RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RPRD2Q5VT52 1461 aaKnown RBP33.05■■■□□ 2.88
SSH3-211ENST00000534112 NKTRP30414 1462 aaKnown RBP32.99■■■□□ 2.87
SSH3-211ENST00000534112 HDGFP51858 240 aaKnown RBP32.99■■■□□ 2.87
SSH3-211ENST00000534112 ZFYVE9O95405 1425 aa32.98■■■□□ 2.87
SSH3-211ENST00000534112 PPP1R15AO75807 674 aaPredicted RBP32.97■■■□□ 2.87
SSH3-211ENST00000534112 PLEKHG1Q9ULL1 1385 aa32.96■■■□□ 2.87
SSH3-211ENST00000534112 NWD1Q149M9 1564 aa32.96■■■□□ 2.87
SSH3-211ENST00000534112 MSH6P52701 1360 aa32.96■■■□□ 2.87
SSH3-211ENST00000534112 RIMS2Q9UQ26 1411 aa32.95■■■□□ 2.87
SSH3-211ENST00000534112 SLAIN2Q9P270 581 aa32.94■■■□□ 2.86
SSH3-211ENST00000534112 ROBO1Q9Y6N7 1651 aa32.92■■■□□ 2.86
SSH3-211ENST00000534112 TBX22Q9Y458 520 aa32.91■■■□□ 2.86
SSH3-211ENST00000534112 CHGAP10645 457 aaKnown RBP32.9■■■□□ 2.86
SSH3-211ENST00000534112 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.89■■■□□ 2.86
SSH3-211ENST00000534112 POTEAQ6S8J7 498 aa32.88■■■□□ 2.85
SSH3-211ENST00000534112 TMEM131LA2VDJ0 1609 aa32.86■■■□□ 2.85
SSH3-211ENST00000534112 NUTM2DQ5VT03 806 aaPredicted RBP32.84■■■□□ 2.85
SSH3-211ENST00000534112 ROCK1Q13464 1354 aa32.83■■■□□ 2.85
SSH3-211ENST00000534112 UNC13BO14795 1591 aa32.81■■■□□ 2.84
SSH3-211ENST00000534112 MYO5BQ9ULV0 1848 aa32.81■■■□□ 2.84
SSH3-211ENST00000534112 GCC2Q8IWJ2 1684 aa32.81■■■□□ 2.84
SSH3-211ENST00000534112 CHD2O14647 1828 aaKnown RBP32.79■■■□□ 2.84
SSH3-211ENST00000534112 NCOA3Q9Y6Q9 1424 aa32.79■■■□□ 2.84
SSH3-211ENST00000534112 ADAMTS13Q76LX8 1427 aa32.78■■■□□ 2.84
SSH3-211ENST00000534112 C14orf37Q86TY3 774 aa32.78■■■□□ 2.84
SSH3-211ENST00000534112 JCADQ9P266 1359 aa32.78■■■□□ 2.84
SSH3-211ENST00000534112 NUP155O75694 1391 aa32.75■■■□□ 2.83
SSH3-211ENST00000534112 C19orf44Q9H6X5 657 aa32.74■■■□□ 2.83
SSH3-211ENST00000534112 E9PCH4 1651 aa32.74■■■□□ 2.83
SSH3-211ENST00000534112 PIK3R4Q99570 1358 aa32.73■■■□□ 2.83
SSH3-211ENST00000534112 CADPS2Q86UW7 1296 aa32.72■■■□□ 2.83
SSH3-211ENST00000534112 ITGAEP38570 1179 aa32.71■■■□□ 2.83
SSH3-211ENST00000534112 PHLPP1O60346 1717 aa32.71■■■□□ 2.83
SSH3-211ENST00000534112 IQGAP3Q86VI3 1631 aa32.69■■■□□ 2.82
SSH3-211ENST00000534112 ATF3P18847 181 aa32.69■■■□□ 2.82
SSH3-211ENST00000534112 AMOTL2Q9Y2J4 779 aa32.68■■■□□ 2.82
SSH3-211ENST00000534112 DIP2AQ14689 1571 aa32.67■■■□□ 2.82
SSH3-211ENST00000534112 COL16A1Q07092 1604 aaPredicted RBP32.62■■■□□ 2.81
SSH3-211ENST00000534112 PTPRUQ92729 1446 aa32.62■■■□□ 2.81
SSH3-211ENST00000534112 SPATA31A6Q5VVP1 1343 aa32.62■■■□□ 2.81
SSH3-211ENST00000534112 TRPM2O94759 1503 aa32.59■■■□□ 2.81
SSH3-211ENST00000534112 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.59■■■□□ 2.81
SSH3-211ENST00000534112 PPARGC1BQ86YN6 1023 aaKnown RBP32.58■■■□□ 2.81
SSH3-211ENST00000534112 BRINP3Q76B58 766 aa32.57■■■□□ 2.8
SSH3-211ENST00000534112 MEX3CQ5U5Q3 659 aaKnown RBP32.56■■■□□ 2.8
SSH3-211ENST00000534112 LRP6O75581 1613 aa32.55■■■□□ 2.8
SSH3-211ENST00000534112 ZNF326Q5BKZ1 582 aaKnown RBP32.55■■■□□ 2.8
SSH3-211ENST00000534112 AHDC1Q5TGY3 1603 aaPredicted RBP32.54■■■□□ 2.8
SSH3-211ENST00000534112 ZNF772Q68DY9 489 aaPredicted RBP32.51■■■□□ 2.79
SSH3-211ENST00000534112 DCCP43146 1447 aa32.49■■■□□ 2.79
SSH3-211ENST00000534112 METP08581 1390 aa32.48■■■□□ 2.79
SSH3-211ENST00000534112 SETBP1Q9Y6X0 1596 aa32.48■■■□□ 2.79
SSH3-211ENST00000534112 NRXN3Q9Y4C0 1643 aa32.46■■■□□ 2.79
SSH3-211ENST00000534112 NUTM2BA6NNL0 878 aaPredicted RBP32.43■■■□□ 2.78
SSH3-211ENST00000534112 NUTM2EB1AL46 878 aaPredicted RBP32.43■■■□□ 2.78
SSH3-211ENST00000534112 NUTM2AQ8IVF1 878 aaPredicted RBP32.43■■■□□ 2.78
SSH3-211ENST00000534112 XRN1Q8IZH2 1706 aaKnown RBP32.42■■■□□ 2.78
SSH3-211ENST00000534112 MST1RQ04912 1400 aa32.42■■■□□ 2.78
SSH3-211ENST00000534112 SHPRHQ149N8 1683 aa32.41■■■□□ 2.78
SSH3-211ENST00000534112 SETD1AO15047 1707 aaKnown RBP32.41■■■□□ 2.78
SSH3-211ENST00000534112 SPHKAPQ2M3C7 1700 aa32.41■■■□□ 2.78
SSH3-211ENST00000534112 TRIM52Q96A61 297 aa32.4■■■□□ 2.78
SSH3-211ENST00000534112 ASXL1Q8IXJ9 1541 aa32.4■■■□□ 2.78
SSH3-211ENST00000534112 SETD5Q9C0A6 1442 aa32.38■■■□□ 2.77
SSH3-211ENST00000534112 LRRC59Q96AG4 307 aaKnown RBP32.37■■■□□ 2.77
SSH3-211ENST00000534112 RXRBP28702 533 aa32.36■■■□□ 2.77
SSH3-211ENST00000534112 ADGRL3Q9HAR2 1447 aa32.34■■■□□ 2.77
SSH3-211ENST00000534112 UPF1Q92900 1129 aaKnown RBP eCLIP32.34■■■□□ 2.77
SSH3-211ENST00000534112 NEXMIFQ5QGS0 1516 aa32.33■■■□□ 2.77
SSH3-211ENST00000534112 DDX17Q92841 729 aaKnown RBP32.33■■■□□ 2.77
SSH3-211ENST00000534112 CLTCL1P53675 1640 aa32.33■■■□□ 2.77
SSH3-211ENST00000534112 NAIPQ13075 1403 aa32.31■■■□□ 2.76
SSH3-211ENST00000534112 AFF2P51816 1311 aa32.3■■■□□ 2.76
SSH3-211ENST00000534112 RRBP1Q9P2E9 1410 aaKnown RBP32.29■■■□□ 2.76
SSH3-211ENST00000534112 VGFO15240 615 aaPredicted RBP32.28■■■□□ 2.76
SSH3-211ENST00000534112 NHSL1Q5SYE7 1610 aa32.25■■■□□ 2.75
SSH3-211ENST00000534112 PNPLA6Q8IY17 1366 aa32.24■■■□□ 2.75
SSH3-211ENST00000534112 C8orf37Q96NL8 207 aa32.23■■■□□ 2.75
SSH3-211ENST00000534112 C1orf167Q5SNV9 1468 aa32.23■■■□□ 2.75
SSH3-211ENST00000534112 CDK12Q9NYV4 1490 aaPredicted RBP32.22■■■□□ 2.75
SSH3-211ENST00000534112 ROBO2Q9HCK4 1378 aa32.2■■■□□ 2.75
SSH3-211ENST00000534112 PTCH1Q13635 1447 aa32.2■■■□□ 2.75
SSH3-211ENST00000534112 RPGRIP1LQ68CZ1 1315 aa32.2■■■□□ 2.74
SSH3-211ENST00000534112 QTRT2Q9H974 415 aaKnown RBP32.19■■■□□ 2.74
SSH3-211ENST00000534112 NALCNQ8IZF0 1738 aa32.18■■■□□ 2.74
SSH3-211ENST00000534112 SLC4A1APQ9BWU0 796 aaKnown RBP32.18■■■□□ 2.74
SSH3-211ENST00000534112 ORAI2Q96SN7 254 aa32.17■■■□□ 2.74
SSH3-211ENST00000534112 KIF1BO60333 1816 aa32.16■■■□□ 2.74
SSH3-211ENST00000534112 RBM6P78332 1123 aaKnown RBP32.15■■■□□ 2.74
SSH3-211ENST00000534112 ADAMTS2O95450 1211 aa32.14■■■□□ 2.74
SSH3-211ENST00000534112 SOS2Q07890 1332 aaPredicted RBP32.14■■■□□ 2.74
SSH3-211ENST00000534112 HFM1A2PYH4 1435 aa32.14■■■□□ 2.74
SSH3-211ENST00000534112 NGLY1Q96IV0 654 aa32.13■■■□□ 2.73
SSH3-211ENST00000534112 PRAG1Q86YV5 1406 aa32.11■■■□□ 2.73
SSH3-211ENST00000534112 RGS12O14924 1447 aa32.07■■■□□ 2.72
SSH3-211ENST00000534112 LAMC1P11047 1609 aa32.05■■■□□ 2.72
SSH3-211ENST00000534112 FOXD1Q16676 465 aa32.05■■■□□ 2.72
SSH3-211ENST00000534112 USP21Q9UK80 565 aa32.01■■■□□ 2.71
SSH3-211ENST00000534112 ESCO1Q5FWF5 840 aa32■■■□□ 2.71
SSH3-211ENST00000534112 ADGRF5Q8IZF2 1346 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms