RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MAP2K5Q13163 448 aa9.32□□□□□ -0.92
SNHG1-217ENST00000541578 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
SNHG1-217ENST00000541578 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-217ENST00000541578 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
SNHG1-217ENST00000541578 IRF6O14896 467 aa9.3□□□□□ -0.92
SNHG1-217ENST00000541578 ZC3H15Q8WU90 426 aaKnown RBP9.3□□□□□ -0.92
SNHG1-217ENST00000541578 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
SNHG1-217ENST00000541578 ZMYND10O75800 440 aa9.27□□□□□ -0.93
SNHG1-217ENST00000541578 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
SNHG1-217ENST00000541578 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
SNHG1-217ENST00000541578 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
SNHG1-217ENST00000541578 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
SNHG1-217ENST00000541578 NLRP7Q8WX94 980 aa9.25□□□□□ -0.93
SNHG1-217ENST00000541578 APLP1P51693 650 aa9.24□□□□□ -0.93
SNHG1-217ENST00000541578 CCDC102AQ96A19 550 aa9.24□□□□□ -0.93
SNHG1-217ENST00000541578 PRR14Q9BWN1 585 aa9.24□□□□□ -0.93
SNHG1-217ENST00000541578 ITGBL1O95965 494 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-217ENST00000541578 SLC10A3P09131 477 aa9.22□□□□□ -0.93
SNHG1-217ENST00000541578 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
SNHG1-217ENST00000541578 KCNC4Q03721 635 aa9.21□□□□□ -0.94
SNHG1-217ENST00000541578 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.94
SNHG1-217ENST00000541578 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
SNHG1-217ENST00000541578 CFHP08603 1231 aa9.2□□□□□ -0.94
SNHG1-217ENST00000541578 TJAP1Q5JTD0 557 aa9.2□□□□□ -0.94
SNHG1-217ENST00000541578 SULF1Q8IWU6 871 aa9.2□□□□□ -0.94
SNHG1-217ENST00000541578 RDH13Q8NBN7 331 aa9.2□□□□□ -0.94
SNHG1-217ENST00000541578 MDM2Q00987 491 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-217ENST00000541578 MTRQ99707 1265 aa9.19□□□□□ -0.94
SNHG1-217ENST00000541578 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
SNHG1-217ENST00000541578 PCDHB3Q9Y5E6 796 aa9.18□□□□□ -0.94
SNHG1-217ENST00000541578 ACTN4O43707 911 aaKnown RBP9.17□□□□□ -0.94
SNHG1-217ENST00000541578 CLCN1P35523 988 aa9.16□□□□□ -0.94
SNHG1-217ENST00000541578 COPS2P61201 443 aa9.15□□□□□ -0.94
SNHG1-217ENST00000541578 AK7Q96M32 723 aa9.15□□□□□ -0.94
SNHG1-217ENST00000541578 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
SNHG1-217ENST00000541578 GPCPD1Q9NPB8 672 aa9.14□□□□□ -0.95
SNHG1-217ENST00000541578 GCGRP47871 477 aa9.13□□□□□ -0.95
SNHG1-217ENST00000541578 BLOC1S3Q6QNY0 202 aa9.13□□□□□ -0.95
SNHG1-217ENST00000541578 A0A0G2JS52 829 aa9.12□□□□□ -0.95
SNHG1-217ENST00000541578 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
SNHG1-217ENST00000541578 TRIM66O15016 1216 aa9.11□□□□□ -0.95
SNHG1-217ENST00000541578 ZPR1O75312 459 aa9.11□□□□□ -0.95
SNHG1-217ENST00000541578 TTLL12Q14166 644 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-217ENST00000541578 AMHR2Q16671 573 aa9.11□□□□□ -0.95
SNHG1-217ENST00000541578 NR1I2O75469 434 aa9.1□□□□□ -0.95
SNHG1-217ENST00000541578 CD46P15529 392 aa9.1□□□□□ -0.95
SNHG1-217ENST00000541578 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-217ENST00000541578 ATP6V1AP38606 617 aa9.09□□□□□ -0.95
SNHG1-217ENST00000541578 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
SNHG1-217ENST00000541578 SLC24A3Q9HC58 644 aa9.09□□□□□ -0.95
SNHG1-217ENST00000541578 FUT2Q10981 343 aa9.08□□□□□ -0.96
SNHG1-217ENST00000541578 PUS10Q3MIT2 529 aaKnown RBP9.08□□□□□ -0.96
SNHG1-217ENST00000541578 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
SNHG1-217ENST00000541578 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-217ENST00000541578 GRIPAP1Q4V328 841 aa9.07□□□□□ -0.96
SNHG1-217ENST00000541578 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
SNHG1-217ENST00000541578 KDM4AO75164 1064 aa9.06□□□□□ -0.96
SNHG1-217ENST00000541578 MORN1Q5T089 497 aa9.06□□□□□ -0.96
SNHG1-217ENST00000541578 GIGYF2Q6Y7W6 1299 aaKnown RBP9.05□□□□□ -0.96
SNHG1-217ENST00000541578 RGS20O76081 388 aa9.04□□□□□ -0.96
SNHG1-217ENST00000541578 USP46P62068 366 aa9.04□□□□□ -0.96
SNHG1-217ENST00000541578 GGCXP38435 758 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 PDE4DQ08499 809 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 PARP9Q8IXQ6 854 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 SLC27A5Q9Y2P5 690 aa9.03□□□□□ -0.96
SNHG1-217ENST00000541578 TLL1O43897 1013 aa9.02□□□□□ -0.97
SNHG1-217ENST00000541578 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.02□□□□□ -0.97
SNHG1-217ENST00000541578 ADH1BP00325 375 aa9.01□□□□□ -0.97
SNHG1-217ENST00000541578 SPSB2Q99619 263 aa9□□□□□ -0.97
SNHG1-217ENST00000541578 FMNL1O95466 1100 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-217ENST00000541578 Q3C1V9 767 aa8.99□□□□□ -0.97
SNHG1-217ENST00000541578 BEGAINQ9BUH8 593 aa8.99□□□□□ -0.97
SNHG1-217ENST00000541578 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-217ENST00000541578 HOXA2O43364 376 aa8.98□□□□□ -0.97
SNHG1-217ENST00000541578 BRICD5Q6PL45 260 aa8.98□□□□□ -0.97
SNHG1-217ENST00000541578 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
SNHG1-217ENST00000541578 MS4A1P11836 297 aa8.97□□□□□ -0.97
SNHG1-217ENST00000541578 SLC6A16Q9GZN6 736 aa8.97□□□□□ -0.97
SNHG1-217ENST00000541578 S1PR4O95977 384 aa8.96□□□□□ -0.98
SNHG1-217ENST00000541578 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.98
SNHG1-217ENST00000541578 RNF223E7ERA6 249 aa8.95□□□□□ -0.98
SNHG1-217ENST00000541578 DIXDC1Q155Q3 683 aa8.95□□□□□ -0.98
SNHG1-217ENST00000541578 HLA-CQ95604 372 aa8.95□□□□□ -0.98
SNHG1-217ENST00000541578 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-217ENST00000541578 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
SNHG1-217ENST00000541578 RNF19BQ6ZMZ0 732 aa8.93□□□□□ -0.98
SNHG1-217ENST00000541578 TBC1D2Q9BYX2 928 aa8.93□□□□□ -0.98
SNHG1-217ENST00000541578 PRKD2Q9BZL6 878 aa8.93□□□□□ -0.98
SNHG1-217ENST00000541578 PPEF1O14829 653 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-217ENST00000541578 FDX1P10109 184 aa8.92□□□□□ -0.98
SNHG1-217ENST00000541578 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
SNHG1-217ENST00000541578 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
SNHG1-217ENST00000541578 MOXD2PA6NHM9 499 aa8.91□□□□□ -0.98
SNHG1-217ENST00000541578 NDUFV2P19404 249 aa8.91□□□□□ -0.98
SNHG1-217ENST00000541578 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
SNHG1-217ENST00000541578 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
SNHG1-217ENST00000541578 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-217ENST00000541578 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms