RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 CHGAP10645 457 aaKnown RBP23.08■■□□□ 1.29
UBXN1-217ENST00000534176 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
UBXN1-217ENST00000534176 TOM1O60784 492 aa23.07■■□□□ 1.28
UBXN1-217ENST00000534176 UBAP1LF5GYI3 381 aa23.06■■□□□ 1.28
UBXN1-217ENST00000534176 BCANQ96GW7 911 aa23.05■■□□□ 1.28
UBXN1-217ENST00000534176 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
UBXN1-217ENST00000534176 KCNA6P17658 529 aa23.03■■□□□ 1.28
UBXN1-217ENST00000534176 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
UBXN1-217ENST00000534176 LRRC7Q96NW7 1537 aa23.02■■□□□ 1.28
UBXN1-217ENST00000534176 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
UBXN1-217ENST00000534176 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
UBXN1-217ENST00000534176 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
UBXN1-217ENST00000534176 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
UBXN1-217ENST00000534176 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
UBXN1-217ENST00000534176 KIF1BO60333 1816 aa22.98■■□□□ 1.27
UBXN1-217ENST00000534176 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
UBXN1-217ENST00000534176 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
UBXN1-217ENST00000534176 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
UBXN1-217ENST00000534176 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
UBXN1-217ENST00000534176 RPGRIP1LQ68CZ1 1315 aa22.95■■□□□ 1.26
UBXN1-217ENST00000534176 HRCP23327 699 aa22.94■■□□□ 1.26
UBXN1-217ENST00000534176 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
UBXN1-217ENST00000534176 NCOA3Q9Y6Q9 1424 aa22.92■■□□□ 1.26
UBXN1-217ENST00000534176 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
UBXN1-217ENST00000534176 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
UBXN1-217ENST00000534176 SETBP1Q9Y6X0 1596 aa22.91■■□□□ 1.26
UBXN1-217ENST00000534176 PROSER2Q86WR7 435 aaPredicted RBP22.9■■□□□ 1.26
UBXN1-217ENST00000534176 ADAMTS13Q76LX8 1427 aa22.9■■□□□ 1.26
UBXN1-217ENST00000534176 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
UBXN1-217ENST00000534176 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
UBXN1-217ENST00000534176 RAB3GAP2Q9H2M9 1393 aa22.88■■□□□ 1.25
UBXN1-217ENST00000534176 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
UBXN1-217ENST00000534176 SCAF1Q9H7N4 1312 aaKnown RBP22.86■■□□□ 1.25
UBXN1-217ENST00000534176 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
UBXN1-217ENST00000534176 MSH6P52701 1360 aa22.85■■□□□ 1.25
UBXN1-217ENST00000534176 PIP4K2BP78356 416 aa22.84■■□□□ 1.25
UBXN1-217ENST00000534176 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
UBXN1-217ENST00000534176 ANKRD30BQ9BXX2 1392 aa22.8■■□□□ 1.24
UBXN1-217ENST00000534176 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
UBXN1-217ENST00000534176 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
UBXN1-217ENST00000534176 FOXD1Q16676 465 aa22.78■■□□□ 1.24
UBXN1-217ENST00000534176 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
UBXN1-217ENST00000534176 AMOTL2Q9Y2J4 779 aa22.78■■□□□ 1.24
UBXN1-217ENST00000534176 PPLO60437 1756 aa22.76■■□□□ 1.23
UBXN1-217ENST00000534176 SPATA31E1Q6ZUB1 1445 aa22.76■■□□□ 1.23
UBXN1-217ENST00000534176 C19orf44Q9H6X5 657 aa22.75■■□□□ 1.23
UBXN1-217ENST00000534176 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
UBXN1-217ENST00000534176 CADPS2Q86UW7 1296 aa22.74■■□□□ 1.23
UBXN1-217ENST00000534176 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
UBXN1-217ENST00000534176 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
UBXN1-217ENST00000534176 HSPA1LP34931 641 aa22.73■■□□□ 1.23
UBXN1-217ENST00000534176 DCCP43146 1447 aa22.73■■□□□ 1.23
UBXN1-217ENST00000534176 METP08581 1390 aa22.71■■□□□ 1.23
UBXN1-217ENST00000534176 PRAG1Q86YV5 1406 aa22.71■■□□□ 1.23
UBXN1-217ENST00000534176 PTPRUQ92729 1446 aa22.71■■□□□ 1.23
UBXN1-217ENST00000534176 ATF3P18847 181 aa22.7■■□□□ 1.22
UBXN1-217ENST00000534176 STAC3Q96MF2 364 aa22.7■■□□□ 1.22
UBXN1-217ENST00000534176 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
UBXN1-217ENST00000534176 PTCH1Q13635 1447 aa22.68■■□□□ 1.22
UBXN1-217ENST00000534176 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
UBXN1-217ENST00000534176 IFT172Q9UG01 1749 aa22.66■■□□□ 1.22
UBXN1-217ENST00000534176 RBM33Q96EV2 1170 aaKnown RBP22.65■■□□□ 1.22
UBXN1-217ENST00000534176 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
UBXN1-217ENST00000534176 MYOM2P54296 1465 aa22.64■■□□□ 1.21
UBXN1-217ENST00000534176 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.63■■□□□ 1.21
UBXN1-217ENST00000534176 ROBO1Q9Y6N7 1651 aa22.63■■□□□ 1.21
UBXN1-217ENST00000534176 PIK3C2GO75747 1445 aa22.63■■□□□ 1.21
UBXN1-217ENST00000534176 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
UBXN1-217ENST00000534176 ADGRL3Q9HAR2 1447 aa22.61■■□□□ 1.21
UBXN1-217ENST00000534176 ADGRF5Q8IZF2 1346 aa22.6■■□□□ 1.21
UBXN1-217ENST00000534176 LAMC1P11047 1609 aa22.6■■□□□ 1.21
UBXN1-217ENST00000534176 NRXN1Q9ULB1 1477 aa22.59■■□□□ 1.21
UBXN1-217ENST00000534176 TECPR2O15040 1411 aa22.57■■□□□ 1.2
UBXN1-217ENST00000534176 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
UBXN1-217ENST00000534176 ABCC11Q96J66 1382 aa22.55■■□□□ 1.2
UBXN1-217ENST00000534176 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
UBXN1-217ENST00000534176 ROBO2Q9HCK4 1378 aa22.53■■□□□ 1.2
UBXN1-217ENST00000534176 SIRT1Q96EB6 747 aa22.53■■□□□ 1.2
UBXN1-217ENST00000534176 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
UBXN1-217ENST00000534176 KNDC1Q76NI1 1749 aa22.51■■□□□ 1.19
UBXN1-217ENST00000534176 MED1Q15648 1581 aaPredicted RBP22.51■■□□□ 1.19
UBXN1-217ENST00000534176 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
UBXN1-217ENST00000534176 MST1RQ04912 1400 aa22.5■■□□□ 1.19
UBXN1-217ENST00000534176 PHLPP1O60346 1717 aa22.5■■□□□ 1.19
UBXN1-217ENST00000534176 NALCNQ8IZF0 1738 aa22.5■■□□□ 1.19
UBXN1-217ENST00000534176 JCADQ9P266 1359 aa22.49■■□□□ 1.19
UBXN1-217ENST00000534176 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
UBXN1-217ENST00000534176 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
UBXN1-217ENST00000534176 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
UBXN1-217ENST00000534176 CDC42BPGQ6DT37 1551 aa22.46■■□□□ 1.19
UBXN1-217ENST00000534176 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
UBXN1-217ENST00000534176 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
UBXN1-217ENST00000534176 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
UBXN1-217ENST00000534176 CFAP70Q5T0N1 1121 aa22.43■■□□□ 1.18
UBXN1-217ENST00000534176 TMEM132EQ6IEE7 984 aa22.43■■□□□ 1.18
UBXN1-217ENST00000534176 STK26Q9P289 416 aa22.43■■□□□ 1.18
UBXN1-217ENST00000534176 C1orf167Q5SNV9 1468 aa22.42■■□□□ 1.18
UBXN1-217ENST00000534176 SPATA31A6Q5VVP1 1343 aa22.42■■□□□ 1.18
UBXN1-217ENST00000534176 DLC1Q96QB1 1528 aa22.41■■□□□ 1.18
UBXN1-217ENST00000534176 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms