RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 C19orf44Q9H6X5 657 aa12.61□□□□□ -0.39
CPSF7-214ENST00000535222 TRPC5Q9UL62 973 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-214ENST00000535222 BLMP54132 1417 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-214ENST00000535222 ZNF644Q9H582 1327 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-214ENST00000535222 FNBP4Q8N3X1 1017 aaPredicted RBP12.6□□□□□ -0.39
CPSF7-214ENST00000535222 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
CPSF7-214ENST00000535222 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
CPSF7-214ENST00000535222 CEP350Q5VT06 3117 aa12.59□□□□□ -0.39
CPSF7-214ENST00000535222 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
CPSF7-214ENST00000535222 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
CPSF7-214ENST00000535222 ATRNO75882 1429 aa12.58□□□□□ -0.4
CPSF7-214ENST00000535222 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
CPSF7-214ENST00000535222 MAST1Q9Y2H9 1570 aa12.58□□□□□ -0.4
CPSF7-214ENST00000535222 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
CPSF7-214ENST00000535222 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
CPSF7-214ENST00000535222 UTRNP46939 3433 aa12.56□□□□□ -0.4
CPSF7-214ENST00000535222 USP21Q9UK80 565 aa12.56□□□□□ -0.4
CPSF7-214ENST00000535222 ATF3P18847 181 aa12.55□□□□□ -0.4
CPSF7-214ENST00000535222 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
CPSF7-214ENST00000535222 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-214ENST00000535222 CCDC141Q6ZP82 1450 aa12.53□□□□□ -0.4
CPSF7-214ENST00000535222 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
CPSF7-214ENST00000535222 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.4
CPSF7-214ENST00000535222 PIK3C2BO00750 1634 aa12.52□□□□□ -0.4
CPSF7-214ENST00000535222 IDI1Q13907 227 aa12.52□□□□□ -0.41
CPSF7-214ENST00000535222 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
CPSF7-214ENST00000535222 TBX22Q9Y458 520 aa12.51□□□□□ -0.41
CPSF7-214ENST00000535222 DCCP43146 1447 aa12.51□□□□□ -0.41
CPSF7-214ENST00000535222 PTCH1Q13635 1447 aa12.5□□□□□ -0.41
CPSF7-214ENST00000535222 PLEKHG1Q9ULL1 1385 aa12.48□□□□□ -0.41
CPSF7-214ENST00000535222 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-214ENST00000535222 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
CPSF7-214ENST00000535222 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-214ENST00000535222 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
CPSF7-214ENST00000535222 MTUS2Q5JR59 1369 aa12.47□□□□□ -0.41
CPSF7-214ENST00000535222 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
CPSF7-214ENST00000535222 EIF2AK4Q9P2K8 1649 aaKnown RBP12.47□□□□□ -0.41
CPSF7-214ENST00000535222 UNC13BO14795 1591 aa12.47□□□□□ -0.41
CPSF7-214ENST00000535222 FYCO1Q9BQS8 1478 aa12.46□□□□□ -0.41
CPSF7-214ENST00000535222 PIK3R4Q99570 1358 aa12.46□□□□□ -0.41
CPSF7-214ENST00000535222 MST1RQ04912 1400 aa12.45□□□□□ -0.42
CPSF7-214ENST00000535222 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
CPSF7-214ENST00000535222 C14orf37Q86TY3 774 aa12.45□□□□□ -0.42
CPSF7-214ENST00000535222 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
CPSF7-214ENST00000535222 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
CPSF7-214ENST00000535222 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
CPSF7-214ENST00000535222 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
CPSF7-214ENST00000535222 CEP152O94986 1710 aa12.43□□□□□ -0.42
CPSF7-214ENST00000535222 SPHKAPQ2M3C7 1700 aa12.43□□□□□ -0.42
CPSF7-214ENST00000535222 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-214ENST00000535222 C1QTNF8P60827 252 aa12.43□□□□□ -0.42
CPSF7-214ENST00000535222 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-214ENST00000535222 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
CPSF7-214ENST00000535222 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-214ENST00000535222 LAMC1P11047 1609 aa12.41□□□□□ -0.42
CPSF7-214ENST00000535222 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-214ENST00000535222 DDX17Q92841 729 aaKnown RBP12.41□□□□□ -0.42
CPSF7-214ENST00000535222 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
CPSF7-214ENST00000535222 NOS1P29475 1434 aa12.4□□□□□ -0.42
CPSF7-214ENST00000535222 ADAMTS13Q76LX8 1427 aa12.4□□□□□ -0.42
CPSF7-214ENST00000535222 BCANQ96GW7 911 aa12.4□□□□□ -0.42
CPSF7-214ENST00000535222 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
CPSF7-214ENST00000535222 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
CPSF7-214ENST00000535222 BAG6P46379 1132 aa12.39□□□□□ -0.43
CPSF7-214ENST00000535222 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
CPSF7-214ENST00000535222 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
CPSF7-214ENST00000535222 MYOM2P54296 1465 aa12.37□□□□□ -0.43
CPSF7-214ENST00000535222 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
CPSF7-214ENST00000535222 GLI3P10071 1580 aa12.37□□□□□ -0.43
CPSF7-214ENST00000535222 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-214ENST00000535222 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
CPSF7-214ENST00000535222 LMTK2Q8IWU2 1503 aa12.36□□□□□ -0.43
CPSF7-214ENST00000535222 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
CPSF7-214ENST00000535222 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
CPSF7-214ENST00000535222 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
CPSF7-214ENST00000535222 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
CPSF7-214ENST00000535222 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
CPSF7-214ENST00000535222 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
CPSF7-214ENST00000535222 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
CPSF7-214ENST00000535222 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
CPSF7-214ENST00000535222 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
CPSF7-214ENST00000535222 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
CPSF7-214ENST00000535222 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF7-214ENST00000535222 TRPM2O94759 1503 aa12.32□□□□□ -0.44
CPSF7-214ENST00000535222 SLIT2O94813 1529 aa12.32□□□□□ -0.44
CPSF7-214ENST00000535222 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
CPSF7-214ENST00000535222 KRT27Q7Z3Y8 459 aa12.32□□□□□ -0.44
CPSF7-214ENST00000535222 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-214ENST00000535222 C1orf167Q5SNV9 1468 aa12.3□□□□□ -0.44
CPSF7-214ENST00000535222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.442e-8■■□□□ 11.7
CPSF7-214ENST00000535222 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
CPSF7-214ENST00000535222 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
CPSF7-214ENST00000535222 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
CPSF7-214ENST00000535222 RPRD2Q5VT52 1461 aaKnown RBP12.28□□□□□ -0.44
CPSF7-214ENST00000535222 VPS72Q15906 364 aa12.28□□□□□ -0.44
CPSF7-214ENST00000535222 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.45
CPSF7-214ENST00000535222 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
CPSF7-214ENST00000535222 KANK1Q14678 1352 aa12.26□□□□□ -0.45
CPSF7-214ENST00000535222 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
CPSF7-214ENST00000535222 ORAI2Q96SN7 254 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms