RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 XIRP1Q702N8 1843 aaKnown RBP29.3■■■□□ 2.28
RAP1B-221ENST00000540209 ALKQ9UM73 1620 aa29.3■■■□□ 2.28
RAP1B-221ENST00000540209 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.28
RAP1B-221ENST00000540209 TOM1O60784 492 aa29.24■■■□□ 2.27
RAP1B-221ENST00000540209 CHGAP10645 457 aaKnown RBP29.24■■■□□ 2.27
RAP1B-221ENST00000540209 NWD1Q149M9 1564 aa29.24■■■□□ 2.27
RAP1B-221ENST00000540209 SLC26A8Q96RN1 970 aa29.24■■■□□ 2.27
RAP1B-221ENST00000540209 TRPM2O94759 1503 aa29.24■■■□□ 2.27
RAP1B-221ENST00000540209 CLTCL1P53675 1640 aa29.23■■■□□ 2.27
RAP1B-221ENST00000540209 HDGFP51858 240 aaKnown RBP29.22■■■□□ 2.27
RAP1B-221ENST00000540209 PPP1R15AO75807 674 aaPredicted RBP29.19■■■□□ 2.26
RAP1B-221ENST00000540209 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.19■■■□□ 2.26
RAP1B-221ENST00000540209 CHD2O14647 1828 aaKnown RBP29.19■■■□□ 2.26
RAP1B-221ENST00000540209 KCNA6P17658 529 aa29.18■■■□□ 2.26
RAP1B-221ENST00000540209 NKTRP30414 1462 aaKnown RBP29.17■■■□□ 2.26
RAP1B-221ENST00000540209 TRIM52Q96A61 297 aa29.16■■■□□ 2.26
RAP1B-221ENST00000540209 DIP2AQ14689 1571 aa29.16■■■□□ 2.26
RAP1B-221ENST00000540209 KIF1BO60333 1816 aa29.15■■■□□ 2.26
RAP1B-221ENST00000540209 PIP4K2BP78356 416 aa29.15■■■□□ 2.26
RAP1B-221ENST00000540209 BCANQ96GW7 911 aa29.15■■■□□ 2.26
RAP1B-221ENST00000540209 ADAMTS13Q76LX8 1427 aa29.13■■■□□ 2.25
RAP1B-221ENST00000540209 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
RAP1B-221ENST00000540209 SCAF1Q9H7N4 1312 aaKnown RBP29.13■■■□□ 2.25
RAP1B-221ENST00000540209 NUTM2DQ5VT03 806 aaPredicted RBP29.12■■■□□ 2.25
RAP1B-221ENST00000540209 TMEM94Q12767 1356 aa29.11■■■□□ 2.25
RAP1B-221ENST00000540209 TBX22Q9Y458 520 aa29.1■■■□□ 2.25
RAP1B-221ENST00000540209 NRXN3Q9Y4C0 1643 aa29.09■■■□□ 2.25
RAP1B-221ENST00000540209 HSPA1LP34931 641 aa29.09■■■□□ 2.25
RAP1B-221ENST00000540209 SLC4A1APQ9BWU0 796 aaKnown RBP29.09■■■□□ 2.25
RAP1B-221ENST00000540209 NEXMIFQ5QGS0 1516 aa29.08■■■□□ 2.25
RAP1B-221ENST00000540209 SETBP1Q9Y6X0 1596 aa29.07■■■□□ 2.24
RAP1B-221ENST00000540209 PIK3R4Q99570 1358 aa29.04■■■□□ 2.24
RAP1B-221ENST00000540209 PROSER2Q86WR7 435 aaPredicted RBP29.04■■■□□ 2.24
RAP1B-221ENST00000540209 ZNF326Q5BKZ1 582 aaKnown RBP29.03■■■□□ 2.24
RAP1B-221ENST00000540209 MED1Q15648 1581 aaPredicted RBP29.03■■■□□ 2.24
RAP1B-221ENST00000540209 RBM33Q96EV2 1170 aaKnown RBP29■■■□□ 2.23
RAP1B-221ENST00000540209 SETD5Q9C0A6 1442 aa28.97■■■□□ 2.23
RAP1B-221ENST00000540209 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
RAP1B-221ENST00000540209 PPLO60437 1756 aa28.96■■■□□ 2.23
RAP1B-221ENST00000540209 PTPRUQ92729 1446 aa28.95■■■□□ 2.23
RAP1B-221ENST00000540209 FOXD1Q16676 465 aa28.95■■■□□ 2.22
RAP1B-221ENST00000540209 NCOA3Q9Y6Q9 1424 aa28.94■■■□□ 2.22
RAP1B-221ENST00000540209 MPHOSPH9Q99550 1183 aa28.94■■■□□ 2.22
RAP1B-221ENST00000540209 MSH6P52701 1360 aa28.93■■■□□ 2.22
RAP1B-221ENST00000540209 FAM135BQ49AJ0 1406 aa28.93■■■□□ 2.22
RAP1B-221ENST00000540209 ACIN1Q9UKV3 1341 aaKnown RBP28.93■■■□□ 2.22
RAP1B-221ENST00000540209 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
RAP1B-221ENST00000540209 SETD1AO15047 1707 aaKnown RBP28.91■■■□□ 2.22
RAP1B-221ENST00000540209 CCDC144AA2RUR9 1427 aa28.89■■■□□ 2.22
RAP1B-221ENST00000540209 AMOTL2Q9Y2J4 779 aa28.89■■■□□ 2.22
RAP1B-221ENST00000540209 METP08581 1390 aa28.88■■■□□ 2.21
RAP1B-221ENST00000540209 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.88■■■□□ 2.21
RAP1B-221ENST00000540209 RPGRIP1LQ68CZ1 1315 aa28.88■■■□□ 2.21
RAP1B-221ENST00000540209 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
RAP1B-221ENST00000540209 IFT172Q9UG01 1749 aa28.86■■■□□ 2.21
RAP1B-221ENST00000540209 VGFO15240 615 aaPredicted RBP28.85■■■□□ 2.21
RAP1B-221ENST00000540209 SPATA31E1Q6ZUB1 1445 aa28.84■■■□□ 2.21
RAP1B-221ENST00000540209 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
RAP1B-221ENST00000540209 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
RAP1B-221ENST00000540209 C14orf37Q86TY3 774 aa28.78■■■□□ 2.2
RAP1B-221ENST00000540209 C19orf44Q9H6X5 657 aa28.78■■■□□ 2.2
RAP1B-221ENST00000540209 DCCP43146 1447 aa28.76■■■□□ 2.19
RAP1B-221ENST00000540209 NALCNQ8IZF0 1738 aa28.74■■■□□ 2.19
RAP1B-221ENST00000540209 PRAG1Q86YV5 1406 aa28.74■■■□□ 2.19
RAP1B-221ENST00000540209 PHLPP1O60346 1717 aa28.74■■■□□ 2.19
RAP1B-221ENST00000540209 CADPS2Q86UW7 1296 aa28.73■■■□□ 2.19
RAP1B-221ENST00000540209 PTCH1Q13635 1447 aa28.72■■■□□ 2.19
RAP1B-221ENST00000540209 ATF3P18847 181 aa28.71■■■□□ 2.19
RAP1B-221ENST00000540209 RGL3Q3MIN7 710 aa28.71■■■□□ 2.19
RAP1B-221ENST00000540209 ANKRD30BQ9BXX2 1392 aa28.71■■■□□ 2.19
RAP1B-221ENST00000540209 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
RAP1B-221ENST00000540209 ADGRL3Q9HAR2 1447 aa28.69■■■□□ 2.18
RAP1B-221ENST00000540209 HRCP23327 699 aa28.68■■■□□ 2.18
RAP1B-221ENST00000540209 COL16A1Q07092 1604 aaPredicted RBP28.67■■■□□ 2.18
RAP1B-221ENST00000540209 PIK3C2GO75747 1445 aa28.66■■■□□ 2.18
RAP1B-221ENST00000540209 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
RAP1B-221ENST00000540209 ROBO2Q9HCK4 1378 aa28.64■■■□□ 2.18
RAP1B-221ENST00000540209 MST1RQ04912 1400 aa28.64■■■□□ 2.18
RAP1B-221ENST00000540209 ASXL1Q8IXJ9 1541 aa28.62■■■□□ 2.17
RAP1B-221ENST00000540209 MYOM2P54296 1465 aa28.6■■■□□ 2.17
RAP1B-221ENST00000540209 NRXN1Q9ULB1 1477 aa28.6■■■□□ 2.17
RAP1B-221ENST00000540209 KNDC1Q76NI1 1749 aa28.6■■■□□ 2.17
RAP1B-221ENST00000540209 RGS17Q9UGC6 210 aaPredicted RBP28.59■■■□□ 2.17
RAP1B-221ENST00000540209 BRINP3Q76B58 766 aa28.58■■■□□ 2.17
RAP1B-221ENST00000540209 LAMC1P11047 1609 aa28.58■■■□□ 2.17
RAP1B-221ENST00000540209 NHSL1Q5SYE7 1610 aa28.58■■■□□ 2.17
RAP1B-221ENST00000540209 TECPR2O15040 1411 aa28.57■■■□□ 2.16
RAP1B-221ENST00000540209 JCADQ9P266 1359 aa28.55■■■□□ 2.16
RAP1B-221ENST00000540209 SHPRHQ149N8 1683 aa28.53■■■□□ 2.16
RAP1B-221ENST00000540209 LRPPRCP42704 1394 aaKnown RBP28.52■■■□□ 2.16
RAP1B-221ENST00000540209 CDC42BPGQ6DT37 1551 aa28.5■■■□□ 2.15
RAP1B-221ENST00000540209 C1orf167Q5SNV9 1468 aa28.5■■■□□ 2.15
RAP1B-221ENST00000540209 ABCC11Q96J66 1382 aa28.5■■■□□ 2.15
RAP1B-221ENST00000540209 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
RAP1B-221ENST00000540209 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
RAP1B-221ENST00000540209 YTHDC2Q9H6S0 1430 aaKnown RBP28.48■■■□□ 2.15
RAP1B-221ENST00000540209 STK26Q9P289 416 aa28.45■■■□□ 2.14
RAP1B-221ENST00000540209 CFAP70Q5T0N1 1121 aa28.42■■■□□ 2.14
RAP1B-221ENST00000540209 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
RAP1B-221ENST00000540209 PLEKHH1Q9ULM0 1364 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms