RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ITGAEP38570 1179 aa16.65■□□□□ 0.26
CHRNB1-202ENST00000536404 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
CHRNB1-202ENST00000536404 MIER1Q8N108 512 aa16.63■□□□□ 0.25
CHRNB1-202ENST00000536404 SLC52A1Q9NWF4 448 aa16.63■□□□□ 0.25
CHRNB1-202ENST00000536404 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
CHRNB1-202ENST00000536404 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
CHRNB1-202ENST00000536404 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
CHRNB1-202ENST00000536404 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
CHRNB1-202ENST00000536404 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
CHRNB1-202ENST00000536404 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
CHRNB1-202ENST00000536404 TET3O43151 1660 aa16.59■□□□□ 0.25
CHRNB1-202ENST00000536404 UNC13BO14795 1591 aa16.58■□□□□ 0.25
CHRNB1-202ENST00000536404 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.25
CHRNB1-202ENST00000536404 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
CHRNB1-202ENST00000536404 BCANQ96GW7 911 aa16.56■□□□□ 0.24
CHRNB1-202ENST00000536404 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
CHRNB1-202ENST00000536404 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
CHRNB1-202ENST00000536404 KCNA6P17658 529 aa16.55■□□□□ 0.24
CHRNB1-202ENST00000536404 NUP155O75694 1391 aa16.54■□□□□ 0.24
CHRNB1-202ENST00000536404 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
CHRNB1-202ENST00000536404 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
CHRNB1-202ENST00000536404 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
CHRNB1-202ENST00000536404 E9PCH4 1651 aa16.53■□□□□ 0.24
CHRNB1-202ENST00000536404 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
CHRNB1-202ENST00000536404 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
CHRNB1-202ENST00000536404 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
CHRNB1-202ENST00000536404 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.23
CHRNB1-202ENST00000536404 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
CHRNB1-202ENST00000536404 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
CHRNB1-202ENST00000536404 PROSER2Q86WR7 435 aaPredicted RBP16.52■□□□□ 0.23
CHRNB1-202ENST00000536404 TMEM94Q12767 1356 aa16.52■□□□□ 0.23
CHRNB1-202ENST00000536404 SOCS7O14512 581 aa16.51■□□□□ 0.23
CHRNB1-202ENST00000536404 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
CHRNB1-202ENST00000536404 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
CHRNB1-202ENST00000536404 PLEKHG1Q9ULL1 1385 aa16.49■□□□□ 0.23
CHRNB1-202ENST00000536404 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
CHRNB1-202ENST00000536404 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
CHRNB1-202ENST00000536404 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHRNB1-202ENST00000536404 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
CHRNB1-202ENST00000536404 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
CHRNB1-202ENST00000536404 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
CHRNB1-202ENST00000536404 NKTRP30414 1462 aaKnown RBP16.43■□□□□ 0.22
CHRNB1-202ENST00000536404 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
CHRNB1-202ENST00000536404 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
CHRNB1-202ENST00000536404 NAIPQ13075 1403 aa16.41■□□□□ 0.22
CHRNB1-202ENST00000536404 MSH6P52701 1360 aa16.39■□□□□ 0.21
CHRNB1-202ENST00000536404 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
CHRNB1-202ENST00000536404 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
CHRNB1-202ENST00000536404 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
CHRNB1-202ENST00000536404 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
CHRNB1-202ENST00000536404 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
CHRNB1-202ENST00000536404 ROBO1Q9Y6N7 1651 aa16.36■□□□□ 0.21
CHRNB1-202ENST00000536404 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
CHRNB1-202ENST00000536404 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
CHRNB1-202ENST00000536404 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
CHRNB1-202ENST00000536404 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
CHRNB1-202ENST00000536404 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
CHRNB1-202ENST00000536404 CLTCL1P53675 1640 aa16.33■□□□□ 0.21
CHRNB1-202ENST00000536404 HFM1A2PYH4 1435 aa16.33■□□□□ 0.2
CHRNB1-202ENST00000536404 NCOA3Q9Y6Q9 1424 aa16.32■□□□□ 0.2
CHRNB1-202ENST00000536404 TRPM2O94759 1503 aa16.32■□□□□ 0.2
CHRNB1-202ENST00000536404 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
CHRNB1-202ENST00000536404 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
CHRNB1-202ENST00000536404 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
CHRNB1-202ENST00000536404 C19orf44Q9H6X5 657 aa16.3■□□□□ 0.2
CHRNB1-202ENST00000536404 METP08581 1390 aa16.3■□□□□ 0.2
CHRNB1-202ENST00000536404 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
CHRNB1-202ENST00000536404 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
CHRNB1-202ENST00000536404 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
CHRNB1-202ENST00000536404 ATF3P18847 181 aa16.29■□□□□ 0.2
CHRNB1-202ENST00000536404 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
CHRNB1-202ENST00000536404 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
CHRNB1-202ENST00000536404 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
CHRNB1-202ENST00000536404 PHLPP1O60346 1717 aa16.27■□□□□ 0.2
CHRNB1-202ENST00000536404 FOXD1Q16676 465 aa16.27■□□□□ 0.2
CHRNB1-202ENST00000536404 KIF1BO60333 1816 aa16.26■□□□□ 0.19
CHRNB1-202ENST00000536404 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
CHRNB1-202ENST00000536404 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
CHRNB1-202ENST00000536404 JCADQ9P266 1359 aa16.23■□□□□ 0.19
CHRNB1-202ENST00000536404 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
CHRNB1-202ENST00000536404 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
CHRNB1-202ENST00000536404 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
CHRNB1-202ENST00000536404 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
CHRNB1-202ENST00000536404 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
CHRNB1-202ENST00000536404 RPGRIP1LQ68CZ1 1315 aa16.2■□□□□ 0.18
CHRNB1-202ENST00000536404 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
CHRNB1-202ENST00000536404 DCCP43146 1447 aa16.18■□□□□ 0.18
CHRNB1-202ENST00000536404 MST1RQ04912 1400 aa16.18■□□□□ 0.18
CHRNB1-202ENST00000536404 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
CHRNB1-202ENST00000536404 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
CHRNB1-202ENST00000536404 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
CHRNB1-202ENST00000536404 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
CHRNB1-202ENST00000536404 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
CHRNB1-202ENST00000536404 DDX17Q92841 729 aaKnown RBP16.16■□□□□ 0.18
CHRNB1-202ENST00000536404 PPLO60437 1756 aa16.15■□□□□ 0.18
CHRNB1-202ENST00000536404 ADGRF5Q8IZF2 1346 aa16.15■□□□□ 0.18
CHRNB1-202ENST00000536404 LRP6O75581 1613 aa16.15■□□□□ 0.18
CHRNB1-202ENST00000536404 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.17
CHRNB1-202ENST00000536404 SPATA31A6Q5VVP1 1343 aa16.14■□□□□ 0.17
CHRNB1-202ENST00000536404 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms