RNA–Protein interactions for RNA: ENST00000541213.5

POLE-216, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 1,675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-216	ENST00000541213	HDGF	P51858	240 aa	Known RBP	31.56	■■■□□ 2.64
POLE-216	ENST00000541213	IFT172	Q9UG01	1749 aa		31.55	■■■□□ 2.64
POLE-216	ENST00000541213	ROCK2	O75116	1388 aa	Known RBP	31.55	■■■□□ 2.64
POLE-216	ENST00000541213	NRXN1	Q9ULB1	1477 aa		31.54	■■■□□ 2.64
POLE-216	ENST00000541213	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.54	■■■□□ 2.64
POLE-216	ENST00000541213	CARD11	Q9BXL7	1154 aa		31.54	■■■□□ 2.64
POLE-216	ENST00000541213	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.53	■■■□□ 2.64
POLE-216	ENST00000541213	PPL	O60437	1756 aa		31.53	■■■□□ 2.64
POLE-216	ENST00000541213	KDM5A	P29375	1690 aa	Known RBP	31.53	■■■□□ 2.64
POLE-216	ENST00000541213	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.51	■■■□□ 2.63
POLE-216	ENST00000541213	RIMS2	Q9UQ26	1411 aa		31.5	■■■□□ 2.63
POLE-216	ENST00000541213	NBPF1	Q3BBV0	1214 aa		31.5	■■■□□ 2.63
POLE-216	ENST00000541213	TRPM1	Q7Z4N2	1603 aa		31.49	■■■□□ 2.63
POLE-216	ENST00000541213	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.49	■■■□□ 2.63
POLE-216	ENST00000541213	GPRASP1	Q5JY77	1395 aa		31.48	■■■□□ 2.63
POLE-216	ENST00000541213	PIK3C2G	O75747	1445 aa		31.48	■■■□□ 2.63
POLE-216	ENST00000541213	MYO5B	Q9ULV0	1848 aa		31.48	■■■□□ 2.63
POLE-216	ENST00000541213	TMEM2	Q9UHN6	1383 aa		31.47	■■■□□ 2.63
POLE-216	ENST00000541213	UBR1	Q8IWV7	1749 aa		31.46	■■■□□ 2.63
POLE-216	ENST00000541213	CFAP70	Q5T0N1	1121 aa		31.45	■■■□□ 2.63
POLE-216	ENST00000541213	C14orf93	Q9H972	538 aa	Known RBP	31.45	■■■□□ 2.63
POLE-216	ENST00000541213	HSPA5	P11021	654 aa	Known RBP	31.44	■■■□□ 2.62
POLE-216	ENST00000541213	MYO3A	Q8NEV4	1616 aa		31.44	■■■□□ 2.62
POLE-216	ENST00000541213	KDM4F	A0A1W2PPD8	638 aa		31.43	■■■□□ 2.62
POLE-216	ENST00000541213	SETD1B	Q9UPS6	1966 aa	Known RBP	31.41	■■■□□ 2.62
POLE-216	ENST00000541213	USP47	Q96K76	1375 aa		31.41	■■■□□ 2.62
POLE-216	ENST00000541213	KIAA1210	Q9ULL0	1709 aa		31.4	■■■□□ 2.62
POLE-216	ENST00000541213	EID1	Q9Y6B2	187 aa		31.39	■■■□□ 2.62
POLE-216	ENST00000541213	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.39	■■■□□ 2.62
POLE-216	ENST00000541213	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.38	■■■□□ 2.61
POLE-216	ENST00000541213	LAMC1	P11047	1609 aa		31.36	■■■□□ 2.61
POLE-216	ENST00000541213	TXNDC2	Q86VQ3	553 aa		31.35	■■■□□ 2.61
POLE-216	ENST00000541213	SLIT1	O75093	1534 aa		31.35	■■■□□ 2.61
POLE-216	ENST00000541213	ARHGAP23	Q9P227	1491 aa		31.35	■■■□□ 2.61
POLE-216	ENST00000541213	LTK	P29376	864 aa		31.32	■■■□□ 2.6
POLE-216	ENST00000541213	SETBP1	Q9Y6X0	1596 aa		31.31	■■■□□ 2.6
POLE-216	ENST00000541213	SCAF11	Q99590	1463 aa	Known RBP	31.3	■■■□□ 2.6
POLE-216	ENST00000541213	ZNF142	P52746	1687 aa	Predicted RBP	31.29	■■■□□ 2.6
POLE-216	ENST00000541213	ST20-MTHFS	A0A0A6YYL1	179 aa		31.29	■■■□□ 2.6
POLE-216	ENST00000541213	BCAN	Q96GW7	911 aa		31.27	■■■□□ 2.6
POLE-216	ENST00000541213	PLEKHG1	Q9ULL1	1385 aa		31.27	■■■□□ 2.6
POLE-216	ENST00000541213	TMEM132E	Q6IEE7	984 aa		31.26	■■■□□ 2.6
POLE-216	ENST00000541213	SENP3	Q9H4L4	574 aa	Predicted RBP	31.25	■■■□□ 2.59
POLE-216	ENST00000541213	EIF3A	Q14152	1382 aa	Known RBP	31.25	■■■□□ 2.59
POLE-216	ENST00000541213	ANKLE2	Q86XL3	938 aa		31.25	■■■□□ 2.59
POLE-216	ENST00000541213	ALK	Q9UM73	1620 aa		31.24	■■■□□ 2.59
POLE-216	ENST00000541213	ADGRB1	O14514	1584 aa		31.24	■■■□□ 2.59
POLE-216	ENST00000541213	TRAK1	Q9UPV9	953 aa		31.18	■■■□□ 2.58
POLE-216	ENST00000541213	IQGAP1	P46940	1657 aa		31.17	■■■□□ 2.58
POLE-216	ENST00000541213	SLC24A1	O60721	1099 aa		31.16	■■■□□ 2.58
POLE-216	ENST00000541213	ADAMTS13	Q76LX8	1427 aa		31.14	■■■□□ 2.58
POLE-216	ENST00000541213	NRXN3	Q9Y4C0	1643 aa		31.13	■■■□□ 2.57
POLE-216	ENST00000541213	TESK2	Q96S53	571 aa		31.13	■■■□□ 2.57
POLE-216	ENST00000541213	TBX22	Q9Y458	520 aa		31.13	■■■□□ 2.57
POLE-216	ENST00000541213	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.12	■■■□□ 2.57
POLE-216	ENST00000541213	ASXL1	Q8IXJ9	1541 aa		31.12	■■■□□ 2.57
POLE-216	ENST00000541213	C11orf95	C9JLR9	678 aa	Predicted RBP	31.11	■■■□□ 2.57
POLE-216	ENST00000541213	STK26	Q9P289	416 aa		31.11	■■■□□ 2.57
POLE-216	ENST00000541213	WASHC2A	Q641Q2	1341 aa		31.1	■■■□□ 2.57
POLE-216	ENST00000541213	MET	P08581	1390 aa		31.1	■■■□□ 2.57
POLE-216	ENST00000541213	TMF1	P82094	1093 aa		31.09	■■■□□ 2.57
POLE-216	ENST00000541213	SLC26A8	Q96RN1	970 aa		31.09	■■■□□ 2.57
POLE-216	ENST00000541213	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.09	■■■□□ 2.57
POLE-216	ENST00000541213	LRPPRC	P42704	1394 aa	Known RBP	31.08	■■■□□ 2.57
POLE-216	ENST00000541213	MED14	O60244	1454 aa		31.08	■■■□□ 2.57
POLE-216	ENST00000541213	DIEXF	Q68CQ4	756 aa	Known RBP	31.08	■■■□□ 2.57
POLE-216	ENST00000541213	CCDC7	Q96M83	1385 aa		31.07	■■■□□ 2.56
POLE-216	ENST00000541213	ABCC11	Q96J66	1382 aa		31.06	■■■□□ 2.56
POLE-216	ENST00000541213	SETD1A	O15047	1707 aa	Known RBP	31.06	■■■□□ 2.56
POLE-216	ENST00000541213	KIF7	Q2M1P5	1343 aa		31.06	■■■□□ 2.56
POLE-216	ENST00000541213	DIP2A	Q14689	1571 aa		31.03	■■■□□ 2.56
POLE-216	ENST00000541213	SBNO2	Q9Y2G9	1366 aa		31.03	■■■□□ 2.56
POLE-216	ENST00000541213	DDX10	Q13206	875 aa	Known RBP	31.02	■■■□□ 2.56
POLE-216	ENST00000541213	SIRT1	Q96EB6	747 aa		31.01	■■■□□ 2.55
POLE-216	ENST00000541213	NCKAP5L	Q9HCH0	1330 aa		31.01	■■■□□ 2.55
POLE-216	ENST00000541213	CDCA8	Q53HL2	280 aa		31	■■■□□ 2.55
POLE-216	ENST00000541213	POGK	Q9P215	609 aa		31	■■■□□ 2.55
POLE-216	ENST00000541213	NPHP4	O75161	1426 aa	Predicted RBP	31	■■■□□ 2.55
POLE-216	ENST00000541213	DLC1	Q96QB1	1528 aa		30.99	■■■□□ 2.55
POLE-216	ENST00000541213	PIK3R4	Q99570	1358 aa		30.99	■■■□□ 2.55
POLE-216	ENST00000541213	LMTK3	Q96Q04	1460 aa		30.98	■■■□□ 2.55
POLE-216	ENST00000541213	PRAM1	Q96QH2	718 aa		30.98	■■■□□ 2.55
POLE-216	ENST00000541213	HSPA2	P54652	639 aa		30.97	■■■□□ 2.55
POLE-216	ENST00000541213	TECPR2	O15040	1411 aa		30.96	■■■□□ 2.55
POLE-216	ENST00000541213	POLR3GL	Q9BT43	218 aa		30.96	■■■□□ 2.55
POLE-216	ENST00000541213	DISP3	Q9P2K9	1392 aa		30.95	■■■□□ 2.55
POLE-216	ENST00000541213	ARHGEF28	Q8N1W1	1705 aa	Known RBP	30.94	■■■□□ 2.54
POLE-216	ENST00000541213	AMOTL2	Q9Y2J4	779 aa		30.93	■■■□□ 2.54
POLE-216	ENST00000541213	FAM135B	Q49AJ0	1406 aa		30.92	■■■□□ 2.54
POLE-216	ENST00000541213	POLR1A	O95602	1720 aa	Predicted RBP	30.92	■■■□□ 2.54
POLE-216	ENST00000541213	SAFB2	Q14151	953 aa	Known RBP eCLIP	30.91	■■■□□ 2.54
POLE-216	ENST00000541213	PTPRU	Q92729	1446 aa		30.91	■■■□□ 2.54
POLE-216	ENST00000541213	WAPL	Q7Z5K2	1190 aa		30.9	■■■□□ 2.54
POLE-216	ENST00000541213	EVC2	Q86UK5	1308 aa		30.88	■■■□□ 2.53
POLE-216	ENST00000541213	QRICH2	Q9H0J4	1663 aa		30.87	■■■□□ 2.53
POLE-216	ENST00000541213	KNDC1	Q76NI1	1749 aa		30.87	■■■□□ 2.53
POLE-216	ENST00000541213	CPS1	P31327	1500 aa		30.86	■■■□□ 2.53
POLE-216	ENST00000541213	PUS7	Q96PZ0	661 aa	Known RBP	30.85	■■■□□ 2.53
POLE-216	ENST00000541213	ROBO2	Q9HCK4	1378 aa		30.85	■■■□□ 2.53
POLE-216	ENST00000541213	PLEKHH1	Q9ULM0	1364 aa		30.84	■■■□□ 2.53

Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms