RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 AK7Q96M32 723 aa13.1□□□□□ -0.31
GABRB3-204ENST00000541819 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
GABRB3-204ENST00000541819 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
GABRB3-204ENST00000541819 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
GABRB3-204ENST00000541819 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-204ENST00000541819 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-204ENST00000541819 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
GABRB3-204ENST00000541819 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-204ENST00000541819 HOMER1Q86YM7 354 aa13.08□□□□□ -0.31
GABRB3-204ENST00000541819 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
GABRB3-204ENST00000541819 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-204ENST00000541819 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-204ENST00000541819 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
GABRB3-204ENST00000541819 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
GABRB3-204ENST00000541819 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
GABRB3-204ENST00000541819 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
GABRB3-204ENST00000541819 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
GABRB3-204ENST00000541819 REC8O95072 547 aa13.07□□□□□ -0.32
GABRB3-204ENST00000541819 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
GABRB3-204ENST00000541819 SAFBQ15424 915 aaKnown RBP eCLIP13.07□□□□□ -0.32
GABRB3-204ENST00000541819 EPS15P42566 896 aa13.07□□□□□ -0.32
GABRB3-204ENST00000541819 ACBD3Q9H3P7 528 aa13.06□□□□□ -0.32
GABRB3-204ENST00000541819 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-204ENST00000541819 HSP90AA2PQ14568 343 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-204ENST00000541819 HSP90AB2PQ58FF8 381 aa13.06□□□□□ -0.32
GABRB3-204ENST00000541819 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
GABRB3-204ENST00000541819 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-204ENST00000541819 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
GABRB3-204ENST00000541819 ROCK1Q13464 1354 aa13.06□□□□□ -0.32
GABRB3-204ENST00000541819 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
GABRB3-204ENST00000541819 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
GABRB3-204ENST00000541819 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
GABRB3-204ENST00000541819 BRMS1Q9HCU9 246 aa13.05□□□□□ -0.32
GABRB3-204ENST00000541819 CCDC173Q0VFZ6 552 aa13.05□□□□□ -0.32
GABRB3-204ENST00000541819 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-204ENST00000541819 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
GABRB3-204ENST00000541819 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
GABRB3-204ENST00000541819 EVC2Q86UK5 1308 aa13.04□□□□□ -0.32
GABRB3-204ENST00000541819 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
GABRB3-204ENST00000541819 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABRB3-204ENST00000541819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-204ENST00000541819 SASS6Q6UVJ0 657 aa13.03□□□□□ -0.32
GABRB3-204ENST00000541819 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
GABRB3-204ENST00000541819 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
GABRB3-204ENST00000541819 E9PSI1 815 aa13.03□□□□□ -0.32
GABRB3-204ENST00000541819 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
GABRB3-204ENST00000541819 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-204ENST00000541819 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.32
GABRB3-204ENST00000541819 OFD1O75665 1012 aa13.02□□□□□ -0.33
GABRB3-204ENST00000541819 ARGLU1Q9NWB6 273 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-204ENST00000541819 MYO6Q9UM54 1294 aa13.02□□□□□ -0.33
GABRB3-204ENST00000541819 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
GABRB3-204ENST00000541819 XBP1P17861 261 aa13.01□□□□□ -0.33
GABRB3-204ENST00000541819 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
GABRB3-204ENST00000541819 PSME1Q06323 249 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 CCDC27Q2M243 656 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
GABRB3-204ENST00000541819 FYB1O15117 783 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 DCTN1Q14203 1278 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 OLFM4Q6UX06 510 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 MNS1Q8NEH6 495 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
GABRB3-204ENST00000541819 IKQ13123 557 aaPredicted RBP13□□□□□ -0.33
GABRB3-204ENST00000541819 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 ERC2O15083 957 aa13□□□□□ -0.33
GABRB3-204ENST00000541819 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
GABRB3-204ENST00000541819 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
GABRB3-204ENST00000541819 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-204ENST00000541819 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
GABRB3-204ENST00000541819 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
GABRB3-204ENST00000541819 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
GABRB3-204ENST00000541819 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
GABRB3-204ENST00000541819 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
GABRB3-204ENST00000541819 NACADO15069 1562 aa12.99□□□□□ -0.33
GABRB3-204ENST00000541819 FOSBP53539 338 aa12.98□□□□□ -0.33
GABRB3-204ENST00000541819 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
GABRB3-204ENST00000541819 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
GABRB3-204ENST00000541819 CCDC18Q5T9S5 1454 aa12.98□□□□□ -0.33
GABRB3-204ENST00000541819 PANK3Q9H999 370 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-204ENST00000541819 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
GABRB3-204ENST00000541819 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
GABRB3-204ENST00000541819 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
GABRB3-204ENST00000541819 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
GABRB3-204ENST00000541819 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
GABRB3-204ENST00000541819 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
GABRB3-204ENST00000541819 NEUROD6Q96NK8 337 aa12.95□□□□□ -0.34
GABRB3-204ENST00000541819 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
GABRB3-204ENST00000541819 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
GABRB3-204ENST00000541819 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-204ENST00000541819 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-204ENST00000541819 SYCP1Q15431 976 aa12.95□□□□□ -0.34
GABRB3-204ENST00000541819 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
GABRB3-204ENST00000541819 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms