RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.53■■■■□ 3.12
CHFR-215ENST00000537551 RAB3GAP2Q9H2M9 1393 aa34.52■■■■□ 3.12
CHFR-215ENST00000537551 FOXD1Q16676 465 aa34.52■■■■□ 3.12
CHFR-215ENST00000537551 SENP3Q9H4L4 574 aaPredicted RBP34.51■■■■□ 3.12
CHFR-215ENST00000537551 ZFYVE9O95405 1425 aa34.5■■■■□ 3.11
CHFR-215ENST00000537551 NUTM2DQ5VT03 806 aaPredicted RBP34.5■■■■□ 3.11
CHFR-215ENST00000537551 TRPM2O94759 1503 aa34.5■■■■□ 3.11
CHFR-215ENST00000537551 ZNF326Q5BKZ1 582 aaKnown RBP34.49■■■■□ 3.11
CHFR-215ENST00000537551 SLC26A8Q96RN1 970 aa34.48■■■■□ 3.11
CHFR-215ENST00000537551 CPS1P31327 1500 aa34.45■■■■□ 3.11
CHFR-215ENST00000537551 IQSEC2Q5JU85 1478 aa34.45■■■■□ 3.1
CHFR-215ENST00000537551 CLTCL1P53675 1640 aa34.44■■■■□ 3.1
CHFR-215ENST00000537551 PLEKHG1Q9ULL1 1385 aa34.43■■■■□ 3.1
CHFR-215ENST00000537551 KIF1BO60333 1816 aa34.36■■■■□ 3.09
CHFR-215ENST00000537551 HRCP23327 699 aa34.35■■■■□ 3.09
CHFR-215ENST00000537551 UBAP1LF5GYI3 381 aa34.33■■■■□ 3.09
CHFR-215ENST00000537551 STRCP1A6NGW2 1772 aa34.33■■■■□ 3.09
CHFR-215ENST00000537551 CCDC144AA2RUR9 1427 aa34.32■■■■□ 3.08
CHFR-215ENST00000537551 KCNA6P17658 529 aa34.32■■■■□ 3.08
CHFR-215ENST00000537551 TBX22Q9Y458 520 aa34.31■■■■□ 3.08
CHFR-215ENST00000537551 LRRC7Q96NW7 1537 aa34.28■■■■□ 3.08
CHFR-215ENST00000537551 ADAMTS13Q76LX8 1427 aa34.24■■■■□ 3.07
CHFR-215ENST00000537551 RPGRIP1LQ68CZ1 1315 aa34.24■■■■□ 3.07
CHFR-215ENST00000537551 NEXMIFQ5QGS0 1516 aa34.23■■■■□ 3.07
CHFR-215ENST00000537551 VGFO15240 615 aaPredicted RBP34.22■■■■□ 3.07
CHFR-215ENST00000537551 TOM1O60784 492 aa34.22■■■■□ 3.07
CHFR-215ENST00000537551 RGL3Q3MIN7 710 aa34.22■■■■□ 3.07
CHFR-215ENST00000537551 PROSER2Q86WR7 435 aaPredicted RBP34.22■■■■□ 3.07
CHFR-215ENST00000537551 DIP2AQ14689 1571 aa34.18■■■■□ 3.06
CHFR-215ENST00000537551 SCAF1Q9H7N4 1312 aaKnown RBP34.16■■■■□ 3.06
CHFR-215ENST00000537551 TMEM94Q12767 1356 aa34.14■■■■□ 3.06
CHFR-215ENST00000537551 PIK3R4Q99570 1358 aa34.14■■■■□ 3.06
CHFR-215ENST00000537551 PIP4K2BP78356 416 aa34.14■■■■□ 3.06
CHFR-215ENST00000537551 RBM33Q96EV2 1170 aaKnown RBP34.14■■■■□ 3.06
CHFR-215ENST00000537551 NWD1Q149M9 1564 aa34.14■■■■□ 3.06
CHFR-215ENST00000537551 SETBP1Q9Y6X0 1596 aa34.13■■■■□ 3.05
CHFR-215ENST00000537551 CHD2O14647 1828 aaKnown RBP34.13■■■■□ 3.05
CHFR-215ENST00000537551 NKTRP30414 1462 aaKnown RBP34.13■■■■□ 3.05
CHFR-215ENST00000537551 SPATA31E1Q6ZUB1 1445 aa34.12■■■■□ 3.05
CHFR-215ENST00000537551 AMOTL2Q9Y2J4 779 aa34.1■■■■□ 3.05
CHFR-215ENST00000537551 NRXN3Q9Y4C0 1643 aa34.09■■■■□ 3.05
CHFR-215ENST00000537551 ANKRD30BQ9BXX2 1392 aa34.09■■■■□ 3.05
CHFR-215ENST00000537551 PPLO60437 1756 aa34.06■■■■□ 3.04
CHFR-215ENST00000537551 XIRP1Q702N8 1843 aaKnown RBP34.05■■■■□ 3.04
CHFR-215ENST00000537551 METP08581 1390 aa34.04■■■■□ 3.04
CHFR-215ENST00000537551 PTPRUQ92729 1446 aa34.04■■■■□ 3.04
CHFR-215ENST00000537551 TRIM26Q12899 539 aaPredicted RBP34.02■■■■□ 3.04
CHFR-215ENST00000537551 C14orf37Q86TY3 774 aa34.02■■■■□ 3.04
CHFR-215ENST00000537551 ADGRF5Q8IZF2 1346 aa34.02■■■■□ 3.04
CHFR-215ENST00000537551 MSH6P52701 1360 aa33.98■■■■□ 3.03
CHFR-215ENST00000537551 ALKQ9UM73 1620 aa33.96■■■■□ 3.03
CHFR-215ENST00000537551 NCOA3Q9Y6Q9 1424 aa33.93■■■■□ 3.02
CHFR-215ENST00000537551 IFT172Q9UG01 1749 aa33.92■■■■□ 3.02
CHFR-215ENST00000537551 XRN1Q8IZH2 1706 aaKnown RBP33.9■■■■□ 3.02
CHFR-215ENST00000537551 HSPA1LP34931 641 aa33.89■■■■□ 3.02
CHFR-215ENST00000537551 C19orf44Q9H6X5 657 aa33.88■■■■□ 3.01
CHFR-215ENST00000537551 SETD1AO15047 1707 aaKnown RBP33.86■■■■□ 3.01
CHFR-215ENST00000537551 KDM2AQ9Y2K7 1162 aa33.85■■■■□ 3.01
CHFR-215ENST00000537551 ATF3P18847 181 aa33.84■■■■□ 3.01
CHFR-215ENST00000537551 DCAF11Q8TEB1 546 aa33.84■■■■□ 3.01
CHFR-215ENST00000537551 PIK3C2GO75747 1445 aa33.84■■■■□ 3.01
CHFR-215ENST00000537551 SLAIN2Q9P270 581 aa33.83■■■■□ 3.01
CHFR-215ENST00000537551 MYOM2P54296 1465 aa33.82■■■■□ 3
CHFR-215ENST00000537551 CADPS2Q86UW7 1296 aa33.81■■■■□ 3
CHFR-215ENST00000537551 TMEM132EQ6IEE7 984 aa33.8■■■■□ 3
CHFR-215ENST00000537551 STK26Q9P289 416 aa33.8■■■■□ 3
CHFR-215ENST00000537551 C14orf93Q9H972 538 aaKnown RBP33.79■■■■□ 3
CHFR-215ENST00000537551 FAM135BQ49AJ0 1406 aa33.79■■■■□ 3
CHFR-215ENST00000537551 CFAP70Q5T0N1 1121 aa33.78■■■■□ 3
CHFR-215ENST00000537551 ROBO2Q9HCK4 1378 aa33.77■■■■□ 3
CHFR-215ENST00000537551 NRXN1Q9ULB1 1477 aa33.76■■■■□ 3
CHFR-215ENST00000537551 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.76■■■■□ 3
CHFR-215ENST00000537551 STAC3Q96MF2 364 aa33.76■■■□□ 2.99
CHFR-215ENST00000537551 PTCH1Q13635 1447 aa33.76■■■□□ 2.99
CHFR-215ENST00000537551 LRPPRCP42704 1394 aaKnown RBP33.72■■■□□ 2.99
CHFR-215ENST00000537551 DHX57Q6P158 1386 aaKnown RBP33.72■■■□□ 2.99
CHFR-215ENST00000537551 ADGRL3Q9HAR2 1447 aa33.7■■■□□ 2.99
CHFR-215ENST00000537551 PRAG1Q86YV5 1406 aa33.7■■■□□ 2.98
CHFR-215ENST00000537551 ROBO1Q9Y6N7 1651 aa33.69■■■□□ 2.98
CHFR-215ENST00000537551 DCCP43146 1447 aa33.69■■■□□ 2.98
CHFR-215ENST00000537551 ABCC11Q96J66 1382 aa33.68■■■□□ 2.98
CHFR-215ENST00000537551 ASXL1Q8IXJ9 1541 aa33.68■■■□□ 2.98
CHFR-215ENST00000537551 YTHDC2Q9H6S0 1430 aaKnown RBP33.67■■■□□ 2.98
CHFR-215ENST00000537551 SIN3AQ96ST3 1273 aa33.66■■■□□ 2.98
CHFR-215ENST00000537551 LAMC1P11047 1609 aa33.65■■■□□ 2.98
CHFR-215ENST00000537551 NEUROD1Q13562 356 aa33.65■■■□□ 2.98
CHFR-215ENST00000537551 WAPLQ7Z5K2 1190 aa33.65■■■□□ 2.98
CHFR-215ENST00000537551 TECPR2O15040 1411 aa33.63■■■□□ 2.97
CHFR-215ENST00000537551 NALCNQ8IZF0 1738 aa33.62■■■□□ 2.97
CHFR-215ENST00000537551 MST1RQ04912 1400 aa33.58■■■□□ 2.97
CHFR-215ENST00000537551 SIRT1Q96EB6 747 aa33.57■■■□□ 2.96
CHFR-215ENST00000537551 KNDC1Q76NI1 1749 aa33.56■■■□□ 2.96
CHFR-215ENST00000537551 BRINP3Q76B58 766 aa33.56■■■□□ 2.96
CHFR-215ENST00000537551 PLEKHH1Q9ULM0 1364 aa33.56■■■□□ 2.96
CHFR-215ENST00000537551 L3MBTL2Q969R5 705 aa33.54■■■□□ 2.96
CHFR-215ENST00000537551 TRAK1Q9UPV9 953 aa33.53■■■□□ 2.96
CHFR-215ENST00000537551 DISP3Q9P2K9 1392 aa33.52■■■□□ 2.96
CHFR-215ENST00000537551 POGKQ9P215 609 aa33.52■■■□□ 2.96
CHFR-215ENST00000537551 PRAM1Q96QH2 718 aa33.51■■■□□ 2.95
CHFR-215ENST00000537551 SAFB2Q14151 953 aaKnown RBP eCLIP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms