RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
RNF4-222ENST00000541204 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
RNF4-222ENST00000541204 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
RNF4-222ENST00000541204 CEP152O94986 1710 aa16.67■□□□□ 0.26
RNF4-222ENST00000541204 LAMC1P11047 1609 aa16.67■□□□□ 0.26
RNF4-222ENST00000541204 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
RNF4-222ENST00000541204 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
RNF4-222ENST00000541204 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
RNF4-222ENST00000541204 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
RNF4-222ENST00000541204 RNF17Q9BXT8 1623 aaKnown RBP16.65■□□□□ 0.26
RNF4-222ENST00000541204 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
RNF4-222ENST00000541204 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
RNF4-222ENST00000541204 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
RNF4-222ENST00000541204 NBR1Q14596 966 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 EXOC6Q8TAG9 804 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 STAC3Q96MF2 364 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 NPATQ14207 1427 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
RNF4-222ENST00000541204 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
RNF4-222ENST00000541204 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
RNF4-222ENST00000541204 NOS1P29475 1434 aa16.62■□□□□ 0.25
RNF4-222ENST00000541204 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
RNF4-222ENST00000541204 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
RNF4-222ENST00000541204 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
RNF4-222ENST00000541204 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
RNF4-222ENST00000541204 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
RNF4-222ENST00000541204 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
RNF4-222ENST00000541204 IQGAP1P46940 1657 aa16.59■□□□□ 0.25
RNF4-222ENST00000541204 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
RNF4-222ENST00000541204 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
RNF4-222ENST00000541204 FAM69CQ0P6D2 419 aa16.59■□□□□ 0.25
RNF4-222ENST00000541204 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
RNF4-222ENST00000541204 MROH2AA6NES4 1674 aa16.57■□□□□ 0.24
RNF4-222ENST00000541204 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
RNF4-222ENST00000541204 YEATS2Q9ULM3 1422 aa16.57■□□□□ 0.24
RNF4-222ENST00000541204 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
RNF4-222ENST00000541204 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
RNF4-222ENST00000541204 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
RNF4-222ENST00000541204 KIF1BO60333 1816 aa16.56■□□□□ 0.24
RNF4-222ENST00000541204 LMTK2Q8IWU2 1503 aa16.56■□□□□ 0.24
RNF4-222ENST00000541204 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
RNF4-222ENST00000541204 NEO1Q92859 1461 aa16.55■□□□□ 0.24
RNF4-222ENST00000541204 MYOM2P54296 1465 aa16.55■□□□□ 0.24
RNF4-222ENST00000541204 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
RNF4-222ENST00000541204 ABCC3O15438 1527 aa16.54■□□□□ 0.24
RNF4-222ENST00000541204 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
RNF4-222ENST00000541204 PLIN1O60240 522 aa16.52■□□□□ 0.24
RNF4-222ENST00000541204 CENPJQ9HC77 1338 aaPredicted RBP16.52■□□□□ 0.23
RNF4-222ENST00000541204 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
RNF4-222ENST00000541204 IDI1Q13907 227 aa16.51■□□□□ 0.23
RNF4-222ENST00000541204 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
RNF4-222ENST00000541204 ADGRB3O60242 1522 aa16.51■□□□□ 0.23
RNF4-222ENST00000541204 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
RNF4-222ENST00000541204 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
RNF4-222ENST00000541204 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
RNF4-222ENST00000541204 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
RNF4-222ENST00000541204 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
RNF4-222ENST00000541204 PDE4AP27815 886 aa16.49■□□□□ 0.23
RNF4-222ENST00000541204 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
RNF4-222ENST00000541204 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
RNF4-222ENST00000541204 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
RNF4-222ENST00000541204 STK26Q9P289 416 aa16.48■□□□□ 0.23
RNF4-222ENST00000541204 SLC12A5Q9H2X9 1139 aa16.48■□□□□ 0.23
RNF4-222ENST00000541204 SYNMO15061 1565 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 NEURL4Q96JN8 1562 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 MLECQ14165 292 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 ASXL1Q8IXJ9 1541 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
RNF4-222ENST00000541204 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.23
RNF4-222ENST00000541204 IFT172Q9UG01 1749 aa16.46■□□□□ 0.23
RNF4-222ENST00000541204 CAMSAP1Q5T5Y3 1602 aa16.46■□□□□ 0.23
RNF4-222ENST00000541204 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
RNF4-222ENST00000541204 VGFO15240 615 aaPredicted RBP16.45■□□□□ 0.22
RNF4-222ENST00000541204 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
RNF4-222ENST00000541204 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
RNF4-222ENST00000541204 KDM5AP29375 1690 aaKnown RBP16.45■□□□□ 0.22
RNF4-222ENST00000541204 MYOM1P52179 1685 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 SKAP1Q86WV1 359 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 RICTORQ6R327 1708 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
RNF4-222ENST00000541204 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 INSRP06213 1382 aa16.44■□□□□ 0.22
RNF4-222ENST00000541204 MS4A1P11836 297 aa16.43■□□□□ 0.22
RNF4-222ENST00000541204 ZMYM4Q5VZL5 1548 aa16.43■□□□□ 0.22
RNF4-222ENST00000541204 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
RNF4-222ENST00000541204 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
RNF4-222ENST00000541204 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
RNF4-222ENST00000541204 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
RNF4-222ENST00000541204 PPLO60437 1756 aa16.41■□□□□ 0.22
RNF4-222ENST00000541204 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
RNF4-222ENST00000541204 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
RNF4-222ENST00000541204 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
RNF4-222ENST00000541204 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
RNF4-222ENST00000541204 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms