RNA–Protein interactions for RNA: ENST00000541331.5

CACNA2D4-212, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 498 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-212ENST00000541331 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
CACNA2D4-212ENST00000541331 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
CACNA2D4-212ENST00000541331 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
CACNA2D4-212ENST00000541331 SLC26A8Q96RN1 970 aa25.79■■□□□ 1.72
CACNA2D4-212ENST00000541331 SPHKAPQ2M3C7 1700 aa25.79■■□□□ 1.72
CACNA2D4-212ENST00000541331 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
CACNA2D4-212ENST00000541331 NAIPQ13075 1403 aa25.75■■□□□ 1.71
CACNA2D4-212ENST00000541331 HSPA1LP34931 641 aa25.75■■□□□ 1.71
CACNA2D4-212ENST00000541331 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
CACNA2D4-212ENST00000541331 PLEKHG1Q9ULL1 1385 aa25.74■■□□□ 1.71
CACNA2D4-212ENST00000541331 HDGFP51858 240 aaKnown RBP25.72■■□□□ 1.71
CACNA2D4-212ENST00000541331 NKTRP30414 1462 aaKnown RBP25.72■■□□□ 1.71
CACNA2D4-212ENST00000541331 KCNA6P17658 529 aa25.7■■□□□ 1.7
CACNA2D4-212ENST00000541331 HFM1A2PYH4 1435 aa25.7■■□□□ 1.7
CACNA2D4-212ENST00000541331 TMEM94Q12767 1356 aa25.69■■□□□ 1.7
CACNA2D4-212ENST00000541331 NUTM2DQ5VT03 806 aaPredicted RBP25.69■■□□□ 1.7
CACNA2D4-212ENST00000541331 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.68■■□□□ 1.7
CACNA2D4-212ENST00000541331 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
CACNA2D4-212ENST00000541331 TRPM2O94759 1503 aa25.65■■□□□ 1.7
CACNA2D4-212ENST00000541331 PROSER2Q86WR7 435 aaPredicted RBP25.65■■□□□ 1.7
CACNA2D4-212ENST00000541331 CLTCL1P53675 1640 aa25.65■■□□□ 1.7
CACNA2D4-212ENST00000541331 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
CACNA2D4-212ENST00000541331 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
CACNA2D4-212ENST00000541331 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
CACNA2D4-212ENST00000541331 MED1Q15648 1581 aaPredicted RBP25.63■■□□□ 1.69
CACNA2D4-212ENST00000541331 ZNF326Q5BKZ1 582 aaKnown RBP25.6■■□□□ 1.69
CACNA2D4-212ENST00000541331 ADAMTS13Q76LX8 1427 aa25.6■■□□□ 1.69
CACNA2D4-212ENST00000541331 MSH6P52701 1360 aa25.57■■□□□ 1.68
CACNA2D4-212ENST00000541331 ILDR2Q71H61 639 aa25.57■■□□□ 1.68
CACNA2D4-212ENST00000541331 KIF1BO60333 1816 aa25.57■■□□□ 1.68
CACNA2D4-212ENST00000541331 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
CACNA2D4-212ENST00000541331 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
CACNA2D4-212ENST00000541331 NRXN3Q9Y4C0 1643 aa25.54■■□□□ 1.68
CACNA2D4-212ENST00000541331 SETBP1Q9Y6X0 1596 aa25.53■■□□□ 1.68
CACNA2D4-212ENST00000541331 NEXMIFQ5QGS0 1516 aa25.53■■□□□ 1.68
CACNA2D4-212ENST00000541331 C14orf37Q86TY3 774 aa25.52■■□□□ 1.68
CACNA2D4-212ENST00000541331 SLC4A1APQ9BWU0 796 aaKnown RBP25.52■■□□□ 1.68
CACNA2D4-212ENST00000541331 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
CACNA2D4-212ENST00000541331 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
CACNA2D4-212ENST00000541331 XRN1Q8IZH2 1706 aaKnown RBP25.46■■□□□ 1.67
CACNA2D4-212ENST00000541331 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
CACNA2D4-212ENST00000541331 PTPRUQ92729 1446 aa25.45■■□□□ 1.66
CACNA2D4-212ENST00000541331 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
CACNA2D4-212ENST00000541331 NCOA3Q9Y6Q9 1424 aa25.43■■□□□ 1.66
CACNA2D4-212ENST00000541331 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.43■■□□□ 1.66
CACNA2D4-212ENST00000541331 FOXD1Q16676 465 aa25.41■■□□□ 1.66
CACNA2D4-212ENST00000541331 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
CACNA2D4-212ENST00000541331 SLAIN2Q9P270 581 aa25.4■■□□□ 1.66
CACNA2D4-212ENST00000541331 METP08581 1390 aa25.4■■□□□ 1.66
CACNA2D4-212ENST00000541331 PPLO60437 1756 aa25.38■■□□□ 1.65
CACNA2D4-212ENST00000541331 CCDC144AA2RUR9 1427 aa25.37■■□□□ 1.65
CACNA2D4-212ENST00000541331 SOCS7O14512 581 aa25.37■■□□□ 1.65
CACNA2D4-212ENST00000541331 ATF3P18847 181 aa25.37■■□□□ 1.65
CACNA2D4-212ENST00000541331 CADPS2Q86UW7 1296 aa25.35■■□□□ 1.65
CACNA2D4-212ENST00000541331 C19orf44Q9H6X5 657 aa25.34■■□□□ 1.65
CACNA2D4-212ENST00000541331 SETD1AO15047 1707 aaKnown RBP25.33■■□□□ 1.65
CACNA2D4-212ENST00000541331 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
CACNA2D4-212ENST00000541331 MPHOSPH9Q99550 1183 aa25.32■■□□□ 1.64
CACNA2D4-212ENST00000541331 DCCP43146 1447 aa25.31■■□□□ 1.64
CACNA2D4-212ENST00000541331 SETD5Q9C0A6 1442 aa25.31■■□□□ 1.64
CACNA2D4-212ENST00000541331 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
CACNA2D4-212ENST00000541331 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
CACNA2D4-212ENST00000541331 NALCNQ8IZF0 1738 aa25.3■■□□□ 1.64
CACNA2D4-212ENST00000541331 ADGRL3Q9HAR2 1447 aa25.28■■□□□ 1.64
CACNA2D4-212ENST00000541331 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
CACNA2D4-212ENST00000541331 PTCH1Q13635 1447 aa25.26■■□□□ 1.63
CACNA2D4-212ENST00000541331 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
CACNA2D4-212ENST00000541331 ASXL1Q8IXJ9 1541 aa25.24■■□□□ 1.63
CACNA2D4-212ENST00000541331 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
CACNA2D4-212ENST00000541331 RAB3GAP2Q9H2M9 1393 aa25.24■■□□□ 1.63
CACNA2D4-212ENST00000541331 JCADQ9P266 1359 aa25.24■■□□□ 1.63
CACNA2D4-212ENST00000541331 ACIN1Q9UKV3 1341 aaKnown RBP25.23■■□□□ 1.63
CACNA2D4-212ENST00000541331 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
CACNA2D4-212ENST00000541331 MST1RQ04912 1400 aa25.22■■□□□ 1.63
CACNA2D4-212ENST00000541331 BRINP3Q76B58 766 aa25.2■■□□□ 1.62
CACNA2D4-212ENST00000541331 ROBO2Q9HCK4 1378 aa25.19■■□□□ 1.62
CACNA2D4-212ENST00000541331 ANKRD30BQ9BXX2 1392 aa25.18■■□□□ 1.62
CACNA2D4-212ENST00000541331 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
CACNA2D4-212ENST00000541331 SHPRHQ149N8 1683 aa25.17■■□□□ 1.62
CACNA2D4-212ENST00000541331 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
CACNA2D4-212ENST00000541331 NHSL1Q5SYE7 1610 aa25.16■■□□□ 1.62
CACNA2D4-212ENST00000541331 PIK3C2GO75747 1445 aa25.12■■□□□ 1.61
CACNA2D4-212ENST00000541331 RGS17Q9UGC6 210 aaPredicted RBP25.12■■□□□ 1.61
CACNA2D4-212ENST00000541331 LRP6O75581 1613 aa25.12■■□□□ 1.61
CACNA2D4-212ENST00000541331 SPATA31A6Q5VVP1 1343 aa25.11■■□□□ 1.61
CACNA2D4-212ENST00000541331 C1orf167Q5SNV9 1468 aa25.1■■□□□ 1.61
CACNA2D4-212ENST00000541331 MEX3CQ5U5Q3 659 aaKnown RBP25.1■■□□□ 1.61
CACNA2D4-212ENST00000541331 KNDC1Q76NI1 1749 aa25.09■■□□□ 1.61
CACNA2D4-212ENST00000541331 STK26Q9P289 416 aa25.09■■□□□ 1.61
CACNA2D4-212ENST00000541331 CDC42BPGQ6DT37 1551 aa25.09■■□□□ 1.61
CACNA2D4-212ENST00000541331 MYOM2P54296 1465 aa25.08■■□□□ 1.6
CACNA2D4-212ENST00000541331 LAMC1P11047 1609 aa25.08■■□□□ 1.6
CACNA2D4-212ENST00000541331 LRPPRCP42704 1394 aaKnown RBP25.05■■□□□ 1.6
CACNA2D4-212ENST00000541331 TECPR2O15040 1411 aa25.05■■□□□ 1.6
CACNA2D4-212ENST00000541331 DDX17Q92841 729 aaKnown RBP25.05■■□□□ 1.6
CACNA2D4-212ENST00000541331 TMEM132EQ6IEE7 984 aa25.03■■□□□ 1.6
CACNA2D4-212ENST00000541331 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-212ENST00000541331 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-212ENST00000541331 POTEAQ6S8J7 498 aa25.02■■□□□ 1.6
CACNA2D4-212ENST00000541331 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms