RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
CPSF7-218ENST00000537641 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
CPSF7-218ENST00000537641 CLTCL1P53675 1640 aa16.02■□□□□ 0.16
CPSF7-218ENST00000537641 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
CPSF7-218ENST00000537641 MADDQ8WXG6 1647 aa16.02■□□□□ 0.15
CPSF7-218ENST00000537641 KANK1Q14678 1352 aa16.02■□□□□ 0.15
CPSF7-218ENST00000537641 TESK2Q96S53 571 aa16.02■□□□□ 0.15
CPSF7-218ENST00000537641 MROH1Q8NDA8 1641 aa16.01■□□□□ 0.15
CPSF7-218ENST00000537641 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
CPSF7-218ENST00000537641 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
CPSF7-218ENST00000537641 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
CPSF7-218ENST00000537641 SYNMO15061 1565 aa16■□□□□ 0.15
CPSF7-218ENST00000537641 TMF1P82094 1093 aa15.99■□□□□ 0.15
CPSF7-218ENST00000537641 ZNF518AQ6AHZ1 1483 aa15.99■□□□□ 0.15
CPSF7-218ENST00000537641 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
CPSF7-218ENST00000537641 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
CPSF7-218ENST00000537641 CRBNQ96SW2 442 aa15.99■□□□□ 0.15
CPSF7-218ENST00000537641 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
CPSF7-218ENST00000537641 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
CPSF7-218ENST00000537641 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-218ENST00000537641 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
CPSF7-218ENST00000537641 PANK3Q9H999 370 aa15.96■□□□□ 0.15
CPSF7-218ENST00000537641 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.14
CPSF7-218ENST00000537641 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
CPSF7-218ENST00000537641 KIF1BO60333 1816 aa15.95■□□□□ 0.14
CPSF7-218ENST00000537641 NEFMP07197 916 aa15.95■□□□□ 0.14
CPSF7-218ENST00000537641 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
CPSF7-218ENST00000537641 LMTK2Q8IWU2 1503 aa15.94■□□□□ 0.14
CPSF7-218ENST00000537641 KIF3BO15066 747 aa15.94■□□□□ 0.14
CPSF7-218ENST00000537641 CENPQQ7L2Z9 268 aaPredicted RBP15.94■□□□□ 0.14
CPSF7-218ENST00000537641 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
CPSF7-218ENST00000537641 CD109Q6YHK3 1445 aa15.92■□□□□ 0.14
CPSF7-218ENST00000537641 MYOM1P52179 1685 aa15.92■□□□□ 0.14
CPSF7-218ENST00000537641 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
CPSF7-218ENST00000537641 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
CPSF7-218ENST00000537641 EIF3AQ14152 1382 aaKnown RBP15.92■□□□□ 0.14
CPSF7-218ENST00000537641 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
CPSF7-218ENST00000537641 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
CPSF7-218ENST00000537641 IFT172Q9UG01 1749 aa15.91■□□□□ 0.14
CPSF7-218ENST00000537641 PLIN1O60240 522 aa15.91■□□□□ 0.14
CPSF7-218ENST00000537641 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
CPSF7-218ENST00000537641 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
CPSF7-218ENST00000537641 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-218ENST00000537641 ZNF521Q96K83 1311 aa15.9■□□□□ 0.14
CPSF7-218ENST00000537641 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
CPSF7-218ENST00000537641 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
CPSF7-218ENST00000537641 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
CPSF7-218ENST00000537641 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
CPSF7-218ENST00000537641 MYOM2P54296 1465 aa15.88■□□□□ 0.13
CPSF7-218ENST00000537641 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
CPSF7-218ENST00000537641 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
CPSF7-218ENST00000537641 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
CPSF7-218ENST00000537641 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
CPSF7-218ENST00000537641 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
CPSF7-218ENST00000537641 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
CPSF7-218ENST00000537641 FRMPD1Q5SYB0 1578 aa15.87■□□□□ 0.13
CPSF7-218ENST00000537641 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
CPSF7-218ENST00000537641 NEO1Q92859 1461 aa15.86■□□□□ 0.13
CPSF7-218ENST00000537641 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
CPSF7-218ENST00000537641 MROH2AA6NES4 1674 aa15.86■□□□□ 0.13
CPSF7-218ENST00000537641 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
CPSF7-218ENST00000537641 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
CPSF7-218ENST00000537641 UGGT1Q9NYU2 1555 aa15.85■□□□□ 0.13
CPSF7-218ENST00000537641 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
CPSF7-218ENST00000537641 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
CPSF7-218ENST00000537641 C20orf194Q5TEA3 1177 aa15.84■□□□□ 0.13
CPSF7-218ENST00000537641 ADGRB3O60242 1522 aa15.82■□□□□ 0.12
CPSF7-218ENST00000537641 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
CPSF7-218ENST00000537641 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
CPSF7-218ENST00000537641 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
CPSF7-218ENST00000537641 TRMT2AQ8IZ69 625 aaKnown RBP15.81■□□□□ 0.12
CPSF7-218ENST00000537641 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
CPSF7-218ENST00000537641 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
CPSF7-218ENST00000537641 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
CPSF7-218ENST00000537641 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
CPSF7-218ENST00000537641 DAXXQ9UER7 740 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-218ENST00000537641 PPLO60437 1756 aa15.8■□□□□ 0.12
CPSF7-218ENST00000537641 CAMSAP1Q5T5Y3 1602 aa15.8■□□□□ 0.12
CPSF7-218ENST00000537641 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
CPSF7-218ENST00000537641 ABCC3O15438 1527 aa15.79■□□□□ 0.12
CPSF7-218ENST00000537641 GSE1Q14687 1217 aa15.79■□□□□ 0.12
CPSF7-218ENST00000537641 NFKBIBQ15653 356 aa15.79■□□□□ 0.12
CPSF7-218ENST00000537641 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
CPSF7-218ENST00000537641 IL27Q8NEV9 243 aa15.78■□□□□ 0.12
CPSF7-218ENST00000537641 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
CPSF7-218ENST00000537641 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
CPSF7-218ENST00000537641 SLC24A1O60721 1099 aa15.77■□□□□ 0.12
CPSF7-218ENST00000537641 NPATQ14207 1427 aa15.77■□□□□ 0.12
CPSF7-218ENST00000537641 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.12
CPSF7-218ENST00000537641 ZC3H13Q5T200 1668 aaKnown RBP15.77■□□□□ 0.12
CPSF7-218ENST00000537641 GLI2P10070 1586 aa15.76■□□□□ 0.11
CPSF7-218ENST00000537641 E9PSI1 815 aa15.74■□□□□ 0.11
CPSF7-218ENST00000537641 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
CPSF7-218ENST00000537641 PIK3C2BO00750 1634 aa15.74■□□□□ 0.11
CPSF7-218ENST00000537641 SIGLEC1Q9BZZ2 1709 aa15.73■□□□□ 0.11
CPSF7-218ENST00000537641 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
CPSF7-218ENST00000537641 ERVK-7P63135 1459 aa15.72■□□□□ 0.11
CPSF7-218ENST00000537641 CFAP70Q5T0N1 1121 aa15.71■□□□□ 0.11
CPSF7-218ENST00000537641 GGT6Q6P531 493 aa15.71■□□□□ 0.11
CPSF7-218ENST00000537641 NOS1P29475 1434 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms