RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
UBC-209ENST00000541272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.546e-16■□□□□ 9.8
UBC-209ENST00000541272 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
UBC-209ENST00000541272 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
UBC-209ENST00000541272 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
UBC-209ENST00000541272 TBX22Q9Y458 520 aa18.42■□□□□ 0.54
UBC-209ENST00000541272 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
UBC-209ENST00000541272 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
UBC-209ENST00000541272 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
UBC-209ENST00000541272 ADGRL2O95490 1459 aa18.39■□□□□ 0.54
UBC-209ENST00000541272 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
UBC-209ENST00000541272 APLP2Q06481 763 aa18.38■□□□□ 0.53
UBC-209ENST00000541272 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
UBC-209ENST00000541272 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
UBC-209ENST00000541272 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
UBC-209ENST00000541272 DIP2AQ14689 1571 aa18.35■□□□□ 0.53
UBC-209ENST00000541272 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
UBC-209ENST00000541272 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
UBC-209ENST00000541272 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.53
UBC-209ENST00000541272 BCANQ96GW7 911 aa18.33■□□□□ 0.52
UBC-209ENST00000541272 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
UBC-209ENST00000541272 DCCP43146 1447 aa18.31■□□□□ 0.52
UBC-209ENST00000541272 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
UBC-209ENST00000541272 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
UBC-209ENST00000541272 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
UBC-209ENST00000541272 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
UBC-209ENST00000541272 ATF3P18847 181 aa18.29■□□□□ 0.52
UBC-209ENST00000541272 UPF1Q92900 1129 aaKnown RBP eCLIP18.29■□□□□ 0.52
UBC-209ENST00000541272 RBM33Q96EV2 1170 aaKnown RBP18.28■□□□□ 0.52
UBC-209ENST00000541272 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
UBC-209ENST00000541272 RXRBP28702 533 aa18.26■□□□□ 0.51
UBC-209ENST00000541272 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
UBC-209ENST00000541272 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
UBC-209ENST00000541272 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
UBC-209ENST00000541272 LRP6O75581 1613 aa18.24■□□□□ 0.51
UBC-209ENST00000541272 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
UBC-209ENST00000541272 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.23■□□□□ 0.51
UBC-209ENST00000541272 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
UBC-209ENST00000541272 TRPM2O94759 1503 aa18.23■□□□□ 0.51
UBC-209ENST00000541272 UNC13BO14795 1591 aa18.21■□□□□ 0.51
UBC-209ENST00000541272 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
UBC-209ENST00000541272 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
UBC-209ENST00000541272 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
UBC-209ENST00000541272 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
UBC-209ENST00000541272 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
UBC-209ENST00000541272 AMOTL2Q9Y2J4 779 aa18.19■□□□□ 0.5
UBC-209ENST00000541272 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
UBC-209ENST00000541272 FOXD1Q16676 465 aa18.16■□□□□ 0.5
UBC-209ENST00000541272 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
UBC-209ENST00000541272 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
UBC-209ENST00000541272 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
UBC-209ENST00000541272 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
UBC-209ENST00000541272 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
UBC-209ENST00000541272 E9PCH4 1651 aa18.13■□□□□ 0.49
UBC-209ENST00000541272 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
UBC-209ENST00000541272 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
UBC-209ENST00000541272 NGLY1Q96IV0 654 aa18.12■□□□□ 0.49
UBC-209ENST00000541272 MST1RQ04912 1400 aa18.12■□□□□ 0.49
UBC-209ENST00000541272 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
UBC-209ENST00000541272 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
UBC-209ENST00000541272 AFF2P51816 1311 aa18.11■□□□□ 0.49
UBC-209ENST00000541272 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
UBC-209ENST00000541272 QTRT2Q9H974 415 aaKnown RBP18.08■□□□□ 0.48
UBC-209ENST00000541272 ADGRL3Q9HAR2 1447 aa18.07■□□□□ 0.48
UBC-209ENST00000541272 LAMC1P11047 1609 aa18.07■□□□□ 0.48
UBC-209ENST00000541272 NUP155O75694 1391 aa18.06■□□□□ 0.48
UBC-209ENST00000541272 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
UBC-209ENST00000541272 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
UBC-209ENST00000541272 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
UBC-209ENST00000541272 PNPLA6Q8IY17 1366 aa18.05■□□□□ 0.48
UBC-209ENST00000541272 CCDC125Q86Z20 511 aa18.05■□□□□ 0.48
UBC-209ENST00000541272 PRAG1Q86YV5 1406 aa18.05■□□□□ 0.48
UBC-209ENST00000541272 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
UBC-209ENST00000541272 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
UBC-209ENST00000541272 NUTM2DQ5VT03 806 aaPredicted RBP18.03■□□□□ 0.48
UBC-209ENST00000541272 RGS12O14924 1447 aa18.03■□□□□ 0.48
UBC-209ENST00000541272 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
UBC-209ENST00000541272 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
UBC-209ENST00000541272 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
UBC-209ENST00000541272 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
UBC-209ENST00000541272 METP08581 1390 aa18.01■□□□□ 0.47
UBC-209ENST00000541272 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
UBC-209ENST00000541272 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
UBC-209ENST00000541272 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
UBC-209ENST00000541272 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
UBC-209ENST00000541272 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
UBC-209ENST00000541272 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
UBC-209ENST00000541272 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
UBC-209ENST00000541272 USP21Q9UK80 565 aa17.95■□□□□ 0.46
UBC-209ENST00000541272 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
UBC-209ENST00000541272 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
UBC-209ENST00000541272 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
UBC-209ENST00000541272 COL22A1Q8NFW1 1626 aaPredicted RBP17.94■□□□□ 0.46
UBC-209ENST00000541272 ATRNO75882 1429 aa17.92■□□□□ 0.46
UBC-209ENST00000541272 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
UBC-209ENST00000541272 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
UBC-209ENST00000541272 SRCAPQ6ZRS2 3230 aa17.9■□□□□ 0.46
UBC-209ENST00000541272 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
UBC-209ENST00000541272 MYOM2P54296 1465 aa17.88■□□□□ 0.45
UBC-209ENST00000541272 KIF1BO60333 1816 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms