29.31■■■□□ 2.28
RAP1B-227ENST00000542018 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.31■■■□□ 2.28
RAP1B-227ENST00000542018 PTPRUQ92729 1446 aa29.3■■■□□ 2.28
RAP1B-227ENST00000542018 SHPRHQ149N8 1683 aa29.3■■■□□ 2.28
RAP1B-227ENST00000542018 PIK3R4Q99570 1358 aa29.29■■■□□ 2.28
RAP1B-227ENST00000542018 SPATA31A6Q5VVP1 1343 aa29.29■■■□□ 2.28
RAP1B-227ENST00000542018 C19orf44Q9H6X5 657 aa29.29■■■□□ 2.28
RAP1B-227ENST00000542018 IQGAP3Q86VI3 1631 aa29.28■■■□□ 2.28
RAP1B-227ENST00000542018 C14orf37Q86TY3 774 aa29.27■■■□□ 2.28
RAP1B-227ENST00000542018 CADPS2Q86UW7 1296 aa29.27■■■□□ 2.28
RAP1B-227ENST00000542018 TRPM2O94759 1503 aa29.24■■■□□ 2.27
RAP1B-227ENST00000542018 NRXN3Q9Y4C0 1643 aa29.23■■■□□ 2.27
RAP1B-227ENST00000542018 ATF3P18847 181 aa29.22■■■□□ 2.27
RAP1B-227ENST00000542018 BRINP3Q76B58 766 aa29.22■■■□□ 2.27
RAP1B-227ENST00000542018 AMOTL2Q9Y2J4 779 aa29.22■■■□□ 2.27
RAP1B-227ENST00000542018 ROCK1Q13464 1354 aa29.21■■■□□ 2.27
RAP1B-227ENST00000542018 UPF1Q92900 1129 aaKnown RBP eCLIP29.2■■■□□ 2.26
RAP1B-227ENST00000542018 XRN1Q8IZH2 1706 aaKnown RBP29.2■■■□□ 2.26
RAP1B-227ENST00000542018 MEX3CQ5U5Q3 659 aaKnown RBP29.19■■■□□ 2.26
RAP1B-227ENST00000542018 ZNF772Q68DY9 489 aaPredicted RBP29.19■■■□□ 2.26
RAP1B-227ENST00000542018 TRIM52Q96A61 297 aa29.17■■■□□ 2.26
RAP1B-227ENST00000542018 ASXL1Q8IXJ9 1541 aa29.15■■■□□ 2.26
RAP1B-227ENST00000542018 NUP155O75694 1391 aa29.15■■■□□ 2.26
RAP1B-227ENST00000542018 DCCP43146 1447 aa29.15■■■□□ 2.26
RAP1B-227ENST00000542018 SETBP1Q9Y6X0 1596 aa29.14■■■□□ 2.26
RAP1B-227ENST00000542018 MST1RQ04912 1400 aa29.12■■■□□ 2.25
RAP1B-227ENST00000542018 NHSL1Q5SYE7 1610 aa29.12■■■□□ 2.25
RAP1B-227ENST00000542018 SETD5Q9C0A6 1442 aa29.11■■■□□ 2.25
RAP1B-227ENST00000542018 NUTM2BA6NNL0 878 aaPredicted RBP29.1■■■□□ 2.25
RAP1B-227ENST00000542018 NUTM2EB1AL46 878 aaPredicted RBP29.1■■■□□ 2.25
RAP1B-227ENST00000542018 NUTM2AQ8IVF1 878 aaPredicted RBP29.1■■■□□ 2.25
RAP1B-227ENST00000542018 METP08581 1390 aa29.1■■■□□ 2.25
RAP1B-227ENST00000542018 SPHKAPQ2M3C7 1700 aa29.08■■■□□ 2.25
RAP1B-227ENST00000542018 RXRBP28702 533 aa29.08■■■□□ 2.25
RAP1B-227ENST00000542018 CDK12Q9NYV4 1490 aaPredicted RBP29.07■■■□□ 2.24
RAP1B-227ENST00000542018 AFF2P51816 1311 aa29.05■■■□□ 2.24
RAP1B-227ENST00000542018 DDX17Q92841 729 aaKnown RBP29.03■■■□□ 2.24
RAP1B-227ENST00000542018 NALCNQ8IZF0 1738 aa29.03■■■□□ 2.24
RAP1B-227ENST00000542018 ITGAEP38570 1179 aa29■■■□□ 2.23
RAP1B-227ENST00000542018 ADGRL3Q9HAR2 1447 aa29■■■□□ 2.23
RAP1B-227ENST00000542018 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
RAP1B-227ENST00000542018 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
RAP1B-227ENST00000542018 CLTCL1P53675 1640 aa28.98■■■□□ 2.23
RAP1B-227ENST00000542018 LRRC59Q96AG4 307 aaKnown RBP28.98■■■□□ 2.23
RAP1B-227ENST00000542018 RGS12O14924 1447 aa28.96■■■□□ 2.23
RAP1B-227ENST00000542018 ZNF326Q5BKZ1 582 aaKnown RBP28.96■■■□□ 2.23
RAP1B-227ENST00000542018 C8orf37Q96NL8 207 aa28.93■■■□□ 2.22
RAP1B-227ENST00000542018 LAMC1P11047 1609 aa28.92■■■□□ 2.22
RAP1B-227ENST00000542018 C1orf167Q5SNV9 1468 aa28.91■■■□□ 2.22
RAP1B-227ENST00000542018 QTRT2Q9H974 415 aaKnown RBP28.9■■■□□ 2.22
RAP1B-227ENST00000542018 RBM6P78332 1123 aaKnown RBP28.88■■■□□ 2.21
RAP1B-227ENST00000542018 SRCAPQ6ZRS2 3230 aa28.88■■■□□ 2.21
RAP1B-227ENST00000542018 KIF1BO60333 1816 aa28.86■■■□□ 2.21
RAP1B-227ENST00000542018 PPARGC1BQ86YN6 1023 aaKnown RBP28.86■■■□□ 2.21
RAP1B-227ENST00000542018 ROBO2Q9HCK4 1378 aa28.85■■■□□ 2.21
RAP1B-227ENST00000542018 PTCH1Q13635 1447 aa28.84■■■□□ 2.21
RAP1B-227ENST00000542018 ORAI2Q96SN7 254 aa28.83■■■□□ 2.21
RAP1B-227ENST00000542018 SOS2Q07890 1332 aaPredicted RBP28.83■■■□□ 2.21
RAP1B-227ENST00000542018 ADAMTS2O95450 1211 aa28.82■■■□□ 2.2
RAP1B-227ENST00000542018 PRAG1Q86YV5 1406 aa28.8■■■□□ 2.2
RAP1B-227ENST00000542018 NGLY1Q96IV0 654 aa28.8■■■□□ 2.2
RAP1B-227ENST00000542018 NAIPQ13075 1403 aa28.77■■■□□ 2.2
RAP1B-227ENST00000542018 COL22A1Q8NFW1 1626 aaPredicted RBP28.74■■■□□ 2.19
RAP1B-227ENST00000542018 EP400Q96L91 3159 aa28.74■■■□□ 2.19
RAP1B-227ENST00000542018 VGFO15240 615 aaPredicted RBP28.72■■■□□ 2.19
RAP1B-227ENST00000542018 FNBP4Q8N3X1 1017 aaPredicted RBP28.72■■■□□ 2.19
RAP1B-227ENST00000542018 USP21Q9UK80 565 aa28.72■■■□□ 2.19
RAP1B-227ENST00000542018 PPLO60437 1756 aa28.71■■■□□ 2.19
RAP1B-227ENST00000542018 ATRNO75882 1429 aa28.69■■■□□ 2.18
RAP1B-227ENST00000542018 RRBP1Q9P2E9 1410 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms