RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
LDHA-215ENST00000537296 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
LDHA-215ENST00000537296 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
LDHA-215ENST00000537296 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
LDHA-215ENST00000537296 TXNDC2Q86VQ3 553 aa16.29■□□□□ 0.2
LDHA-215ENST00000537296 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
LDHA-215ENST00000537296 FBXO41Q8TF61 875 aa16.27■□□□□ 0.2
LDHA-215ENST00000537296 CLTCL1P53675 1640 aa16.27■□□□□ 0.19
LDHA-215ENST00000537296 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
LDHA-215ENST00000537296 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
LDHA-215ENST00000537296 TRPM2O94759 1503 aa16.24■□□□□ 0.19
LDHA-215ENST00000537296 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
LDHA-215ENST00000537296 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
LDHA-215ENST00000537296 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
LDHA-215ENST00000537296 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
LDHA-215ENST00000537296 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
LDHA-215ENST00000537296 KIF1BO60333 1816 aa16.2■□□□□ 0.18
LDHA-215ENST00000537296 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
LDHA-215ENST00000537296 CPS1P31327 1500 aa16.19■□□□□ 0.18
LDHA-215ENST00000537296 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
LDHA-215ENST00000537296 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
LDHA-215ENST00000537296 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
LDHA-215ENST00000537296 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
LDHA-215ENST00000537296 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
LDHA-215ENST00000537296 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
LDHA-215ENST00000537296 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
LDHA-215ENST00000537296 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
LDHA-215ENST00000537296 BCANQ96GW7 911 aa16.14■□□□□ 0.18
LDHA-215ENST00000537296 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
LDHA-215ENST00000537296 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
LDHA-215ENST00000537296 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
LDHA-215ENST00000537296 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
LDHA-215ENST00000537296 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
LDHA-215ENST00000537296 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDHA-215ENST00000537296 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
LDHA-215ENST00000537296 NWD1Q149M9 1564 aa16.11■□□□□ 0.17
LDHA-215ENST00000537296 UBAP1LF5GYI3 381 aa16.1■□□□□ 0.17
LDHA-215ENST00000537296 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
LDHA-215ENST00000537296 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
LDHA-215ENST00000537296 PPLO60437 1756 aa16.09■□□□□ 0.17
LDHA-215ENST00000537296 KCNA6P17658 529 aa16.09■□□□□ 0.17
LDHA-215ENST00000537296 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.17
LDHA-215ENST00000537296 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.16
LDHA-215ENST00000537296 DIP2AQ14689 1571 aa16.07■□□□□ 0.16
LDHA-215ENST00000537296 TBX22Q9Y458 520 aa16.07■□□□□ 0.16
LDHA-215ENST00000537296 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
LDHA-215ENST00000537296 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
LDHA-215ENST00000537296 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
LDHA-215ENST00000537296 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
LDHA-215ENST00000537296 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
LDHA-215ENST00000537296 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
LDHA-215ENST00000537296 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
LDHA-215ENST00000537296 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
LDHA-215ENST00000537296 METP08581 1390 aa16.03■□□□□ 0.16
LDHA-215ENST00000537296 HRCP23327 699 aa16.03■□□□□ 0.16
LDHA-215ENST00000537296 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
LDHA-215ENST00000537296 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
LDHA-215ENST00000537296 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
LDHA-215ENST00000537296 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
LDHA-215ENST00000537296 TOM1O60784 492 aa16■□□□□ 0.15
LDHA-215ENST00000537296 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
LDHA-215ENST00000537296 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
LDHA-215ENST00000537296 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
LDHA-215ENST00000537296 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
LDHA-215ENST00000537296 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
LDHA-215ENST00000537296 ZBTB22O15209 634 aa15.95■□□□□ 0.14
LDHA-215ENST00000537296 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
LDHA-215ENST00000537296 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
LDHA-215ENST00000537296 HSPA1LP34931 641 aa15.94■□□□□ 0.14
LDHA-215ENST00000537296 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
LDHA-215ENST00000537296 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
LDHA-215ENST00000537296 MSH6P52701 1360 aa15.92■□□□□ 0.14
LDHA-215ENST00000537296 ASXL1Q8IXJ9 1541 aa15.92■□□□□ 0.14
LDHA-215ENST00000537296 NALCNQ8IZF0 1738 aa15.91■□□□□ 0.14
LDHA-215ENST00000537296 ROBO1Q9Y6N7 1651 aa15.91■□□□□ 0.14
LDHA-215ENST00000537296 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
LDHA-215ENST00000537296 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
LDHA-215ENST00000537296 MYOM2P54296 1465 aa15.9■□□□□ 0.14
LDHA-215ENST00000537296 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
LDHA-215ENST00000537296 NCOA3Q9Y6Q9 1424 aa15.9■□□□□ 0.14
LDHA-215ENST00000537296 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
LDHA-215ENST00000537296 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
LDHA-215ENST00000537296 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
LDHA-215ENST00000537296 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
LDHA-215ENST00000537296 PTCH1Q13635 1447 aa15.87■□□□□ 0.13
LDHA-215ENST00000537296 CFAP70Q5T0N1 1121 aa15.86■□□□□ 0.13
LDHA-215ENST00000537296 SLAIN2Q9P270 581 aa15.86■□□□□ 0.13
LDHA-215ENST00000537296 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
LDHA-215ENST00000537296 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
LDHA-215ENST00000537296 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
LDHA-215ENST00000537296 STK26Q9P289 416 aa15.85■□□□□ 0.13
LDHA-215ENST00000537296 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
LDHA-215ENST00000537296 LAMC1P11047 1609 aa15.85■□□□□ 0.13
LDHA-215ENST00000537296 KNDC1Q76NI1 1749 aa15.84■□□□□ 0.13
LDHA-215ENST00000537296 ADGRL3Q9HAR2 1447 aa15.84■□□□□ 0.13
LDHA-215ENST00000537296 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
LDHA-215ENST00000537296 ATF3P18847 181 aa15.83■□□□□ 0.12
LDHA-215ENST00000537296 LRPPRCP42704 1394 aaKnown RBP15.82■□□□□ 0.12
LDHA-215ENST00000537296 YTHDC2Q9H6S0 1430 aaKnown RBP15.82■□□□□ 0.12
LDHA-215ENST00000537296 CADPS2Q86UW7 1296 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms