RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 KIAA1468Q9P260 1216 aa6.21□□□□□ -1.42
SNHG1-210ENST00000539303 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
SNHG1-210ENST00000539303 ST18O60284 1047 aa6.2□□□□□ -1.42
SNHG1-210ENST00000539303 MCM6Q14566 821 aa6.2□□□□□ -1.42
SNHG1-210ENST00000539303 PACS2Q86VP3 889 aa6.2□□□□□ -1.42
SNHG1-210ENST00000539303 SEPT9Q9UHD8 586 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-210ENST00000539303 ERBB3P21860 1342 aa6.2□□□□□ -1.42
SNHG1-210ENST00000539303 MOXD2PA6NHM9 499 aa6.19□□□□□ -1.42
SNHG1-210ENST00000539303 NDUFV2P19404 249 aa6.19□□□□□ -1.42
SNHG1-210ENST00000539303 CSPP1Q1MSJ5 1256 aa6.19□□□□□ -1.42
SNHG1-210ENST00000539303 FLIIQ13045 1269 aa6.18□□□□□ -1.42
SNHG1-210ENST00000539303 RIC3Q7Z5B4 369 aa6.18□□□□□ -1.42
SNHG1-210ENST00000539303 RDH13Q8NBN7 331 aa6.18□□□□□ -1.42
SNHG1-210ENST00000539303 POM121Q96HA1 1249 aa6.18□□□□□ -1.42
SNHG1-210ENST00000539303 POTEB3A0JP26 581 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 SLC10A3P09131 477 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 RFC5P40937 340 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 QPCTQ16769 361 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 SWT1Q5T5J6 900 aaKnown RBP6.17□□□□□ -1.42
SNHG1-210ENST00000539303 POTEBQ6S5H4 581 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 HLA-CQ95604 372 aa6.17□□□□□ -1.42
SNHG1-210ENST00000539303 FAM205CA6NFA0 338 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 ARHGAP33O14559 1287 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 EMP3P54852 163 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 LCE2DQ5TA82 110 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-210ENST00000539303 RSBN1LQ6PCB5 846 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-210ENST00000539303 NUTM1Q86Y26 1132 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 SULF1Q8IWU6 871 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 SNRKQ9NRH2 765 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 PCDHB15Q9Y5E8 787 aa6.16□□□□□ -1.42
SNHG1-210ENST00000539303 UBTFP17480 764 aaKnown RBP6.15□□□□□ -1.42
SNHG1-210ENST00000539303 GUCA2AQ02747 115 aa6.15□□□□□ -1.42
SNHG1-210ENST00000539303 CABLES1Q8TDN4 633 aa6.15□□□□□ -1.42
SNHG1-210ENST00000539303 ARID3AQ99856 593 aa6.15□□□□□ -1.42
SNHG1-210ENST00000539303 SPTLC1O15269 473 aa6.14□□□□□ -1.43
SNHG1-210ENST00000539303 KCNH8Q96L42 1107 aa6.14□□□□□ -1.43
SNHG1-210ENST00000539303 ARXQ96QS3 562 aa6.14□□□□□ -1.43
SNHG1-210ENST00000539303 RABGEF1Q9UJ41 708 aa6.14□□□□□ -1.43
SNHG1-210ENST00000539303 VPS9D1Q9Y2B5 631 aa6.14□□□□□ -1.43
SNHG1-210ENST00000539303 GCGRP47871 477 aa6.13□□□□□ -1.43
SNHG1-210ENST00000539303 RTL5Q5HYW3 569 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-210ENST00000539303 HOXA2O43364 376 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 KDM4AO75164 1064 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 DIXDC1Q155Q3 683 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 PPP2R2DQ66LE6 453 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 SAMD7Q7Z3H4 446 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 HS3ST6Q96QI5 342 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 PCDHGC3Q9UN70 934 aa6.12□□□□□ -1.43
SNHG1-210ENST00000539303 A6NJR5 290 aa6.11□□□□□ -1.43
SNHG1-210ENST00000539303 APBB1O00213 710 aa6.11□□□□□ -1.43
SNHG1-210ENST00000539303 LILRB3O75022 631 aa6.11□□□□□ -1.43
SNHG1-210ENST00000539303 FAM98CQ17RN3 349 aaKnown RBP6.11□□□□□ -1.43
SNHG1-210ENST00000539303 ZNF687Q8N1G0 1237 aa6.11□□□□□ -1.43
SNHG1-210ENST00000539303 FAM163AQ96GL9 167 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-210ENST00000539303 SLC4A5Q9BY07 1137 aa6.11□□□□□ -1.43
SNHG1-210ENST00000539303 SPDYE5A6NIY4 337 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 BHMG1C9JSJ3 638 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-210ENST00000539303 TRAK2O60296 914 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 RNF40O75150 1001 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 HRCP23327 699 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 HOMEZQ8IX15 550 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 MTMR14Q8NCE2 650 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 COG6Q9Y2V7 657 aa6.1□□□□□ -1.43
SNHG1-210ENST00000539303 AP1G2O75843 785 aa6.09□□□□□ -1.43
SNHG1-210ENST00000539303 FDX1P10109 184 aa6.09□□□□□ -1.43
SNHG1-210ENST00000539303 PBX2P40425 430 aa6.09□□□□□ -1.43
SNHG1-210ENST00000539303 FUT2Q10981 343 aa6.09□□□□□ -1.43
SNHG1-210ENST00000539303 TUSC1Q2TAM9 212 aa6.09□□□□□ -1.43
SNHG1-210ENST00000539303 PROSER2Q86WR7 435 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-210ENST00000539303 FNBP4Q8N3X1 1017 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-210ENST00000539303 NUTM2BA6NNL0 878 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 NUTM2EB1AL46 878 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 CFHP08603 1231 aa6.08□□□□□ -1.44
SNHG1-210ENST00000539303 NUTM2DQ5VT03 806 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 NUTM2AQ8IVF1 878 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 ZFRQ96KR1 1074 aaKnown RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 ZNF777Q9ULD5 760 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-210ENST00000539303 USP17L8P0C7I0 530 aa6.07□□□□□ -1.44
SNHG1-210ENST00000539303 TMEM259Q4ZIN3 620 aa6.07□□□□□ -1.44
SNHG1-210ENST00000539303 BANK1Q8NDB2 785 aa6.07□□□□□ -1.44
SNHG1-210ENST00000539303 SYMPKQ92797 1274 aaKnown RBP6.07□□□□□ -1.44
SNHG1-210ENST00000539303 GDPD2Q9HCC8 539 aa6.07□□□□□ -1.44
SNHG1-210ENST00000539303 HMX1Q9NP08 348 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-210ENST00000539303 GJA5P36382 358 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 USP46P62068 366 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 CTDSPL2Q05D32 466 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 ADGRD1Q6QNK2 874 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 CCDC82Q8N4S0 544 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 TBC1D2BQ9UPU7 963 aa6.06□□□□□ -1.44
SNHG1-210ENST00000539303 CFAP99D6REC4 459 aa6.05□□□□□ -1.44
SNHG1-210ENST00000539303 RAD21O60216 631 aa6.05□□□□□ -1.44
SNHG1-210ENST00000539303 LSM11P83369 360 aaKnown RBP eCLIP6.05□□□□□ -1.44
SNHG1-210ENST00000539303 PUS10Q3MIT2 529 aaKnown RBP6.05□□□□□ -1.44
SNHG1-210ENST00000539303 PRPF38BQ5VTL8 546 aaKnown RBP6.05□□□□□ -1.44
SNHG1-210ENST00000539303 SLF2Q8IX21 1173 aa6.05□□□□□ -1.44
SNHG1-210ENST00000539303 TSC1Q92574 1164 aa6.05□□□□□ -1.44
SNHG1-210ENST00000539303 NBPF3Q9H094 633 aa6.05□□□□□ -1.44
SNHG1-210ENST00000539303 HRO43593 1189 aa6.04□□□□□ -1.44
SNHG1-210ENST00000539303 HDGFP51858 240 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms