RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
DDB1-207ENST00000535967 NAIPQ13075 1403 aa19.13■□□□□ 0.65
DDB1-207ENST00000535967 IQGAP3Q86VI3 1631 aa19.13■□□□□ 0.65
DDB1-207ENST00000535967 SYNMO15061 1565 aa19.11■□□□□ 0.65
DDB1-207ENST00000535967 LMTK2Q8IWU2 1503 aa19.11■□□□□ 0.65
DDB1-207ENST00000535967 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
DDB1-207ENST00000535967 TET3O43151 1660 aa19.11■□□□□ 0.65
DDB1-207ENST00000535967 KANK1Q14678 1352 aa19.09■□□□□ 0.65
DDB1-207ENST00000535967 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
DDB1-207ENST00000535967 EFCAB6Q5THR3 1501 aa19.08■□□□□ 0.64
DDB1-207ENST00000535967 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
DDB1-207ENST00000535967 LTKP29376 864 aa19.07■□□□□ 0.64
DDB1-207ENST00000535967 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
DDB1-207ENST00000535967 SLIT1O75093 1534 aa19.05■□□□□ 0.64
DDB1-207ENST00000535967 PIK3C2BO00750 1634 aa19.04■□□□□ 0.64
DDB1-207ENST00000535967 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
DDB1-207ENST00000535967 E9PCH4 1651 aa19.02■□□□□ 0.64
DDB1-207ENST00000535967 TXNDC2Q86VQ3 553 aa19■□□□□ 0.63
DDB1-207ENST00000535967 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
DDB1-207ENST00000535967 RPRD2Q5VT52 1461 aaKnown RBP19■□□□□ 0.63
DDB1-207ENST00000535967 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
DDB1-207ENST00000535967 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
DDB1-207ENST00000535967 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
DDB1-207ENST00000535967 SPHKAPQ2M3C7 1700 aa18.96■□□□□ 0.63
DDB1-207ENST00000535967 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
DDB1-207ENST00000535967 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
DDB1-207ENST00000535967 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
DDB1-207ENST00000535967 NUP155O75694 1391 aa18.95■□□□□ 0.62
DDB1-207ENST00000535967 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
DDB1-207ENST00000535967 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
DDB1-207ENST00000535967 TMEM94Q12767 1356 aa18.91■□□□□ 0.62
DDB1-207ENST00000535967 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
DDB1-207ENST00000535967 IDI1Q13907 227 aa18.91■□□□□ 0.62
DDB1-207ENST00000535967 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
DDB1-207ENST00000535967 NOS1P29475 1434 aa18.89■□□□□ 0.62
DDB1-207ENST00000535967 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
DDB1-207ENST00000535967 SLC26A8Q96RN1 970 aa18.89■□□□□ 0.61
DDB1-207ENST00000535967 FAM135BQ49AJ0 1406 aa18.89■□□□□ 0.61
DDB1-207ENST00000535967 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
DDB1-207ENST00000535967 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
DDB1-207ENST00000535967 ADGRB3O60242 1522 aa18.87■□□□□ 0.61
DDB1-207ENST00000535967 MYO5BQ9ULV0 1848 aa18.86■□□□□ 0.61
DDB1-207ENST00000535967 CAPN15O75808 1086 aa18.85■□□□□ 0.61
DDB1-207ENST00000535967 KCNA6P17658 529 aa18.85■□□□□ 0.61
DDB1-207ENST00000535967 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
DDB1-207ENST00000535967 TRPM2O94759 1503 aa18.84■□□□□ 0.61
DDB1-207ENST00000535967 HRCP23327 699 aa18.84■□□□□ 0.61
DDB1-207ENST00000535967 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
DDB1-207ENST00000535967 POTEAQ6S8J7 498 aa18.83■□□□□ 0.6
DDB1-207ENST00000535967 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.6
DDB1-207ENST00000535967 KIF1BO60333 1816 aa18.82■□□□□ 0.6
DDB1-207ENST00000535967 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
DDB1-207ENST00000535967 CLTCL1P53675 1640 aa18.79■□□□□ 0.6
DDB1-207ENST00000535967 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
DDB1-207ENST00000535967 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
DDB1-207ENST00000535967 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
DDB1-207ENST00000535967 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
DDB1-207ENST00000535967 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
DDB1-207ENST00000535967 SLC52A1Q9NWF4 448 aa18.75■□□□□ 0.59
DDB1-207ENST00000535967 BCANQ96GW7 911 aa18.74■□□□□ 0.59
DDB1-207ENST00000535967 MPHOSPH9Q99550 1183 aa18.74■□□□□ 0.59
DDB1-207ENST00000535967 MSH6P52701 1360 aa18.73■□□□□ 0.59
DDB1-207ENST00000535967 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
DDB1-207ENST00000535967 PLEKHG1Q9ULL1 1385 aa18.73■□□□□ 0.59
DDB1-207ENST00000535967 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
DDB1-207ENST00000535967 COL16A1Q07092 1604 aaPredicted RBP18.72■□□□□ 0.59
DDB1-207ENST00000535967 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
DDB1-207ENST00000535967 ADAMTS13Q76LX8 1427 aa18.68■□□□□ 0.58
DDB1-207ENST00000535967 LRP6O75581 1613 aa18.67■□□□□ 0.58
DDB1-207ENST00000535967 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
DDB1-207ENST00000535967 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
DDB1-207ENST00000535967 JCADQ9P266 1359 aa18.67■□□□□ 0.58
DDB1-207ENST00000535967 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
DDB1-207ENST00000535967 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
DDB1-207ENST00000535967 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
DDB1-207ENST00000535967 PPLO60437 1756 aa18.65■□□□□ 0.58
DDB1-207ENST00000535967 TBX22Q9Y458 520 aa18.65■□□□□ 0.58
DDB1-207ENST00000535967 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
DDB1-207ENST00000535967 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
DDB1-207ENST00000535967 DIP2AQ14689 1571 aa18.61■□□□□ 0.57
DDB1-207ENST00000535967 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
DDB1-207ENST00000535967 NCOA3Q9Y6Q9 1424 aa18.6■□□□□ 0.57
DDB1-207ENST00000535967 AHDC1Q5TGY3 1603 aaPredicted RBP18.6■□□□□ 0.57
DDB1-207ENST00000535967 ANKRD30BQ9BXX2 1392 aa18.6■□□□□ 0.57
DDB1-207ENST00000535967 C14orf37Q86TY3 774 aa18.59■□□□□ 0.57
DDB1-207ENST00000535967 SHPRHQ149N8 1683 aa18.59■□□□□ 0.57
DDB1-207ENST00000535967 HDGFP51858 240 aaKnown RBP18.58■□□□□ 0.57
DDB1-207ENST00000535967 NRXN3Q9Y4C0 1643 aa18.58■□□□□ 0.56
DDB1-207ENST00000535967 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDB1-207ENST00000535967 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
DDB1-207ENST00000535967 ABCB7O75027 752 aa18.57■□□□□ 0.56
DDB1-207ENST00000535967 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
DDB1-207ENST00000535967 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
DDB1-207ENST00000535967 SPATA31E1Q6ZUB1 1445 aa18.56■□□□□ 0.56
DDB1-207ENST00000535967 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
DDB1-207ENST00000535967 CADPS2Q86UW7 1296 aa18.55■□□□□ 0.56
DDB1-207ENST00000535967 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
DDB1-207ENST00000535967 XRN1Q8IZH2 1706 aaKnown RBP18.54■□□□□ 0.56
DDB1-207ENST00000535967 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
DDB1-207ENST00000535967 AMOTL2Q9Y2J4 779 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms