RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
MDM2-226ENST00000540352 MDM2Q00987 491 aaPredicted RBP8.24□□□□□ -1.09
MDM2-226ENST00000540352 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
MDM2-226ENST00000540352 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
MDM2-226ENST00000540352 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
MDM2-226ENST00000540352 TRIM66O15016 1216 aa8.23□□□□□ -1.09
MDM2-226ENST00000540352 TMEM134Q9H6X4 195 aa8.23□□□□□ -1.09
MDM2-226ENST00000540352 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.23□□□□□ -1.09
MDM2-226ENST00000540352 BCAMP50895 628 aa8.22□□□□□ -1.09
MDM2-226ENST00000540352 CLCN1P35523 988 aa8.21□□□□□ -1.1
MDM2-226ENST00000540352 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
MDM2-226ENST00000540352 PDE4DQ08499 809 aa8.2□□□□□ -1.1
MDM2-226ENST00000540352 AMHR2Q16671 573 aa8.2□□□□□ -1.1
MDM2-226ENST00000540352 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
MDM2-226ENST00000540352 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
MDM2-226ENST00000540352 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
MDM2-226ENST00000540352 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
MDM2-226ENST00000540352 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
MDM2-226ENST00000540352 HPS5Q9UPZ3 1129 aa8.19□□□□□ -1.1
MDM2-226ENST00000540352 DDX11L8A8MPP1 907 aa8.18□□□□□ -1.1
MDM2-226ENST00000540352 PTPN5P54829 565 aa8.18□□□□□ -1.1
MDM2-226ENST00000540352 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
MDM2-226ENST00000540352 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
MDM2-226ENST00000540352 PPP4CP60510 307 aa8.17□□□□□ -1.1
MDM2-226ENST00000540352 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
MDM2-226ENST00000540352 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
MDM2-226ENST00000540352 NEUROD2Q15784 382 aa8.16□□□□□ -1.1
MDM2-226ENST00000540352 GIGYF2Q6Y7W6 1299 aaKnown RBP8.16□□□□□ -1.1
MDM2-226ENST00000540352 TSR3Q9UJK0 312 aaKnown RBP8.16□□□□□ -1.1
MDM2-226ENST00000540352 CFHP08603 1231 aa8.13□□□□□ -1.11
MDM2-226ENST00000540352 TMUB1Q9BVT8 246 aa8.13□□□□□ -1.11
MDM2-226ENST00000540352 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
MDM2-226ENST00000540352 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
MDM2-226ENST00000540352 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
MDM2-226ENST00000540352 KMT5BQ4FZB7 885 aa8.12□□□□□ -1.11
MDM2-226ENST00000540352 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
MDM2-226ENST00000540352 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
MDM2-226ENST00000540352 HCSTQ9UBK5 93 aa8.12□□□□□ -1.11
MDM2-226ENST00000540352 SLC10A3P09131 477 aa8.1□□□□□ -1.11
MDM2-226ENST00000540352 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
MDM2-226ENST00000540352 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
MDM2-226ENST00000540352 CD46P15529 392 aa8.09□□□□□ -1.11
MDM2-226ENST00000540352 MS4A1P11836 297 aa8.08□□□□□ -1.12
MDM2-226ENST00000540352 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
MDM2-226ENST00000540352 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
MDM2-226ENST00000540352 APLP1P51693 650 aa8.07□□□□□ -1.12
MDM2-226ENST00000540352 NUTM1Q86Y26 1132 aa8.07□□□□□ -1.12
MDM2-226ENST00000540352 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
MDM2-226ENST00000540352 GCGRP47871 477 aa8.05□□□□□ -1.12
MDM2-226ENST00000540352 KDM4AO75164 1064 aa8.04□□□□□ -1.12
MDM2-226ENST00000540352 PCDHB3Q9Y5E6 796 aa8.04□□□□□ -1.12
MDM2-226ENST00000540352 ACTN4O43707 911 aaKnown RBP8.03□□□□□ -1.12
MDM2-226ENST00000540352 GRIPAP1Q4V328 841 aa8.03□□□□□ -1.12
MDM2-226ENST00000540352 DDRGK1Q96HY6 314 aa8.03□□□□□ -1.12
MDM2-226ENST00000540352 COPS2P61201 443 aa8.03□□□□□ -1.12
MDM2-226ENST00000540352 FUT2Q10981 343 aa8.03□□□□□ -1.12
MDM2-226ENST00000540352 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
MDM2-226ENST00000540352 USP46P62068 366 aa8.02□□□□□ -1.13
MDM2-226ENST00000540352 PUS10Q3MIT2 529 aaKnown RBP8.02□□□□□ -1.13
MDM2-226ENST00000540352 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
MDM2-226ENST00000540352 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
MDM2-226ENST00000540352 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
MDM2-226ENST00000540352 ATP1B4Q9UN42 357 aaPredicted RBP8.01□□□□□ -1.13
MDM2-226ENST00000540352 ATP6V1AP38606 617 aa8□□□□□ -1.13
MDM2-226ENST00000540352 BLOC1S3Q6QNY0 202 aa8□□□□□ -1.13
MDM2-226ENST00000540352 SPIRE2Q8WWL2 714 aa8□□□□□ -1.13
MDM2-226ENST00000540352 MTRQ99707 1265 aa8□□□□□ -1.13
MDM2-226ENST00000540352 HOXA2O43364 376 aa7.99□□□□□ -1.13
MDM2-226ENST00000540352 NR1I2O75469 434 aa7.99□□□□□ -1.13
MDM2-226ENST00000540352 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
MDM2-226ENST00000540352 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
MDM2-226ENST00000540352 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
MDM2-226ENST00000540352 HLA-CQ95604 372 aa7.97□□□□□ -1.13
MDM2-226ENST00000540352 MOXD2PA6NHM9 499 aa7.96□□□□□ -1.14
MDM2-226ENST00000540352 NDUFV2P19404 249 aa7.96□□□□□ -1.14
MDM2-226ENST00000540352 GUCA2AQ02747 115 aa7.96□□□□□ -1.14
MDM2-226ENST00000540352 MORN1Q5T089 497 aa7.96□□□□□ -1.14
MDM2-226ENST00000540352 PLEKHG3A1L390 1219 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 FDX1P10109 184 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 KCNC4Q03721 635 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 CSPP1Q1MSJ5 1256 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 MYSM1Q5VVJ2 828 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 POLR3EQ9NVU0 708 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 SLC27A5Q9Y2P5 690 aa7.95□□□□□ -1.14
MDM2-226ENST00000540352 Q3C1V9 767 aa7.94□□□□□ -1.14
MDM2-226ENST00000540352 TJAP1Q5JTD0 557 aa7.94□□□□□ -1.14
MDM2-226ENST00000540352 RIC3Q7Z5B4 369 aa7.94□□□□□ -1.14
MDM2-226ENST00000540352 TLL1O43897 1013 aa7.93□□□□□ -1.14
MDM2-226ENST00000540352 ZPR1O75312 459 aa7.93□□□□□ -1.14
MDM2-226ENST00000540352 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
MDM2-226ENST00000540352 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
MDM2-226ENST00000540352 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
MDM2-226ENST00000540352 SCUBE3Q8IX30 993 aa7.93□□□□□ -1.14
MDM2-226ENST00000540352 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
MDM2-226ENST00000540352 C6orf229H3BNL8 230 aa7.92□□□□□ -1.14
MDM2-226ENST00000540352 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
MDM2-226ENST00000540352 ITGBL1O95965 494 aaPredicted RBP7.92□□□□□ -1.14
MDM2-226ENST00000540352 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
MDM2-226ENST00000540352 SPTLC1O15269 473 aa7.9□□□□□ -1.14
MDM2-226ENST00000540352 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms