RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 NOS1P29475 1434 aa16.42■□□□□ 0.22
PTP4A2-216ENST00000534796 RPRD2Q5VT52 1461 aaKnown RBP16.42■□□□□ 0.22
PTP4A2-216ENST00000534796 PIK3C2BO00750 1634 aa16.41■□□□□ 0.22
PTP4A2-216ENST00000534796 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
PTP4A2-216ENST00000534796 HSPA1LP34931 641 aa16.4■□□□□ 0.22
PTP4A2-216ENST00000534796 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
PTP4A2-216ENST00000534796 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
PTP4A2-216ENST00000534796 SOCS7O14512 581 aa16.38■□□□□ 0.21
PTP4A2-216ENST00000534796 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
PTP4A2-216ENST00000534796 ADGRB3O60242 1522 aa16.36■□□□□ 0.21
PTP4A2-216ENST00000534796 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
PTP4A2-216ENST00000534796 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
PTP4A2-216ENST00000534796 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
PTP4A2-216ENST00000534796 TET3O43151 1660 aa16.34■□□□□ 0.21
PTP4A2-216ENST00000534796 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
PTP4A2-216ENST00000534796 KCNA6P17658 529 aa16.33■□□□□ 0.2
PTP4A2-216ENST00000534796 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
PTP4A2-216ENST00000534796 UNC13BO14795 1591 aa16.32■□□□□ 0.2
PTP4A2-216ENST00000534796 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
PTP4A2-216ENST00000534796 BCANQ96GW7 911 aa16.31■□□□□ 0.2
PTP4A2-216ENST00000534796 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
PTP4A2-216ENST00000534796 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
PTP4A2-216ENST00000534796 CAPN15O75808 1086 aa16.3■□□□□ 0.2
PTP4A2-216ENST00000534796 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTP4A2-216ENST00000534796 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
PTP4A2-216ENST00000534796 NUP155O75694 1391 aa16.27■□□□□ 0.2
PTP4A2-216ENST00000534796 ITGAEP38570 1179 aa16.27■□□□□ 0.2
PTP4A2-216ENST00000534796 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
PTP4A2-216ENST00000534796 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
PTP4A2-216ENST00000534796 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
PTP4A2-216ENST00000534796 FAM135BQ49AJ0 1406 aa16.25■□□□□ 0.19
PTP4A2-216ENST00000534796 TMEM131LA2VDJ0 1609 aa16.24■□□□□ 0.19
PTP4A2-216ENST00000534796 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
PTP4A2-216ENST00000534796 TBX22Q9Y458 520 aa16.23■□□□□ 0.19
PTP4A2-216ENST00000534796 MSH6P52701 1360 aa16.23■□□□□ 0.19
PTP4A2-216ENST00000534796 E9PCH4 1651 aa16.22■□□□□ 0.19
PTP4A2-216ENST00000534796 ZBTB22O15209 634 aa16.22■□□□□ 0.19
PTP4A2-216ENST00000534796 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
PTP4A2-216ENST00000534796 XIRP1Q702N8 1843 aaKnown RBP16.21■□□□□ 0.19
PTP4A2-216ENST00000534796 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
PTP4A2-216ENST00000534796 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
PTP4A2-216ENST00000534796 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
PTP4A2-216ENST00000534796 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
PTP4A2-216ENST00000534796 DSG3P32926 999 aa16.17■□□□□ 0.18
PTP4A2-216ENST00000534796 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
PTP4A2-216ENST00000534796 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
PTP4A2-216ENST00000534796 ADAMTS13Q76LX8 1427 aa16.16■□□□□ 0.18
PTP4A2-216ENST00000534796 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
PTP4A2-216ENST00000534796 NUTM2DQ5VT03 806 aaPredicted RBP16.15■□□□□ 0.18
PTP4A2-216ENST00000534796 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
PTP4A2-216ENST00000534796 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
PTP4A2-216ENST00000534796 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
PTP4A2-216ENST00000534796 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
PTP4A2-216ENST00000534796 ZNF326Q5BKZ1 582 aaKnown RBP16.12■□□□□ 0.17
PTP4A2-216ENST00000534796 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
PTP4A2-216ENST00000534796 TRPM2O94759 1503 aa16.12■□□□□ 0.17
PTP4A2-216ENST00000534796 C19orf44Q9H6X5 657 aa16.11■□□□□ 0.17
PTP4A2-216ENST00000534796 NAIPQ13075 1403 aa16.11■□□□□ 0.17
PTP4A2-216ENST00000534796 ATF3P18847 181 aa16.1■□□□□ 0.17
PTP4A2-216ENST00000534796 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
PTP4A2-216ENST00000534796 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
PTP4A2-216ENST00000534796 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
PTP4A2-216ENST00000534796 JCADQ9P266 1359 aa16.07■□□□□ 0.16
PTP4A2-216ENST00000534796 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
PTP4A2-216ENST00000534796 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
PTP4A2-216ENST00000534796 DCCP43146 1447 aa16.05■□□□□ 0.16
PTP4A2-216ENST00000534796 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
PTP4A2-216ENST00000534796 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
PTP4A2-216ENST00000534796 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
PTP4A2-216ENST00000534796 CLTCL1P53675 1640 aa16.02■□□□□ 0.16
PTP4A2-216ENST00000534796 VGFO15240 615 aaPredicted RBP16.02■□□□□ 0.16
PTP4A2-216ENST00000534796 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
PTP4A2-216ENST00000534796 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
PTP4A2-216ENST00000534796 RPGRIP1LQ68CZ1 1315 aa16.01■□□□□ 0.15
PTP4A2-216ENST00000534796 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
PTP4A2-216ENST00000534796 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
PTP4A2-216ENST00000534796 METP08581 1390 aa16■□□□□ 0.15
PTP4A2-216ENST00000534796 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
PTP4A2-216ENST00000534796 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
PTP4A2-216ENST00000534796 AHDC1Q5TGY3 1603 aaPredicted RBP15.99■□□□□ 0.15
PTP4A2-216ENST00000534796 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
PTP4A2-216ENST00000534796 KIF1BO60333 1816 aa15.98■□□□□ 0.15
PTP4A2-216ENST00000534796 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
PTP4A2-216ENST00000534796 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
PTP4A2-216ENST00000534796 ABCB7O75027 752 aa15.95■□□□□ 0.14
PTP4A2-216ENST00000534796 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
PTP4A2-216ENST00000534796 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
PTP4A2-216ENST00000534796 MST1RQ04912 1400 aa15.94■□□□□ 0.14
PTP4A2-216ENST00000534796 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
PTP4A2-216ENST00000534796 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
PTP4A2-216ENST00000534796 ZNF772Q68DY9 489 aaPredicted RBP15.92■□□□□ 0.14
PTP4A2-216ENST00000534796 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
PTP4A2-216ENST00000534796 PRAG1Q86YV5 1406 aa15.92■□□□□ 0.14
PTP4A2-216ENST00000534796 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms