RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RIMBP2O15034 1052 aa2.05□□□□□ -2.08
HIF1A-204ENST00000539097 GNPATO15228 680 aa2.05□□□□□ -2.08
HIF1A-204ENST00000539097 EVI5O60447 810 aa2.05□□□□□ -2.08
HIF1A-204ENST00000539097 POTEEQ6S8J3 1075 aa2.05□□□□□ -2.08
HIF1A-204ENST00000539097 WWC1Q8IX03 1113 aa2.05□□□□□ -2.08
HIF1A-204ENST00000539097 GPKOWQ92917 476 aaPredicted RBP eCLIP2.05□□□□□ -2.08
HIF1A-204ENST00000539097 HRO43593 1189 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 PLCG2P16885 1265 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 EN1Q05925 392 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-204ENST00000539097 NYAP1Q6ZVC0 841 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 HOMEZQ8IX15 550 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 COL9A1P20849 921 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 TRAIPQ9BWF2 469 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 ERCC3P19447 782 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 DESI1Q6ICB0 168 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 NFATC2IPQ8NCF5 419 aa2.04□□□□□ -2.08
HIF1A-204ENST00000539097 A0A0G2JS52 829 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 SPDYE5A6NIY4 337 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 MDM2Q00987 491 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-204ENST00000539097 QPCTQ16769 361 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 METTL3Q86U44 580 aaKnown RBP2.03□□□□□ -2.08
HIF1A-204ENST00000539097 KRI1Q8N9T8 703 aaKnown RBP2.03□□□□□ -2.08
HIF1A-204ENST00000539097 ZMYND15Q9H091 742 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 NUDT7P0C024 238 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 MCM6Q14566 821 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 ADAM33Q9BZ11 813 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 LIMD1Q9UGP4 676 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 GPSM3Q9Y4H4 160 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 MAP3K9P80192 1104 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 TTLL12Q14166 644 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-204ENST00000539097 ELOAQ14241 798 aaKnown RBP2.03□□□□□ -2.08
HIF1A-204ENST00000539097 SNRKQ9NRH2 765 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 POLR3EQ9NVU0 708 aa2.03□□□□□ -2.08
HIF1A-204ENST00000539097 SMAPO00193 183 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 ITGAEP38570 1179 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 PADI6Q6TGC4 694 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 FNBP4Q8N3X1 1017 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-204ENST00000539097 CCDC82Q8N4S0 544 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.02□□□□□ -2.09
HIF1A-204ENST00000539097 PLA2G2EQ9NZK7 142 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 SULF1Q8IWU6 871 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 MPNDQ8N594 471 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 ADAMTS19Q8TE59 1207 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 PCMTD1Q96MG8 357 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-204ENST00000539097 PCGF6Q9BYE7 350 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.02□□□□□ -2.09
HIF1A-204ENST00000539097 TSKSQ9UJT2 592 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-204ENST00000539097 SPTLC1O15269 473 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 GUCA2AQ02747 115 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 COL19A1Q14993 1142 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 GPR153Q6NV75 609 aa2.02□□□□□ -2.09
HIF1A-204ENST00000539097 WIPF1O43516 503 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 FOSBP53539 338 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 WASHC4Q2M389 1173 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 PROX2Q3B8N5 592 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 ARSIQ5FYB1 569 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 XP32Q5T750 250 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 KCTD17Q8N5Z5 321 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 SLAIN1Q8ND83 568 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 EPS8L1Q8TE68 723 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 HMX1Q9NP08 348 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-204ENST00000539097 SERPINA10Q9UK55 444 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 MAP3K7O43318 606 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 MYSM1Q5VVJ2 828 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 IRX2Q9BZI1 471 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-204ENST00000539097 USTQ9Y2C2 406 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 PCDHB15Q9Y5E8 787 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 POM121CA8CG34 1229 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 PXYLP1Q8TE99 480 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 BEGAINQ9BUH8 593 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 BCL2L12Q9HB09 334 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 FAM217BQ9NTX9 383 aaPredicted RBP2.01□□□□□ -2.09
HIF1A-204ENST00000539097 PCDHGA4Q9Y5G9 962 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 ADGRG1Q9Y653 693 aa2.01□□□□□ -2.09
HIF1A-204ENST00000539097 PPP1R3GB7ZBB8 358 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 MTMR14Q8NCE2 650 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 RBM46Q8TBY0 533 aaKnown RBP2□□□□□ -2.09
HIF1A-204ENST00000539097 ZNF428Q96B54 188 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 GPCPD1Q9NPB8 672 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 LORP23490 312 aaPredicted RBP2□□□□□ -2.09
HIF1A-204ENST00000539097 SLC4A3P48751 1232 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 FGD1P98174 961 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 RNF135Q8IUD6 432 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 KCNA1Q09470 495 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 GRIPAP1Q4V328 841 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 B4GALNT3Q6L9W6 998 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 PODXL2Q9NZ53 605 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 ZNF777Q9ULD5 760 aaPredicted RBP2□□□□□ -2.09
HIF1A-204ENST00000539097 NDUFV2P19404 249 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 SSTR3P32745 418 aaPredicted RBP2□□□□□ -2.09
HIF1A-204ENST00000539097 PPP4R3BQ5MIZ7 849 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 C6orf132Q5T0Z8 1188 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 PCDHGC3Q9UN70 934 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 AXIN2Q9Y2T1 843 aa2□□□□□ -2.09
HIF1A-204ENST00000539097 LHX6Q9UPM6 363 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 NBPF26B4DH59 902 aa1.99□□□□□ -2.09
HIF1A-204ENST00000539097 ITGBL1O95965 494 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-204ENST00000539097 PRSS12P56730 875 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms