RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
SPARC-209ENST00000539687 CAMSAP1Q5T5Y3 1602 aa13.98□□□□□ -0.17
SPARC-209ENST00000539687 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
SPARC-209ENST00000539687 ST20-MTHFSA0A0A6YYL1 179 aa13.98□□□□□ -0.17
SPARC-209ENST00000539687 NPATQ14207 1427 aa13.98□□□□□ -0.17
SPARC-209ENST00000539687 ADGRB3O60242 1522 aa13.97□□□□□ -0.17
SPARC-209ENST00000539687 AGLP35573 1532 aa13.97□□□□□ -0.17
SPARC-209ENST00000539687 RAPGEF3O95398 923 aa13.97□□□□□ -0.17
SPARC-209ENST00000539687 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
SPARC-209ENST00000539687 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
SPARC-209ENST00000539687 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
SPARC-209ENST00000539687 COL17A1Q9UMD9 1497 aaPredicted RBP13.97□□□□□ -0.17
SPARC-209ENST00000539687 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
SPARC-209ENST00000539687 TMF1P82094 1093 aa13.96□□□□□ -0.17
SPARC-209ENST00000539687 GGT6Q6P531 493 aa13.96□□□□□ -0.17
SPARC-209ENST00000539687 FBXO41Q8TF61 875 aa13.95□□□□□ -0.18
SPARC-209ENST00000539687 NOS1P29475 1434 aa13.95□□□□□ -0.18
SPARC-209ENST00000539687 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
SPARC-209ENST00000539687 IFT172Q9UG01 1749 aa13.94□□□□□ -0.18
SPARC-209ENST00000539687 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
SPARC-209ENST00000539687 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SPARC-209ENST00000539687 SETBP1Q9Y6X0 1596 aa13.92□□□□□ -0.18
SPARC-209ENST00000539687 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
SPARC-209ENST00000539687 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
SPARC-209ENST00000539687 RALBP1Q15311 655 aa13.91□□□□□ -0.18
SPARC-209ENST00000539687 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
SPARC-209ENST00000539687 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
SPARC-209ENST00000539687 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
SPARC-209ENST00000539687 TESK2Q96S53 571 aa13.89□□□□□ -0.19
SPARC-209ENST00000539687 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
SPARC-209ENST00000539687 ARHGEF40Q8TER5 1519 aa13.88□□□□□ -0.19
SPARC-209ENST00000539687 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
SPARC-209ENST00000539687 PPLO60437 1756 aa13.87□□□□□ -0.19
SPARC-209ENST00000539687 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
SPARC-209ENST00000539687 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
SPARC-209ENST00000539687 ZFYVE9O95405 1425 aa13.86□□□□□ -0.19
SPARC-209ENST00000539687 SYNMO15061 1565 aa13.85□□□□□ -0.19
SPARC-209ENST00000539687 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
SPARC-209ENST00000539687 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
SPARC-209ENST00000539687 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
SPARC-209ENST00000539687 PREX1Q8TCU6 1659 aa13.84□□□□□ -0.19
SPARC-209ENST00000539687 MYBBP1AQ9BQG0 1328 aaKnown RBP13.84□□□□□ -0.19
SPARC-209ENST00000539687 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
SPARC-209ENST00000539687 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
SPARC-209ENST00000539687 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
SPARC-209ENST00000539687 ADGRF5Q8IZF2 1346 aa13.82□□□□□ -0.2
SPARC-209ENST00000539687 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
SPARC-209ENST00000539687 SIGLEC1Q9BZZ2 1709 aa13.81□□□□□ -0.2
SPARC-209ENST00000539687 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPARC-209ENST00000539687 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
SPARC-209ENST00000539687 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
SPARC-209ENST00000539687 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
SPARC-209ENST00000539687 PARD3Q8TEW0 1356 aa13.8□□□□□ -0.2
SPARC-209ENST00000539687 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
SPARC-209ENST00000539687 INSRP06213 1382 aa13.79□□□□□ -0.2
SPARC-209ENST00000539687 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
SPARC-209ENST00000539687 NEFLP07196 543 aa13.78□□□□□ -0.2
SPARC-209ENST00000539687 NLRP13Q86W25 1043 aa13.78□□□□□ -0.2
SPARC-209ENST00000539687 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
SPARC-209ENST00000539687 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
SPARC-209ENST00000539687 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
SPARC-209ENST00000539687 ZBED9Q6R2W3 1325 aa13.78□□□□□ -0.2
SPARC-209ENST00000539687 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
SPARC-209ENST00000539687 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
SPARC-209ENST00000539687 ADGRB1O14514 1584 aa13.77□□□□□ -0.21
SPARC-209ENST00000539687 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
SPARC-209ENST00000539687 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
SPARC-209ENST00000539687 PER1O15534 1290 aaPredicted RBP13.76□□□□□ -0.21
SPARC-209ENST00000539687 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
SPARC-209ENST00000539687 IDI1Q13907 227 aa13.75□□□□□ -0.21
SPARC-209ENST00000539687 PANK3Q9H999 370 aa13.75□□□□□ -0.21
SPARC-209ENST00000539687 CLTCQ00610 1675 aaKnown RBP13.75□□□□□ -0.21
SPARC-209ENST00000539687 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
SPARC-209ENST00000539687 KNSTRNQ9Y448 316 aa13.74□□□□□ -0.21
SPARC-209ENST00000539687 HDGFP51858 240 aaKnown RBP13.72□□□□□ -0.21
SPARC-209ENST00000539687 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
SPARC-209ENST00000539687 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
SPARC-209ENST00000539687 PTPRMP28827 1452 aa13.72□□□□□ -0.21
SPARC-209ENST00000539687 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.21
SPARC-209ENST00000539687 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.21
SPARC-209ENST00000539687 CCDC184Q52MB2 194 aa13.71□□□□□ -0.21
SPARC-209ENST00000539687 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
SPARC-209ENST00000539687 ADAMTSL3P82987 1691 aa13.71□□□□□ -0.21
SPARC-209ENST00000539687 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
SPARC-209ENST00000539687 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
SPARC-209ENST00000539687 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPARC-209ENST00000539687 MYOM1P52179 1685 aa13.69□□□□□ -0.22
SPARC-209ENST00000539687 EVC2Q86UK5 1308 aa13.68□□□□□ -0.22
SPARC-209ENST00000539687 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
SPARC-209ENST00000539687 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
SPARC-209ENST00000539687 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
SPARC-209ENST00000539687 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
SPARC-209ENST00000539687 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
SPARC-209ENST00000539687 TRAK1Q9UPV9 953 aa13.66□□□□□ -0.22
SPARC-209ENST00000539687 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
SPARC-209ENST00000539687 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
SPARC-209ENST00000539687 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
SPARC-209ENST00000539687 PDE3BQ13370 1112 aa13.64□□□□□ -0.23
SPARC-209ENST00000539687 CC2D1BQ5T0F9 858 aaKnown RBP13.64□□□□□ -0.23
SPARC-209ENST00000539687 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms