RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
CTSB-233ENST00000534636 SOCS7O14512 581 aa28.2■■■□□ 2.1
CTSB-233ENST00000534636 HDGFP51858 240 aaKnown RBP28.2■■■□□ 2.1
CTSB-233ENST00000534636 SLC26A8Q96RN1 970 aa28.2■■■□□ 2.1
CTSB-233ENST00000534636 KCNA6P17658 529 aa28.18■■■□□ 2.1
CTSB-233ENST00000534636 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
CTSB-233ENST00000534636 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
CTSB-233ENST00000534636 NKTRP30414 1462 aaKnown RBP28.17■■■□□ 2.1
CTSB-233ENST00000534636 NUP155O75694 1391 aa28.17■■■□□ 2.1
CTSB-233ENST00000534636 NWD1Q149M9 1564 aa28.16■■■□□ 2.1
CTSB-233ENST00000534636 CHGAP10645 457 aaKnown RBP28.16■■■□□ 2.1
CTSB-233ENST00000534636 SENP3Q9H4L4 574 aaPredicted RBP28.16■■■□□ 2.1
CTSB-233ENST00000534636 TMEM94Q12767 1356 aa28.15■■■□□ 2.1
CTSB-233ENST00000534636 PLEKHG1Q9ULL1 1385 aa28.15■■■□□ 2.1
CTSB-233ENST00000534636 PROSER2Q86WR7 435 aaPredicted RBP28.12■■■□□ 2.09
CTSB-233ENST00000534636 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.12■■■□□ 2.09
CTSB-233ENST00000534636 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
CTSB-233ENST00000534636 PHF23Q9BUL5 403 aaPredicted RBP28.08■■■□□ 2.09
CTSB-233ENST00000534636 SPHKAPQ2M3C7 1700 aa28.06■■■□□ 2.08
CTSB-233ENST00000534636 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
CTSB-233ENST00000534636 DIP2AQ14689 1571 aa28.06■■■□□ 2.08
CTSB-233ENST00000534636 MSH6P52701 1360 aa28.05■■■□□ 2.08
CTSB-233ENST00000534636 FAM135BQ49AJ0 1406 aa28.04■■■□□ 2.08
CTSB-233ENST00000534636 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
CTSB-233ENST00000534636 ROBO1Q9Y6N7 1651 aa28.02■■■□□ 2.08
CTSB-233ENST00000534636 NUTM2DQ5VT03 806 aaPredicted RBP28■■■□□ 2.07
CTSB-233ENST00000534636 TBX22Q9Y458 520 aa28■■■□□ 2.07
CTSB-233ENST00000534636 ADAMTS13Q76LX8 1427 aa27.96■■■□□ 2.07
CTSB-233ENST00000534636 TRPM2O94759 1503 aa27.96■■■□□ 2.07
CTSB-233ENST00000534636 PIK3R4Q99570 1358 aa27.96■■■□□ 2.07
CTSB-233ENST00000534636 C14orf37Q86TY3 774 aa27.93■■■□□ 2.06
CTSB-233ENST00000534636 NAIPQ13075 1403 aa27.92■■■□□ 2.06
CTSB-233ENST00000534636 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
CTSB-233ENST00000534636 ZNF326Q5BKZ1 582 aaKnown RBP27.92■■■□□ 2.06
CTSB-233ENST00000534636 KIF1BO60333 1816 aa27.89■■■□□ 2.06
CTSB-233ENST00000534636 CLTCL1P53675 1640 aa27.89■■■□□ 2.05
CTSB-233ENST00000534636 SLAIN2Q9P270 581 aa27.88■■■□□ 2.05
CTSB-233ENST00000534636 PHLPP1O60346 1717 aa27.87■■■□□ 2.05
CTSB-233ENST00000534636 SETBP1Q9Y6X0 1596 aa27.87■■■□□ 2.05
CTSB-233ENST00000534636 HFM1A2PYH4 1435 aa27.86■■■□□ 2.05
CTSB-233ENST00000534636 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
CTSB-233ENST00000534636 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
CTSB-233ENST00000534636 TRIM52Q96A61 297 aa27.83■■■□□ 2.05
CTSB-233ENST00000534636 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
CTSB-233ENST00000534636 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
CTSB-233ENST00000534636 ATF3P18847 181 aa27.81■■■□□ 2.04
CTSB-233ENST00000534636 C19orf44Q9H6X5 657 aa27.8■■■□□ 2.04
CTSB-233ENST00000534636 NEXMIFQ5QGS0 1516 aa27.8■■■□□ 2.04
CTSB-233ENST00000534636 XRN1Q8IZH2 1706 aaKnown RBP27.8■■■□□ 2.04
CTSB-233ENST00000534636 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
CTSB-233ENST00000534636 JCADQ9P266 1359 aa27.75■■■□□ 2.03
CTSB-233ENST00000534636 SLC4A1APQ9BWU0 796 aaKnown RBP27.75■■■□□ 2.03
CTSB-233ENST00000534636 DCCP43146 1447 aa27.74■■■□□ 2.03
CTSB-233ENST00000534636 COL16A1Q07092 1604 aaPredicted RBP27.74■■■□□ 2.03
CTSB-233ENST00000534636 METP08581 1390 aa27.72■■■□□ 2.03
CTSB-233ENST00000534636 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
CTSB-233ENST00000534636 RGS17Q9UGC6 210 aaPredicted RBP27.69■■■□□ 2.02
CTSB-233ENST00000534636 VGFO15240 615 aaPredicted RBP27.67■■■□□ 2.02
CTSB-233ENST00000534636 PPLO60437 1756 aa27.64■■■□□ 2.02
CTSB-233ENST00000534636 RPGRIP1LQ68CZ1 1315 aa27.64■■■□□ 2.01
CTSB-233ENST00000534636 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
CTSB-233ENST00000534636 ADGRL3Q9HAR2 1447 aa27.63■■■□□ 2.01
CTSB-233ENST00000534636 NALCNQ8IZF0 1738 aa27.62■■■□□ 2.01
CTSB-233ENST00000534636 BRINP3Q76B58 766 aa27.62■■■□□ 2.01
CTSB-233ENST00000534636 SPATA31A6Q5VVP1 1343 aa27.62■■■□□ 2.01
CTSB-233ENST00000534636 ASXL1Q8IXJ9 1541 aa27.62■■■□□ 2.01
CTSB-233ENST00000534636 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
CTSB-233ENST00000534636 MST1RQ04912 1400 aa27.59■■■□□ 2.01
CTSB-233ENST00000534636 PTCH1Q13635 1447 aa27.59■■■□□ 2.01
CTSB-233ENST00000534636 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
CTSB-233ENST00000534636 MEX3CQ5U5Q3 659 aaKnown RBP27.58■■■□□ 2.01
CTSB-233ENST00000534636 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
CTSB-233ENST00000534636 POTEAQ6S8J7 498 aa27.56■■■□□ 2
CTSB-233ENST00000534636 FOXD1Q16676 465 aa27.55■■■□□ 2
CTSB-233ENST00000534636 LRP6O75581 1613 aa27.53■■■□□ 2
CTSB-233ENST00000534636 ACIN1Q9UKV3 1341 aaKnown RBP27.51■■□□□ 1.99
CTSB-233ENST00000534636 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
CTSB-233ENST00000534636 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
CTSB-233ENST00000534636 ROBO2Q9HCK4 1378 aa27.49■■□□□ 1.99
CTSB-233ENST00000534636 SETD5Q9C0A6 1442 aa27.49■■□□□ 1.99
CTSB-233ENST00000534636 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
CTSB-233ENST00000534636 ZNF772Q68DY9 489 aaPredicted RBP27.46■■□□□ 1.99
CTSB-233ENST00000534636 C1orf167Q5SNV9 1468 aa27.45■■□□□ 1.99
CTSB-233ENST00000534636 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
CTSB-233ENST00000534636 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
CTSB-233ENST00000534636 ANKRD30BQ9BXX2 1392 aa27.45■■□□□ 1.98
CTSB-233ENST00000534636 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
CTSB-233ENST00000534636 NUTM2BA6NNL0 878 aaPredicted RBP27.44■■□□□ 1.98
CTSB-233ENST00000534636 NUTM2EB1AL46 878 aaPredicted RBP27.44■■□□□ 1.98
CTSB-233ENST00000534636 NUTM2AQ8IVF1 878 aaPredicted RBP27.44■■□□□ 1.98
CTSB-233ENST00000534636 ADGRF5Q8IZF2 1346 aa27.41■■□□□ 1.98
CTSB-233ENST00000534636 LAMC1P11047 1609 aa27.39■■□□□ 1.98
CTSB-233ENST00000534636 DDX17Q92841 729 aaKnown RBP27.39■■□□□ 1.98
CTSB-233ENST00000534636 CDC42BPGQ6DT37 1551 aa27.38■■□□□ 1.97
CTSB-233ENST00000534636 PNPLA6Q8IY17 1366 aa27.36■■□□□ 1.97
CTSB-233ENST00000534636 KNDC1Q76NI1 1749 aa27.36■■□□□ 1.97
CTSB-233ENST00000534636 PIK3C2GO75747 1445 aa27.35■■□□□ 1.97
CTSB-233ENST00000534636 TECPR2O15040 1411 aa27.33■■□□□ 1.97
CTSB-233ENST00000534636 STK26Q9P289 416 aa27.33■■□□□ 1.97
CTSB-233ENST00000534636 LRPPRCP42704 1394 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms