RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 PKD2Q13563 968 aa12.14□□□□□ -0.47
SORL1-213ENST00000534754 NOS1P29475 1434 aa12.14□□□□□ -0.47
SORL1-213ENST00000534754 TRPM2O94759 1503 aa12.14□□□□□ -0.47
SORL1-213ENST00000534754 KIF1BO60333 1816 aa12.13□□□□□ -0.47
SORL1-213ENST00000534754 DEKP35659 375 aaKnown RBP12.13□□□□□ -0.47
SORL1-213ENST00000534754 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
SORL1-213ENST00000534754 PTPRTO14522 1441 aa12.12□□□□□ -0.47
SORL1-213ENST00000534754 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
SORL1-213ENST00000534754 EIF4G2P78344 907 aaKnown RBP eCLIP12.11□□□□□ -0.47
SORL1-213ENST00000534754 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
SORL1-213ENST00000534754 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
SORL1-213ENST00000534754 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
SORL1-213ENST00000534754 NOP58Q9Y2X3 529 aaKnown RBP12.09□□□□□ -0.47
SORL1-213ENST00000534754 TMEM131LA2VDJ0 1609 aa12.09□□□□□ -0.47
SORL1-213ENST00000534754 TNRQ92752 1358 aa12.09□□□□□ -0.47
SORL1-213ENST00000534754 CCDC184Q52MB2 194 aa12.08□□□□□ -0.48
SORL1-213ENST00000534754 PRKRIP1Q9H875 184 aaPredicted RBP12.08□□□□□ -0.48
SORL1-213ENST00000534754 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
SORL1-213ENST00000534754 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
SORL1-213ENST00000534754 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
SORL1-213ENST00000534754 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
SORL1-213ENST00000534754 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
SORL1-213ENST00000534754 CCDC7Q96M83 1385 aa12.06□□□□□ -0.48
SORL1-213ENST00000534754 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
SORL1-213ENST00000534754 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
SORL1-213ENST00000534754 PPLO60437 1756 aa12.04□□□□□ -0.48
SORL1-213ENST00000534754 A2ML1A8K2U0 1454 aa12.04□□□□□ -0.48
SORL1-213ENST00000534754 IDI1Q13907 227 aa12.03□□□□□ -0.48
SORL1-213ENST00000534754 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
SORL1-213ENST00000534754 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
SORL1-213ENST00000534754 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
SORL1-213ENST00000534754 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
SORL1-213ENST00000534754 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
SORL1-213ENST00000534754 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
SORL1-213ENST00000534754 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
SORL1-213ENST00000534754 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
SORL1-213ENST00000534754 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
SORL1-213ENST00000534754 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
SORL1-213ENST00000534754 NBR1Q14596 966 aa12.01□□□□□ -0.49
SORL1-213ENST00000534754 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
SORL1-213ENST00000534754 SLC52A1Q9NWF4 448 aa12□□□□□ -0.49
SORL1-213ENST00000534754 NEXMIFQ5QGS0 1516 aa12□□□□□ -0.49
SORL1-213ENST00000534754 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
SORL1-213ENST00000534754 SLIT1O75093 1534 aa11.98□□□□□ -0.49
SORL1-213ENST00000534754 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
SORL1-213ENST00000534754 RNF123Q5XPI4 1314 aa11.97□□□□□ -0.49
SORL1-213ENST00000534754 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
SORL1-213ENST00000534754 CCDC136Q96JN2 1154 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 ZFYVE9O95405 1425 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 IQGAP1P46940 1657 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 HSPA2P54652 639 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
SORL1-213ENST00000534754 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
SORL1-213ENST00000534754 NRXN3Q9Y4C0 1643 aa11.95□□□□□ -0.5
SORL1-213ENST00000534754 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
SORL1-213ENST00000534754 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
SORL1-213ENST00000534754 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
SORL1-213ENST00000534754 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
SORL1-213ENST00000534754 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
SORL1-213ENST00000534754 RGL3Q3MIN7 710 aa11.92□□□□□ -0.5
SORL1-213ENST00000534754 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
SORL1-213ENST00000534754 AEBP2Q6ZN18 517 aaPredicted RBP11.92□□□□□ -0.5
SORL1-213ENST00000534754 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
SORL1-213ENST00000534754 LTKP29376 864 aa11.91□□□□□ -0.5
SORL1-213ENST00000534754 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
SORL1-213ENST00000534754 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
SORL1-213ENST00000534754 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
SORL1-213ENST00000534754 MYOM2P54296 1465 aa11.9□□□□□ -0.5
SORL1-213ENST00000534754 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
SORL1-213ENST00000534754 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
SORL1-213ENST00000534754 MED14O60244 1454 aa11.88□□□□□ -0.51
SORL1-213ENST00000534754 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
SORL1-213ENST00000534754 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
SORL1-213ENST00000534754 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
SORL1-213ENST00000534754 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
SORL1-213ENST00000534754 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
SORL1-213ENST00000534754 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
SORL1-213ENST00000534754 KIAA1210Q9ULL0 1709 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 LAMC1P11047 1609 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
SORL1-213ENST00000534754 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
SORL1-213ENST00000534754 ALKQ9UM73 1620 aa11.85□□□□□ -0.51
SORL1-213ENST00000534754 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
SORL1-213ENST00000534754 ADAMTS13Q76LX8 1427 aa11.85□□□□□ -0.51
SORL1-213ENST00000534754 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
SORL1-213ENST00000534754 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
SORL1-213ENST00000534754 PLEKHG1Q9ULL1 1385 aa11.84□□□□□ -0.51
SORL1-213ENST00000534754 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
SORL1-213ENST00000534754 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
SORL1-213ENST00000534754 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
SORL1-213ENST00000534754 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
SORL1-213ENST00000534754 USP47Q96K76 1375 aa11.83□□□□□ -0.52
SORL1-213ENST00000534754 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
SORL1-213ENST00000534754 USP35Q9P2H5 1018 aa11.83□□□□□ -0.52
SORL1-213ENST00000534754 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms