RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 NLRP13Q86W25 1043 aa14.99□□□□□ -0.01
AMBRA1-212ENST00000534300 LRRC9Q6ZRR7 1453 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 AMPHP49418 695 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 FAM13BQ9NYF5 915 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 APBB1O00213 710 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
AMBRA1-212ENST00000534300 SLC4A3P48751 1232 aa14.97□□□□□ -0.01
AMBRA1-212ENST00000534300 GPS2Q13227 327 aa14.97□□□□□ -0.01
AMBRA1-212ENST00000534300 MTERF4Q7Z6M4 381 aaKnown RBP14.96□□□□□ -0.01
AMBRA1-212ENST00000534300 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
AMBRA1-212ENST00000534300 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 C9orf84Q5VXU9 1444 aa14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 EPRSP07814 1512 aaKnown RBP14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 HMMRO75330 724 aa14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 TPM3P06753 285 aa14.94□□□□□ -0.02
AMBRA1-212ENST00000534300 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
AMBRA1-212ENST00000534300 ATP6V1DQ9Y5K8 247 aa14.93□□□□□ -0.02
AMBRA1-212ENST00000534300 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
AMBRA1-212ENST00000534300 U2AF1L5P0DN76 240 aaPredicted RBP14.93□□□□□ -0.02
AMBRA1-212ENST00000534300 U2AF1Q01081 240 aaKnown RBP eCLIP14.93□□□□□ -0.02
AMBRA1-212ENST00000534300 PKNOX2Q96KN3 472 aa14.92□□□□□ -0.02
AMBRA1-212ENST00000534300 SMC4Q9NTJ3 1288 aa14.92□□□□□ -0.02
AMBRA1-212ENST00000534300 CHMP5Q9NZZ3 219 aa14.92□□□□□ -0.02
AMBRA1-212ENST00000534300 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
AMBRA1-212ENST00000534300 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
AMBRA1-212ENST00000534300 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-212ENST00000534300 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
AMBRA1-212ENST00000534300 KIF3AQ9Y496 699 aa14.91□□□□□ -0.02
AMBRA1-212ENST00000534300 A0A0U1RQG5 324 aaPredicted RBP14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 RRP1P56182 461 aaKnown RBP14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 GPRASP1Q5JY77 1395 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 DCAF8L1A6NGE4 600 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 COG3Q96JB2 828 aa14.9□□□□□ -0.02
AMBRA1-212ENST00000534300 FANCAO15360 1455 aa14.89□□□□□ -0.03
AMBRA1-212ENST00000534300 GOLGA6L19H0YKK7 550 aa14.89□□□□□ -0.03
AMBRA1-212ENST00000534300 DNAJC5Q9H3Z4 198 aa14.89□□□□□ -0.03
AMBRA1-212ENST00000534300 KIF14Q15058 1648 aa14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 EXOC6Q8TAG9 804 aa14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 RRBP1Q9P2E9 1410 aaKnown RBP14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 TRIM6-TRIM34B2RNG4 842 aa14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 HDAC5Q9UQL6 1122 aa14.88□□□□□ -0.03
AMBRA1-212ENST00000534300 CGNL1Q0VF96 1302 aa14.87□□□□□ -0.03
AMBRA1-212ENST00000534300 MRE11P49959 708 aa14.87□□□□□ -0.03
AMBRA1-212ENST00000534300 BECN2A8MW95 431 aa14.87□□□□□ -0.03
AMBRA1-212ENST00000534300 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■■□□ 18.3
AMBRA1-212ENST00000534300 CCDC141Q6ZP82 1450 aa14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 GPATCH3Q96I76 525 aa14.86□□□□□ -0.03
AMBRA1-212ENST00000534300 TPM2P07951 284 aa14.85□□□□□ -0.03
AMBRA1-212ENST00000534300 RPGRIP1LQ68CZ1 1315 aa14.85□□□□□ -0.03
AMBRA1-212ENST00000534300 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
AMBRA1-212ENST00000534300 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
AMBRA1-212ENST00000534300 WDR7Q9Y4E6 1490 aa14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
AMBRA1-212ENST00000534300 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 ADAMTS12P58397 1594 aa14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 CCAR2Q8N163 923 aaKnown RBP14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 DIAPH3Q9NSV4 1193 aa14.83□□□□□ -0.04
AMBRA1-212ENST00000534300 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
AMBRA1-212ENST00000534300 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
AMBRA1-212ENST00000534300 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
AMBRA1-212ENST00000534300 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
AMBRA1-212ENST00000534300 NOM1Q5C9Z4 860 aaKnown RBP14.81□□□□□ -0.04
AMBRA1-212ENST00000534300 CCDC70Q6NSX1 233 aa14.81□□□□□ -0.04
AMBRA1-212ENST00000534300 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
AMBRA1-212ENST00000534300 NUP160Q12769 1436 aa14.81□□□□□ -0.04
AMBRA1-212ENST00000534300 NUCB2P80303 420 aa14.8□□□□□ -0.04
AMBRA1-212ENST00000534300 ZNF330Q9Y3S2 320 aaPredicted RBP14.8□□□□□ -0.04
AMBRA1-212ENST00000534300 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
AMBRA1-212ENST00000534300 SUPT6HQ7KZ85 1726 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 CALRP27797 417 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 ARGLU1Q9NWB6 273 aaPredicted RBP14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 LMOD3Q0VAK6 560 aa14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 TSR1Q2NL82 804 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 SLC26A8Q96RN1 970 aa14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 C1orf141Q5JVX7 400 aa14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 R3HCC1Q9Y3T6 440 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 CLSTN1O94985 981 aa14.79□□□□□ -0.04
AMBRA1-212ENST00000534300 PLIN1O60240 522 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms