RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-209ENST00000534393 PROSER2Q86WR7 435 aaPredicted RBP12.88□□□□□ -0.35
RPUSD4-209ENST00000534393 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
RPUSD4-209ENST00000534393 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
RPUSD4-209ENST00000534393 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
RPUSD4-209ENST00000534393 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
RPUSD4-209ENST00000534393 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
RPUSD4-209ENST00000534393 E9PCH4 1651 aa12.86□□□□□ -0.35
RPUSD4-209ENST00000534393 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
RPUSD4-209ENST00000534393 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
RPUSD4-209ENST00000534393 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPUSD4-209ENST00000534393 IQGAP3Q86VI3 1631 aa12.86□□□□□ -0.35
RPUSD4-209ENST00000534393 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
RPUSD4-209ENST00000534393 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
RPUSD4-209ENST00000534393 RIMS2Q9UQ26 1411 aa12.84□□□□□ -0.35
RPUSD4-209ENST00000534393 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.35
RPUSD4-209ENST00000534393 MSH6P52701 1360 aa12.83□□□□□ -0.36
RPUSD4-209ENST00000534393 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
RPUSD4-209ENST00000534393 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-209ENST00000534393 NUP155O75694 1391 aa12.81□□□□□ -0.36
RPUSD4-209ENST00000534393 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
RPUSD4-209ENST00000534393 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
RPUSD4-209ENST00000534393 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
RPUSD4-209ENST00000534393 ITGAEP38570 1179 aa12.79□□□□□ -0.36
RPUSD4-209ENST00000534393 SLAIN2Q9P270 581 aa12.79□□□□□ -0.36
RPUSD4-209ENST00000534393 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
RPUSD4-209ENST00000534393 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
RPUSD4-209ENST00000534393 PHLPP1O60346 1717 aa12.78□□□□□ -0.36
RPUSD4-209ENST00000534393 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
RPUSD4-209ENST00000534393 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
RPUSD4-209ENST00000534393 TRPM2O94759 1503 aa12.76□□□□□ -0.37
RPUSD4-209ENST00000534393 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
RPUSD4-209ENST00000534393 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
RPUSD4-209ENST00000534393 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-209ENST00000534393 ATF3P18847 181 aa12.74□□□□□ -0.37
RPUSD4-209ENST00000534393 KIF1BO60333 1816 aa12.74□□□□□ -0.37
RPUSD4-209ENST00000534393 JCADQ9P266 1359 aa12.73□□□□□ -0.37
RPUSD4-209ENST00000534393 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
RPUSD4-209ENST00000534393 RGS17Q9UGC6 210 aaPredicted RBP12.72□□□□□ -0.37
RPUSD4-209ENST00000534393 AMOTL2Q9Y2J4 779 aa12.72□□□□□ -0.37
RPUSD4-209ENST00000534393 SETBP1Q9Y6X0 1596 aa12.72□□□□□ -0.37
RPUSD4-209ENST00000534393 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.37
RPUSD4-209ENST00000534393 PPARGC1BQ86YN6 1023 aaKnown RBP12.71□□□□□ -0.37
RPUSD4-209ENST00000534393 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.38
RPUSD4-209ENST00000534393 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
RPUSD4-209ENST00000534393 DCCP43146 1447 aa12.69□□□□□ -0.38
RPUSD4-209ENST00000534393 NRXN3Q9Y4C0 1643 aa12.69□□□□□ -0.38
RPUSD4-209ENST00000534393 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
RPUSD4-209ENST00000534393 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
RPUSD4-209ENST00000534393 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
RPUSD4-209ENST00000534393 NAIPQ13075 1403 aa12.68□□□□□ -0.38
RPUSD4-209ENST00000534393 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
RPUSD4-209ENST00000534393 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
RPUSD4-209ENST00000534393 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
RPUSD4-209ENST00000534393 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
RPUSD4-209ENST00000534393 NEXMIFQ5QGS0 1516 aa12.65□□□□□ -0.38
RPUSD4-209ENST00000534393 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
RPUSD4-209ENST00000534393 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 ZNF772Q68DY9 489 aaPredicted RBP12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 METP08581 1390 aa12.63□□□□□ -0.39
RPUSD4-209ENST00000534393 RPGRIP1LQ68CZ1 1315 aa12.62□□□□□ -0.39
RPUSD4-209ENST00000534393 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
RPUSD4-209ENST00000534393 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
RPUSD4-209ENST00000534393 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
RPUSD4-209ENST00000534393 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
RPUSD4-209ENST00000534393 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
RPUSD4-209ENST00000534393 MST1RQ04912 1400 aa12.61□□□□□ -0.39
RPUSD4-209ENST00000534393 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
RPUSD4-209ENST00000534393 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-209ENST00000534393 PPLO60437 1756 aa12.6□□□□□ -0.39
RPUSD4-209ENST00000534393 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
RPUSD4-209ENST00000534393 LRP6O75581 1613 aa12.59□□□□□ -0.39
RPUSD4-209ENST00000534393 PTCH1Q13635 1447 aa12.58□□□□□ -0.4
RPUSD4-209ENST00000534393 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
RPUSD4-209ENST00000534393 PRAG1Q86YV5 1406 aa12.56□□□□□ -0.4
RPUSD4-209ENST00000534393 LAMC1P11047 1609 aa12.55□□□□□ -0.4
RPUSD4-209ENST00000534393 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-209ENST00000534393 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-209ENST00000534393 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
RPUSD4-209ENST00000534393 RXRBP28702 533 aa12.54□□□□□ -0.4
RPUSD4-209ENST00000534393 CCDC144AA2RUR9 1427 aa12.54□□□□□ -0.4
RPUSD4-209ENST00000534393 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
RPUSD4-209ENST00000534393 ROBO2Q9HCK4 1378 aa12.53□□□□□ -0.4
RPUSD4-209ENST00000534393 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
RPUSD4-209ENST00000534393 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
RPUSD4-209ENST00000534393 AFF2P51816 1311 aa12.51□□□□□ -0.41
RPUSD4-209ENST00000534393 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
RPUSD4-209ENST00000534393 ANKRD30BQ9BXX2 1392 aa12.51□□□□□ -0.41
RPUSD4-209ENST00000534393 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
RPUSD4-209ENST00000534393 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
RPUSD4-209ENST00000534393 SOS2Q07890 1332 aaPredicted RBP12.49□□□□□ -0.41
RPUSD4-209ENST00000534393 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
RPUSD4-209ENST00000534393 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 FOXD1Q16676 465 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
RPUSD4-209ENST00000534393 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms