RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
PDHA1-212ENST00000540249 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
PDHA1-212ENST00000540249 E9PCH4 1651 aa17.54■□□□□ 0.4
PDHA1-212ENST00000540249 SHANK2Q9UPX8 1470 aa17.54■□□□□ 0.4
PDHA1-212ENST00000540249 TRPM1Q7Z4N2 1603 aa17.53■□□□□ 0.4
PDHA1-212ENST00000540249 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
PDHA1-212ENST00000540249 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
PDHA1-212ENST00000540249 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
PDHA1-212ENST00000540249 TNNQ9UQP3 1299 aa17.52■□□□□ 0.39
PDHA1-212ENST00000540249 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
PDHA1-212ENST00000540249 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
PDHA1-212ENST00000540249 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
PDHA1-212ENST00000540249 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
PDHA1-212ENST00000540249 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
PDHA1-212ENST00000540249 POGKQ9P215 609 aa17.48■□□□□ 0.39
PDHA1-212ENST00000540249 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
PDHA1-212ENST00000540249 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
PDHA1-212ENST00000540249 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
PDHA1-212ENST00000540249 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
PDHA1-212ENST00000540249 ABCA8O94911 1581 aa17.46■□□□□ 0.39
PDHA1-212ENST00000540249 E9PSI1 815 aa17.45■□□□□ 0.38
PDHA1-212ENST00000540249 WDR7Q9Y4E6 1490 aa17.45■□□□□ 0.38
PDHA1-212ENST00000540249 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
PDHA1-212ENST00000540249 CARD14Q9BXL6 1004 aa17.44■□□□□ 0.38
PDHA1-212ENST00000540249 PRDM15P57071 1507 aaPredicted RBP17.44■□□□□ 0.38
PDHA1-212ENST00000540249 NUP160Q12769 1436 aa17.42■□□□□ 0.38
PDHA1-212ENST00000540249 KIF3BO15066 747 aa17.42■□□□□ 0.38
PDHA1-212ENST00000540249 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
PDHA1-212ENST00000540249 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
PDHA1-212ENST00000540249 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
PDHA1-212ENST00000540249 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
PDHA1-212ENST00000540249 NKTRP30414 1462 aaKnown RBP17.41■□□□□ 0.38
PDHA1-212ENST00000540249 RLBP1P12271 317 aa17.4■□□□□ 0.38
PDHA1-212ENST00000540249 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
PDHA1-212ENST00000540249 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
PDHA1-212ENST00000540249 SAFB2Q14151 953 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDHA1-212ENST00000540249 BECN1Q14457 450 aa17.39■□□□□ 0.37
PDHA1-212ENST00000540249 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
PDHA1-212ENST00000540249 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
PDHA1-212ENST00000540249 USP19O94966 1318 aa17.39■□□□□ 0.37
PDHA1-212ENST00000540249 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
PDHA1-212ENST00000540249 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
PDHA1-212ENST00000540249 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
PDHA1-212ENST00000540249 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
PDHA1-212ENST00000540249 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
PDHA1-212ENST00000540249 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
PDHA1-212ENST00000540249 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
PDHA1-212ENST00000540249 TRMT2AQ8IZ69 625 aaKnown RBP17.37■□□□□ 0.37
PDHA1-212ENST00000540249 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
PDHA1-212ENST00000540249 ASXL1Q8IXJ9 1541 aa17.36■□□□□ 0.37
PDHA1-212ENST00000540249 MYO5CQ9NQX4 1742 aa17.36■□□□□ 0.37
PDHA1-212ENST00000540249 TTC37Q6PGP7 1564 aa17.35■□□□□ 0.37
PDHA1-212ENST00000540249 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
PDHA1-212ENST00000540249 TRAPPC8Q9Y2L5 1435 aa17.34■□□□□ 0.37
PDHA1-212ENST00000540249 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
PDHA1-212ENST00000540249 SCAF11Q99590 1463 aaKnown RBP17.33■□□□□ 0.36
PDHA1-212ENST00000540249 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.36
PDHA1-212ENST00000540249 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
PDHA1-212ENST00000540249 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.362e-9■□□□□ 10.9
PDHA1-212ENST00000540249 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
PDHA1-212ENST00000540249 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
PDHA1-212ENST00000540249 MTHFSP49914 203 aa17.32■□□□□ 0.36
PDHA1-212ENST00000540249 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
PDHA1-212ENST00000540249 INSRP06213 1382 aa17.32■□□□□ 0.36
PDHA1-212ENST00000540249 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
PDHA1-212ENST00000540249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.364e-8■■□□□ 13.4
PDHA1-212ENST00000540249 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
PDHA1-212ENST00000540249 TBC1D2Q9BYX2 928 aa17.31■□□□□ 0.36
PDHA1-212ENST00000540249 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
PDHA1-212ENST00000540249 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
PDHA1-212ENST00000540249 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
PDHA1-212ENST00000540249 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
PDHA1-212ENST00000540249 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
PDHA1-212ENST00000540249 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.35
PDHA1-212ENST00000540249 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
PDHA1-212ENST00000540249 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
PDHA1-212ENST00000540249 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
PDHA1-212ENST00000540249 UNC13BO14795 1591 aa17.26■□□□□ 0.35
PDHA1-212ENST00000540249 SMC4Q9NTJ3 1288 aa17.25■□□□□ 0.35
PDHA1-212ENST00000540249 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
PDHA1-212ENST00000540249 UGGT1Q9NYU2 1555 aa17.25■□□□□ 0.35
PDHA1-212ENST00000540249 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
PDHA1-212ENST00000540249 GGT6Q6P531 493 aa17.25■□□□□ 0.35
PDHA1-212ENST00000540249 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
PDHA1-212ENST00000540249 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
PDHA1-212ENST00000540249 ATP10AO60312 1499 aa17.23■□□□□ 0.35
PDHA1-212ENST00000540249 STK26Q9P289 416 aa17.23■□□□□ 0.35
PDHA1-212ENST00000540249 TBC1D32Q96NH3 1257 aa17.23■□□□□ 0.35
PDHA1-212ENST00000540249 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
PDHA1-212ENST00000540249 KANK1Q14678 1352 aa17.23■□□□□ 0.35
PDHA1-212ENST00000540249 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
PDHA1-212ENST00000540249 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
PDHA1-212ENST00000540249 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
PDHA1-212ENST00000540249 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
PDHA1-212ENST00000540249 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
PDHA1-212ENST00000540249 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
PDHA1-212ENST00000540249 C22orf23Q9BZE7 217 aa17.21■□□□□ 0.35
PDHA1-212ENST00000540249 DZIP1LQ8IYY4 767 aaKnown RBP17.2■□□□□ 0.34
PDHA1-212ENST00000540249 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
PDHA1-212ENST00000540249 ERVK-7P63135 1459 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms