RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 ADGRB3O60242 1522 aa30.6■■■□□ 2.49
LRP6-202ENST00000535731 SPATA31A6Q5VVP1 1343 aa30.6■■■□□ 2.49
LRP6-202ENST00000535731 ZNF772Q68DY9 489 aaPredicted RBP30.6■■■□□ 2.49
LRP6-202ENST00000535731 CROCC2H7BZ55 1655 aa30.59■■■□□ 2.49
LRP6-202ENST00000535731 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
LRP6-202ENST00000535731 PLEKHG1Q9ULL1 1385 aa30.58■■■□□ 2.49
LRP6-202ENST00000535731 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
LRP6-202ENST00000535731 UPF1Q92900 1129 aaKnown RBP eCLIP30.58■■■□□ 2.49
LRP6-202ENST00000535731 NCOA3Q9Y6Q9 1424 aa30.57■■■□□ 2.48
LRP6-202ENST00000535731 MEX3CQ5U5Q3 659 aaKnown RBP30.57■■■□□ 2.48
LRP6-202ENST00000535731 TBX22Q9Y458 520 aa30.57■■■□□ 2.48
LRP6-202ENST00000535731 SETD1AO15047 1707 aaKnown RBP30.56■■■□□ 2.48
LRP6-202ENST00000535731 PPP1R15AO75807 674 aaPredicted RBP30.56■■■□□ 2.48
LRP6-202ENST00000535731 FGD6Q6ZV73 1430 aa30.55■■■□□ 2.48
LRP6-202ENST00000535731 APLP2Q06481 763 aa30.53■■■□□ 2.48
LRP6-202ENST00000535731 ZFYVE9O95405 1425 aa30.53■■■□□ 2.48
LRP6-202ENST00000535731 C14orf37Q86TY3 774 aa30.52■■■□□ 2.48
LRP6-202ENST00000535731 CADPS2Q86UW7 1296 aa30.52■■■□□ 2.48
LRP6-202ENST00000535731 RIMS2Q9UQ26 1411 aa30.51■■■□□ 2.47
LRP6-202ENST00000535731 TRIM52Q96A61 297 aa30.51■■■□□ 2.47
LRP6-202ENST00000535731 COL16A1Q07092 1604 aaPredicted RBP30.51■■■□□ 2.47
LRP6-202ENST00000535731 CHD2O14647 1828 aaKnown RBP30.5■■■□□ 2.47
LRP6-202ENST00000535731 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.5■■■□□ 2.47
LRP6-202ENST00000535731 C19orf44Q9H6X5 657 aa30.5■■■□□ 2.47
LRP6-202ENST00000535731 LRP6O75581 1613 aa30.48■■■□□ 2.47
LRP6-202ENST00000535731 ATF3P18847 181 aa30.48■■■□□ 2.47
LRP6-202ENST00000535731 RPRD2Q5VT52 1461 aaKnown RBP30.48■■■□□ 2.47
LRP6-202ENST00000535731 RXRBP28702 533 aa30.47■■■□□ 2.47
LRP6-202ENST00000535731 CHGAP10645 457 aaKnown RBP30.41■■■□□ 2.46
LRP6-202ENST00000535731 AHDC1Q5TGY3 1603 aaPredicted RBP30.4■■■□□ 2.46
LRP6-202ENST00000535731 PIK3R4Q99570 1358 aa30.4■■■□□ 2.46
LRP6-202ENST00000535731 ADGRL2O95490 1459 aa30.38■■■□□ 2.45
LRP6-202ENST00000535731 ADAMTS13Q76LX8 1427 aa30.38■■■□□ 2.45
LRP6-202ENST00000535731 ANKRD50Q9ULJ7 1429 aa30.38■■■□□ 2.45
LRP6-202ENST00000535731 NUTM2DQ5VT03 806 aaPredicted RBP30.37■■■□□ 2.45
LRP6-202ENST00000535731 TMEM131LA2VDJ0 1609 aa30.36■■■□□ 2.45
LRP6-202ENST00000535731 NUTM2BA6NNL0 878 aaPredicted RBP30.36■■■□□ 2.45
LRP6-202ENST00000535731 NUTM2EB1AL46 878 aaPredicted RBP30.36■■■□□ 2.45
LRP6-202ENST00000535731 BRINP3Q76B58 766 aa30.36■■■□□ 2.45
LRP6-202ENST00000535731 NUTM2AQ8IVF1 878 aaPredicted RBP30.36■■■□□ 2.45
LRP6-202ENST00000535731 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.34■■■□□ 2.45
LRP6-202ENST00000535731 SHPRHQ149N8 1683 aa30.34■■■□□ 2.45
LRP6-202ENST00000535731 AMOTL2Q9Y2J4 779 aa30.34■■■□□ 2.45
LRP6-202ENST00000535731 MYO5BQ9ULV0 1848 aa30.33■■■□□ 2.45
LRP6-202ENST00000535731 CDK12Q9NYV4 1490 aaPredicted RBP30.32■■■□□ 2.44
LRP6-202ENST00000535731 GCC2Q8IWJ2 1684 aa30.32■■■□□ 2.44
LRP6-202ENST00000535731 FAM50AQ14320 339 aaKnown RBP30.3■■■□□ 2.44
LRP6-202ENST00000535731 DIP2AQ14689 1571 aa30.29■■■□□ 2.44
LRP6-202ENST00000535731 AFF2P51816 1311 aa30.29■■■□□ 2.44
LRP6-202ENST00000535731 LRRC59Q96AG4 307 aaKnown RBP30.26■■■□□ 2.43
LRP6-202ENST00000535731 SETD5Q9C0A6 1442 aa30.24■■■□□ 2.43
LRP6-202ENST00000535731 DCCP43146 1447 aa30.23■■■□□ 2.43
LRP6-202ENST00000535731 PTPRUQ92729 1446 aa30.23■■■□□ 2.43
LRP6-202ENST00000535731 QTRT2Q9H974 415 aaKnown RBP30.23■■■□□ 2.43
LRP6-202ENST00000535731 TRPM2O94759 1503 aa30.22■■■□□ 2.43
LRP6-202ENST00000535731 RBM6P78332 1123 aaKnown RBP30.21■■■□□ 2.43
LRP6-202ENST00000535731 C8orf37Q96NL8 207 aa30.17■■■□□ 2.42
LRP6-202ENST00000535731 ASXL1Q8IXJ9 1541 aa30.17■■■□□ 2.42
LRP6-202ENST00000535731 MST1RQ04912 1400 aa30.14■■■□□ 2.42
LRP6-202ENST00000535731 UNC13BO14795 1591 aa30.12■■■□□ 2.41
LRP6-202ENST00000535731 E9PCH4 1651 aa30.12■■■□□ 2.41
LRP6-202ENST00000535731 RGS12O14924 1447 aa30.11■■■□□ 2.41
LRP6-202ENST00000535731 DDX17Q92841 729 aaKnown RBP30.1■■■□□ 2.41
LRP6-202ENST00000535731 PNPLA6Q8IY17 1366 aa30.09■■■□□ 2.41
LRP6-202ENST00000535731 NGLY1Q96IV0 654 aa30.09■■■□□ 2.41
LRP6-202ENST00000535731 NUP155O75694 1391 aa30.07■■■□□ 2.4
LRP6-202ENST00000535731 NHSL1Q5SYE7 1610 aa30.06■■■□□ 2.4
LRP6-202ENST00000535731 METP08581 1390 aa30.04■■■□□ 2.4
LRP6-202ENST00000535731 ROCK1Q13464 1354 aa30.04■■■□□ 2.4
LRP6-202ENST00000535731 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
LRP6-202ENST00000535731 XRN1Q8IZH2 1706 aaKnown RBP30.03■■■□□ 2.4
LRP6-202ENST00000535731 ADAMTS2O95450 1211 aa30.03■■■□□ 2.4
LRP6-202ENST00000535731 IQGAP3Q86VI3 1631 aa30.02■■■□□ 2.4
LRP6-202ENST00000535731 SETBP1Q9Y6X0 1596 aa30.02■■■□□ 2.4
LRP6-202ENST00000535731 ADGRL3Q9HAR2 1447 aa30.01■■■□□ 2.39
LRP6-202ENST00000535731 FOXD1Q16676 465 aa30■■■□□ 2.39
LRP6-202ENST00000535731 ATAD2Q6PL18 1390 aa29.99■■■□□ 2.39
LRP6-202ENST00000535731 NRXN3Q9Y4C0 1643 aa29.99■■■□□ 2.39
LRP6-202ENST00000535731 USP21Q9UK80 565 aa29.97■■■□□ 2.39
LRP6-202ENST00000535731 TRPC5Q9UL62 973 aaPredicted RBP29.96■■■□□ 2.39
LRP6-202ENST00000535731 C1orf167Q5SNV9 1468 aa29.94■■■□□ 2.38
LRP6-202ENST00000535731 ZRANB1Q9UGI0 708 aa29.94■■■□□ 2.38
LRP6-202ENST00000535731 SOS2Q07890 1332 aaPredicted RBP29.94■■■□□ 2.38
LRP6-202ENST00000535731 FNBP4Q8N3X1 1017 aaPredicted RBP29.93■■■□□ 2.38
LRP6-202ENST00000535731 ORAI2Q96SN7 254 aa29.9■■■□□ 2.38
LRP6-202ENST00000535731 SRCAPQ6ZRS2 3230 aa29.89■■■□□ 2.38
LRP6-202ENST00000535731 PTCH1Q13635 1447 aa29.88■■■□□ 2.37
LRP6-202ENST00000535731 CCDC125Q86Z20 511 aa29.87■■■□□ 2.37
LRP6-202ENST00000535731 ITGAEP38570 1179 aa29.84■■■□□ 2.37
LRP6-202ENST00000535731 NALCNQ8IZF0 1738 aa29.84■■■□□ 2.37
LRP6-202ENST00000535731 ATRNO75882 1429 aa29.83■■■□□ 2.37
LRP6-202ENST00000535731 LAMC1P11047 1609 aa29.82■■■□□ 2.36
LRP6-202ENST00000535731 VGFO15240 615 aaPredicted RBP29.8■■■□□ 2.36
LRP6-202ENST00000535731 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
LRP6-202ENST00000535731 NEXMIFQ5QGS0 1516 aa29.79■■■□□ 2.36
LRP6-202ENST00000535731 ROBO2Q9HCK4 1378 aa29.78■■■□□ 2.36
LRP6-202ENST00000535731 NPHP3Q7Z494 1330 aa29.73■■■□□ 2.35
LRP6-202ENST00000535731 GJD4Q96KN9 370 aaPredicted RBP29.73■■■□□ 2.35
LRP6-202ENST00000535731 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
LRP6-202ENST00000535731 BCL9LQ86UU0 1499 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms