RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 CLTCQ00610 1675 aaKnown RBP9.3□□□□□ -0.92
CDCA3-205ENST00000535871 NLRP1Q9C000 1473 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 KIF1BO60333 1816 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 CLTCL1P53675 1640 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 ADGRB3O60242 1522 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 ZFYVE9O95405 1425 aa9.3□□□□□ -0.92
CDCA3-205ENST00000535871 SETD1BQ9UPS6 1966 aaKnown RBP9.3□□□□□ -0.92
CDCA3-205ENST00000535871 SYNMO15061 1565 aa9.29□□□□□ -0.92
CDCA3-205ENST00000535871 MYOM2P54296 1465 aa9.29□□□□□ -0.92
CDCA3-205ENST00000535871 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
CDCA3-205ENST00000535871 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CDCA3-205ENST00000535871 L3MBTL2Q969R5 705 aa9.29□□□□□ -0.92
CDCA3-205ENST00000535871 FER1L4A9Z1Z3 1794 aa9.28□□□□□ -0.92
CDCA3-205ENST00000535871 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
CDCA3-205ENST00000535871 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
CDCA3-205ENST00000535871 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
CDCA3-205ENST00000535871 TNRQ92752 1358 aa9.26□□□□□ -0.93
CDCA3-205ENST00000535871 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-205ENST00000535871 TAOK2Q9UL54 1235 aa9.26□□□□□ -0.93
CDCA3-205ENST00000535871 GPRASP1Q5JY77 1395 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 KIAA1210Q9ULL0 1709 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 PRAG1Q86YV5 1406 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 TMEM131LA2VDJ0 1609 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 HDGFP51858 240 aaKnown RBP9.25□□□□□ -0.93
CDCA3-205ENST00000535871 IDI1Q13907 227 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 RALGAPBQ86X10 1494 aa9.25□□□□□ -0.93
CDCA3-205ENST00000535871 LAMC1P11047 1609 aa9.24□□□□□ -0.93
CDCA3-205ENST00000535871 C3P01024 1663 aa9.24□□□□□ -0.93
CDCA3-205ENST00000535871 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-205ENST00000535871 IFT172Q9UG01 1749 aa9.24□□□□□ -0.93
CDCA3-205ENST00000535871 MLECQ14165 292 aa9.23□□□□□ -0.93
CDCA3-205ENST00000535871 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDCA3-205ENST00000535871 DCAF11Q8TEB1 546 aa9.23□□□□□ -0.93
CDCA3-205ENST00000535871 CFAP65Q6ZU64 1925 aaKnown RBP9.23□□□□□ -0.93
CDCA3-205ENST00000535871 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
CDCA3-205ENST00000535871 MADDQ8WXG6 1647 aa9.22□□□□□ -0.93
CDCA3-205ENST00000535871 PPLO60437 1756 aa9.22□□□□□ -0.93
CDCA3-205ENST00000535871 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.93
CDCA3-205ENST00000535871 UGGT1Q9NYU2 1555 aa9.21□□□□□ -0.93
CDCA3-205ENST00000535871 FBXO31Q5XUX0 539 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-205ENST00000535871 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
CDCA3-205ENST00000535871 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
CDCA3-205ENST00000535871 SETBP1Q9Y6X0 1596 aa9.2□□□□□ -0.94
CDCA3-205ENST00000535871 ARHGAP23Q9P227 1491 aa9.2□□□□□ -0.94
CDCA3-205ENST00000535871 SLIT1O75093 1534 aa9.2□□□□□ -0.94
CDCA3-205ENST00000535871 TRPM1Q7Z4N2 1603 aa9.2□□□□□ -0.94
CDCA3-205ENST00000535871 ZNF142P52746 1687 aaPredicted RBP9.2□□□□□ -0.94
CDCA3-205ENST00000535871 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
CDCA3-205ENST00000535871 RGL3Q3MIN7 710 aa9.19□□□□□ -0.94
CDCA3-205ENST00000535871 THEMISQ8N1K5 641 aaPredicted RBP9.19□□□□□ -0.94
CDCA3-205ENST00000535871 TMEM2Q9UHN6 1383 aa9.19□□□□□ -0.94
CDCA3-205ENST00000535871 PTPRMP28827 1452 aa9.19□□□□□ -0.94
CDCA3-205ENST00000535871 RIMS1Q86UR5 1692 aaKnown RBP9.19□□□□□ -0.94
CDCA3-205ENST00000535871 UBR1Q8IWV7 1749 aa9.19□□□□□ -0.94
CDCA3-205ENST00000535871 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDCA3-205ENST00000535871 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
CDCA3-205ENST00000535871 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-205ENST00000535871 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
CDCA3-205ENST00000535871 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
CDCA3-205ENST00000535871 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
CDCA3-205ENST00000535871 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-205ENST00000535871 RIMS2Q9UQ26 1411 aa9.16□□□□□ -0.94
CDCA3-205ENST00000535871 ROCK2O75116 1388 aaKnown RBP9.16□□□□□ -0.94
CDCA3-205ENST00000535871 EIF3AQ14152 1382 aaKnown RBP9.15□□□□□ -0.94
CDCA3-205ENST00000535871 PLEKHG1Q9ULL1 1385 aa9.15□□□□□ -0.94
CDCA3-205ENST00000535871 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.94
CDCA3-205ENST00000535871 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CDCA3-205ENST00000535871 KDM2AQ9Y2K7 1162 aa9.15□□□□□ -0.94
CDCA3-205ENST00000535871 EID1Q9Y6B2 187 aa9.15□□□□□ -0.94
CDCA3-205ENST00000535871 SCAF11Q99590 1463 aaKnown RBP9.15□□□□□ -0.95
CDCA3-205ENST00000535871 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.95
CDCA3-205ENST00000535871 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
CDCA3-205ENST00000535871 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
CDCA3-205ENST00000535871 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
CDCA3-205ENST00000535871 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
CDCA3-205ENST00000535871 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
CDCA3-205ENST00000535871 USP47Q96K76 1375 aa9.13□□□□□ -0.95
CDCA3-205ENST00000535871 PIK3R4Q99570 1358 aa9.13□□□□□ -0.95
CDCA3-205ENST00000535871 ADGRB1O14514 1584 aa9.13□□□□□ -0.95
CDCA3-205ENST00000535871 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
CDCA3-205ENST00000535871 KLHL34Q8N239 644 aa9.13□□□□□ -0.95
CDCA3-205ENST00000535871 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
CDCA3-205ENST00000535871 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-205ENST00000535871 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
CDCA3-205ENST00000535871 PUS7Q96PZ0 661 aaKnown RBP9.12□□□□□ -0.95
CDCA3-205ENST00000535871 MED14O60244 1454 aa9.12□□□□□ -0.95
CDCA3-205ENST00000535871 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 IQGAP1P46940 1657 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 TBX22Q9Y458 520 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 ALKQ9UM73 1620 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 TECPR2O15040 1411 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 ABCC11Q96J66 1382 aa9.11□□□□□ -0.95
CDCA3-205ENST00000535871 CDCA8Q53HL2 280 aa9.1□□□□□ -0.95
CDCA3-205ENST00000535871 ANKLE2Q86XL3 938 aa9.1□□□□□ -0.95
CDCA3-205ENST00000535871 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
CDCA3-205ENST00000535871 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
CDCA3-205ENST00000535871 FAM135BQ49AJ0 1406 aa9.09□□□□□ -0.95
CDCA3-205ENST00000535871 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms