RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.33
CTSB-230ENST00000534149 POTEAQ6S8J7 498 aa23.33■■□□□ 1.33
CTSB-230ENST00000534149 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
CTSB-230ENST00000534149 MSH6P52701 1360 aa23.31■■□□□ 1.32
CTSB-230ENST00000534149 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
CTSB-230ENST00000534149 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
CTSB-230ENST00000534149 ZFYVE9O95405 1425 aa23.29■■□□□ 1.32
CTSB-230ENST00000534149 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
CTSB-230ENST00000534149 CHD2O14647 1828 aaKnown RBP23.28■■□□□ 1.32
CTSB-230ENST00000534149 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
CTSB-230ENST00000534149 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
CTSB-230ENST00000534149 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.31
CTSB-230ENST00000534149 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
CTSB-230ENST00000534149 PPP1R15AO75807 674 aaPredicted RBP23.25■■□□□ 1.31
CTSB-230ENST00000534149 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
CTSB-230ENST00000534149 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
CTSB-230ENST00000534149 JCADQ9P266 1359 aa23.21■■□□□ 1.31
CTSB-230ENST00000534149 SETD1AO15047 1707 aaKnown RBP23.21■■□□□ 1.31
CTSB-230ENST00000534149 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
CTSB-230ENST00000534149 UNC13BO14795 1591 aa23.18■■□□□ 1.3
CTSB-230ENST00000534149 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
CTSB-230ENST00000534149 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
CTSB-230ENST00000534149 TBX22Q9Y458 520 aa23.17■■□□□ 1.3
CTSB-230ENST00000534149 E9PCH4 1651 aa23.16■■□□□ 1.3
CTSB-230ENST00000534149 NUTM2DQ5VT03 806 aaPredicted RBP23.16■■□□□ 1.3
CTSB-230ENST00000534149 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
CTSB-230ENST00000534149 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
CTSB-230ENST00000534149 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.14■■□□□ 1.29
CTSB-230ENST00000534149 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
CTSB-230ENST00000534149 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
CTSB-230ENST00000534149 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
CTSB-230ENST00000534149 LRP6O75581 1613 aa23.12■■□□□ 1.29
CTSB-230ENST00000534149 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
CTSB-230ENST00000534149 AHDC1Q5TGY3 1603 aaPredicted RBP23.09■■□□□ 1.29
CTSB-230ENST00000534149 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
CTSB-230ENST00000534149 PIK3R4Q99570 1358 aa23.08■■□□□ 1.29
CTSB-230ENST00000534149 SPATA31A6Q5VVP1 1343 aa23.08■■□□□ 1.28
CTSB-230ENST00000534149 ATF3P18847 181 aa23.07■■□□□ 1.28
CTSB-230ENST00000534149 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
CTSB-230ENST00000534149 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
CTSB-230ENST00000534149 TRPM2O94759 1503 aa23.07■■□□□ 1.28
CTSB-230ENST00000534149 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
CTSB-230ENST00000534149 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
CTSB-230ENST00000534149 ROCK1Q13464 1354 aa23.04■■□□□ 1.28
CTSB-230ENST00000534149 AMOTL2Q9Y2J4 779 aa23.03■■□□□ 1.28
CTSB-230ENST00000534149 NUP155O75694 1391 aa23.01■■□□□ 1.27
CTSB-230ENST00000534149 ZNF772Q68DY9 489 aaPredicted RBP23.01■■□□□ 1.27
CTSB-230ENST00000534149 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
CTSB-230ENST00000534149 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
CTSB-230ENST00000534149 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
CTSB-230ENST00000534149 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
CTSB-230ENST00000534149 DCCP43146 1447 aa22.97■■□□□ 1.27
CTSB-230ENST00000534149 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
CTSB-230ENST00000534149 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
CTSB-230ENST00000534149 ITGAEP38570 1179 aa22.96■■□□□ 1.27
CTSB-230ENST00000534149 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
CTSB-230ENST00000534149 ASXL1Q8IXJ9 1541 aa22.96■■□□□ 1.27
CTSB-230ENST00000534149 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
CTSB-230ENST00000534149 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
CTSB-230ENST00000534149 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
CTSB-230ENST00000534149 MST1RQ04912 1400 aa22.93■■□□□ 1.26
CTSB-230ENST00000534149 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
CTSB-230ENST00000534149 METP08581 1390 aa22.91■■□□□ 1.26
CTSB-230ENST00000534149 RXRBP28702 533 aa22.91■■□□□ 1.26
CTSB-230ENST00000534149 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
CTSB-230ENST00000534149 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
CTSB-230ENST00000534149 AFF2P51816 1311 aa22.88■■□□□ 1.25
CTSB-230ENST00000534149 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
CTSB-230ENST00000534149 NALCNQ8IZF0 1738 aa22.86■■□□□ 1.25
CTSB-230ENST00000534149 ADGRL3Q9HAR2 1447 aa22.86■■□□□ 1.25
CTSB-230ENST00000534149 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
CTSB-230ENST00000534149 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
CTSB-230ENST00000534149 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
CTSB-230ENST00000534149 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
CTSB-230ENST00000534149 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
CTSB-230ENST00000534149 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
CTSB-230ENST00000534149 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
CTSB-230ENST00000534149 KIF1BO60333 1816 aa22.79■■□□□ 1.24
CTSB-230ENST00000534149 RGS12O14924 1447 aa22.79■■□□□ 1.24
CTSB-230ENST00000534149 C1orf167Q5SNV9 1468 aa22.77■■□□□ 1.24
CTSB-230ENST00000534149 QTRT2Q9H974 415 aaKnown RBP22.76■■□□□ 1.23
CTSB-230ENST00000534149 RBM6P78332 1123 aaKnown RBP22.74■■□□□ 1.23
CTSB-230ENST00000534149 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
CTSB-230ENST00000534149 LAMC1P11047 1609 aa22.73■■□□□ 1.23
CTSB-230ENST00000534149 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
CTSB-230ENST00000534149 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
CTSB-230ENST00000534149 NGLY1Q96IV0 654 aa22.71■■□□□ 1.23
CTSB-230ENST00000534149 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
CTSB-230ENST00000534149 NAIPQ13075 1403 aa22.69■■□□□ 1.22
CTSB-230ENST00000534149 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
CTSB-230ENST00000534149 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
CTSB-230ENST00000534149 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
CTSB-230ENST00000534149 PPLO60437 1756 aa22.64■■□□□ 1.22
CTSB-230ENST00000534149 USP21Q9UK80 565 aa22.64■■□□□ 1.21
CTSB-230ENST00000534149 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.21
CTSB-230ENST00000534149 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
CTSB-230ENST00000534149 COL22A1Q8NFW1 1626 aaPredicted RBP22.62■■□□□ 1.21
CTSB-230ENST00000534149 ATAD2Q6PL18 1390 aa22.61■■□□□ 1.21
CTSB-230ENST00000534149 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
CTSB-230ENST00000534149 TRPC5Q9UL62 973 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms