RNA–Protein interactions for RNA: ENST00000534458.1

MSANTD4-205, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

TSL 4

Gene MSANTD4, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-205ENST00000534458 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
MSANTD4-205ENST00000534458 SENP3Q9H4L4 574 aaPredicted RBP27.52■■■□□ 2
MSANTD4-205ENST00000534458 LRRC7Q96NW7 1537 aa27.5■■□□□ 1.99
MSANTD4-205ENST00000534458 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
MSANTD4-205ENST00000534458 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
MSANTD4-205ENST00000534458 ALKQ9UM73 1620 aa27.45■■□□□ 1.98
MSANTD4-205ENST00000534458 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
MSANTD4-205ENST00000534458 RIMS2Q9UQ26 1411 aa27.44■■□□□ 1.98
MSANTD4-205ENST00000534458 CHD2O14647 1828 aaKnown RBP27.43■■□□□ 1.98
MSANTD4-205ENST00000534458 PLEKHG1Q9ULL1 1385 aa27.4■■□□□ 1.98
MSANTD4-205ENST00000534458 HDGFP51858 240 aaKnown RBP27.4■■□□□ 1.98
MSANTD4-205ENST00000534458 KIF1BO60333 1816 aa27.39■■□□□ 1.98
MSANTD4-205ENST00000534458 SLC26A8Q96RN1 970 aa27.39■■□□□ 1.98
MSANTD4-205ENST00000534458 NWD1Q149M9 1564 aa27.39■■□□□ 1.97
MSANTD4-205ENST00000534458 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
MSANTD4-205ENST00000534458 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.36■■□□□ 1.97
MSANTD4-205ENST00000534458 CLTCL1P53675 1640 aa27.36■■□□□ 1.97
MSANTD4-205ENST00000534458 TRPM2O94759 1503 aa27.36■■□□□ 1.97
MSANTD4-205ENST00000534458 KCNA6P17658 529 aa27.35■■□□□ 1.97
MSANTD4-205ENST00000534458 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
MSANTD4-205ENST00000534458 BCANQ96GW7 911 aa27.31■■□□□ 1.96
MSANTD4-205ENST00000534458 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
MSANTD4-205ENST00000534458 DIP2AQ14689 1571 aa27.31■■□□□ 1.96
MSANTD4-205ENST00000534458 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
MSANTD4-205ENST00000534458 NKTRP30414 1462 aaKnown RBP27.3■■□□□ 1.96
MSANTD4-205ENST00000534458 ADAMTS13Q76LX8 1427 aa27.28■■□□□ 1.96
MSANTD4-205ENST00000534458 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
MSANTD4-205ENST00000534458 NUTM2DQ5VT03 806 aaPredicted RBP27.26■■□□□ 1.95
MSANTD4-205ENST00000534458 NRXN3Q9Y4C0 1643 aa27.26■■□□□ 1.95
MSANTD4-205ENST00000534458 TMEM94Q12767 1356 aa27.24■■□□□ 1.95
MSANTD4-205ENST00000534458 SLC4A1APQ9BWU0 796 aaKnown RBP27.24■■□□□ 1.95
MSANTD4-205ENST00000534458 NEXMIFQ5QGS0 1516 aa27.22■■□□□ 1.95
MSANTD4-205ENST00000534458 PROSER2Q86WR7 435 aaPredicted RBP27.22■■□□□ 1.95
MSANTD4-205ENST00000534458 RBM33Q96EV2 1170 aaKnown RBP27.22■■□□□ 1.95
MSANTD4-205ENST00000534458 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
MSANTD4-205ENST00000534458 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
MSANTD4-205ENST00000534458 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
MSANTD4-205ENST00000534458 PPLO60437 1756 aa27.16■■□□□ 1.94
MSANTD4-205ENST00000534458 XRN1Q8IZH2 1706 aaKnown RBP27.13■■□□□ 1.93
MSANTD4-205ENST00000534458 SETD5Q9C0A6 1442 aa27.12■■□□□ 1.93
MSANTD4-205ENST00000534458 NCOA3Q9Y6Q9 1424 aa27.12■■□□□ 1.93
MSANTD4-205ENST00000534458 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
MSANTD4-205ENST00000534458 PTPRUQ92729 1446 aa27.11■■□□□ 1.93
MSANTD4-205ENST00000534458 MPHOSPH9Q99550 1183 aa27.11■■□□□ 1.93
MSANTD4-205ENST00000534458 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
MSANTD4-205ENST00000534458 FAM135BQ49AJ0 1406 aa27.1■■□□□ 1.93
MSANTD4-205ENST00000534458 ROBO1Q9Y6N7 1651 aa27.1■■□□□ 1.93
MSANTD4-205ENST00000534458 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.1■■□□□ 1.93
MSANTD4-205ENST00000534458 MSH6P52701 1360 aa27.09■■□□□ 1.93
MSANTD4-205ENST00000534458 FOXD1Q16676 465 aa27.09■■□□□ 1.93
MSANTD4-205ENST00000534458 IFT172Q9UG01 1749 aa27.07■■□□□ 1.92
MSANTD4-205ENST00000534458 AMOTL2Q9Y2J4 779 aa27.06■■□□□ 1.92
MSANTD4-205ENST00000534458 RPGRIP1LQ68CZ1 1315 aa27.06■■□□□ 1.92
MSANTD4-205ENST00000534458 METP08581 1390 aa27.03■■□□□ 1.92
MSANTD4-205ENST00000534458 CCDC144AA2RUR9 1427 aa27.02■■□□□ 1.92
MSANTD4-205ENST00000534458 VGFO15240 615 aaPredicted RBP27.02■■□□□ 1.92
MSANTD4-205ENST00000534458 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
MSANTD4-205ENST00000534458 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
MSANTD4-205ENST00000534458 SPATA31E1Q6ZUB1 1445 aa26.99■■□□□ 1.91
MSANTD4-205ENST00000534458 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
MSANTD4-205ENST00000534458 C19orf44Q9H6X5 657 aa26.97■■□□□ 1.91
MSANTD4-205ENST00000534458 RGS17Q9UGC6 210 aaPredicted RBP26.96■■□□□ 1.91
MSANTD4-205ENST00000534458 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
MSANTD4-205ENST00000534458 NALCNQ8IZF0 1738 aa26.93■■□□□ 1.9
MSANTD4-205ENST00000534458 CADPS2Q86UW7 1296 aa26.92■■□□□ 1.9
MSANTD4-205ENST00000534458 DCCP43146 1447 aa26.91■■□□□ 1.9
MSANTD4-205ENST00000534458 PRAG1Q86YV5 1406 aa26.9■■□□□ 1.9
MSANTD4-205ENST00000534458 ATF3P18847 181 aa26.89■■□□□ 1.9
MSANTD4-205ENST00000534458 ANKRD30BQ9BXX2 1392 aa26.88■■□□□ 1.89
MSANTD4-205ENST00000534458 HRCP23327 699 aa26.88■■□□□ 1.89
MSANTD4-205ENST00000534458 RGL3Q3MIN7 710 aa26.88■■□□□ 1.89
MSANTD4-205ENST00000534458 PTCH1Q13635 1447 aa26.87■■□□□ 1.89
MSANTD4-205ENST00000534458 ADGRF5Q8IZF2 1346 aa26.87■■□□□ 1.89
MSANTD4-205ENST00000534458 COL16A1Q07092 1604 aaPredicted RBP26.86■■□□□ 1.89
MSANTD4-205ENST00000534458 ADGRL3Q9HAR2 1447 aa26.85■■□□□ 1.89
MSANTD4-205ENST00000534458 AHDC1Q5TGY3 1603 aaPredicted RBP26.84■■□□□ 1.89
MSANTD4-205ENST00000534458 POTEAQ6S8J7 498 aa26.83■■□□□ 1.89
MSANTD4-205ENST00000534458 JCADQ9P266 1359 aa26.82■■□□□ 1.88
MSANTD4-205ENST00000534458 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
MSANTD4-205ENST00000534458 ROBO2Q9HCK4 1378 aa26.81■■□□□ 1.88
MSANTD4-205ENST00000534458 MST1RQ04912 1400 aa26.81■■□□□ 1.88
MSANTD4-205ENST00000534458 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
MSANTD4-205ENST00000534458 NHSL1Q5SYE7 1610 aa26.79■■□□□ 1.88
MSANTD4-205ENST00000534458 ASXL1Q8IXJ9 1541 aa26.78■■□□□ 1.88
MSANTD4-205ENST00000534458 LAMC1P11047 1609 aa26.76■■□□□ 1.87
MSANTD4-205ENST00000534458 MYOM2P54296 1465 aa26.76■■□□□ 1.87
MSANTD4-205ENST00000534458 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
MSANTD4-205ENST00000534458 BRINP3Q76B58 766 aa26.76■■□□□ 1.87
MSANTD4-205ENST00000534458 SHPRHQ149N8 1683 aa26.76■■□□□ 1.87
MSANTD4-205ENST00000534458 TECPR2O15040 1411 aa26.73■■□□□ 1.87
MSANTD4-205ENST00000534458 MEX3CQ5U5Q3 659 aaKnown RBP26.73■■□□□ 1.87
MSANTD4-205ENST00000534458 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
MSANTD4-205ENST00000534458 LRP6O75581 1613 aa26.7■■□□□ 1.86
MSANTD4-205ENST00000534458 ABCC11Q96J66 1382 aa26.7■■□□□ 1.86
MSANTD4-205ENST00000534458 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
MSANTD4-205ENST00000534458 CDC42BPGQ6DT37 1551 aa26.68■■□□□ 1.86
MSANTD4-205ENST00000534458 C1orf167Q5SNV9 1468 aa26.68■■□□□ 1.86
MSANTD4-205ENST00000534458 TMEM132EQ6IEE7 984 aa26.67■■□□□ 1.86
MSANTD4-205ENST00000534458 SPATA31A6Q5VVP1 1343 aa26.66■■□□□ 1.86
MSANTD4-205ENST00000534458 YTHDC2Q9H6S0 1430 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms